RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 CCSO14618 274 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 DEDDO75618 318 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 OR2J3O76001 311 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 IFNA4P05014 189 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 REG1AP05451 166 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 GIPP09681 153 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 OR8U8P0C7N1 319 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 APELAP0DMC3 54 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 ZP3P21754 424 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 P2RY1P47900 373 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 MFAP4P55083 255 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 H2BFSP57053 126 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 KRTAP10-3P60369 221 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 POLR2GP62487 172 aaKnown RBP eCLIP4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 FCN2Q15485 313 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 ODF3L2Q3SX64 289 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 C10orf99Q6UWK7 81 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 TMEM14EPQ6UXP3 125 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 Q8N9P0 234 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 KLHL30-AS1Q8NEE0 82 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 PPP1R1CQ8WVI7 109 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 DCUN1D4Q92564 292 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 BSCL2Q96G97 398 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 MS4A10Q96PG2 267 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 GGACTQ9BVM4 153 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 ZNF436Q9C0F3 470 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 SLC25A31Q9H0C2 315 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 C21orf62Q9NYP8 219 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 PSENENQ9NZ42 101 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 PEF1Q9UBV8 284 aaKnown RBP4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 RCL1Q9Y2P8 373 aaKnown RBP4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 LSM5Q9Y4Y9 91 aaKnown RBP4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 C15orf62A8K5M9 175 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 LINC01619G3V211 115 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 K7EIM0 57 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 SSSCA1O60232 199 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 GGCTO75223 188 aaKnown RBP4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 CLN5O75503 358 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 NDUFB8O95169 186 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 SIX6O95475 246 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 MPC2O95563 127 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 MT-CO2P00403 227 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 PRH1P02810 166 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 IAPPP10997 89 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 CXCL3P19876 107 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 OPRK1P41145 380 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 MFAP2P55001 183 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 S100A10P60903 97 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 HBG1P69891 147 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 HBG2P69892 147 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 RELQ04864 619 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 BAXQ07812 192 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 ZNF616Q08AN1 781 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 ATP6V1FQ16864 119 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 SPINK9Q5DT21 86 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 SPANXN5Q5MJ07 72 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 PRSS54Q6PEW0 395 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 STX12Q86Y82 276 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 OR11H7Q8NGC8 314 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 OR10P1Q8NGE3 313 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 OR1N2Q8NGR9 330 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 OR4X1Q8NH49 305 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 THAP6Q8TBB0 222 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 ZNF502Q8TBZ5 544 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 PINX1Q96BK5 328 aaKnown RBP4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 SLC35E1Q96K37 410 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 MAGT1Q9H0U3 335 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 C11orf1Q9H5F2 150 aa4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 LYRM2Q9NU23 88 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P44-201ENST00000508597 MGAM2Q2M2H8 2515 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 SORL1Q92673 2214 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 CCL24O00175 119 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 LGALS9O00182 355 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 NUPL2O15504 423 aaKnown RBP4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 TGOLN2O43493 480 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 GNG7O60262 68 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 TMEM50AO95807 157 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 CFDP00746 253 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 IGHV3-11P01762 117 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 FABP1P07148 127 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 S100A7P31151 101 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 S100A11P31949 105 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 NUP62P37198 522 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 SULT1A1P50225 295 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 BCAP31P51572 246 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 CAV2P51636 162 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 PAX9P55771 341 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 DLK1P80370 383 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 RPEL1Q2QD12 228 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 NSUN5P1Q3KNT7 163 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 FAM106AQ4KMX7 169 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 PXDC1Q5TGL8 231 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 C16orf54Q6UWD8 224 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 SLC16A13Q7RTY0 426 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 TMEM144Q7Z5S9 345 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 GPHB5Q86YW7 130 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 TMEM252Q8N6L7 170 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 WFDC9Q8NEX5 89 aa4.2□□□□□ -1.74
HMGB1P44-201ENST00000508597 OR11H1Q8NG94 326 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms