RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 PSMG4Q5JS54 123 aa9.43□□□□□ -0.9
HMGCS1-205ENST00000508319 NOXA1Q86UR1 476 aa9.43□□□□□ -0.9
HMGCS1-205ENST00000508319 LGI3Q8N145 548 aa9.43□□□□□ -0.9
HMGCS1-205ENST00000508319 CSNK1G2-AS1Q8NCQ2 148 aa9.43□□□□□ -0.9
HMGCS1-205ENST00000508319 KCNIP3Q9Y2W7 256 aa9.43□□□□□ -0.9
HMGCS1-205ENST00000508319 U3KQ87 197 aa9.43□□□□□ -0.9
HMGCS1-205ENST00000508319 X6R8D5 127 aa9.43□□□□□ -0.9
HMGCS1-205ENST00000508319 RD3LP0DJH9 198 aa9.42□□□□□ -0.9
HMGCS1-205ENST00000508319 PSG1P11464 419 aa9.42□□□□□ -0.9
HMGCS1-205ENST00000508319 TNFSF8P32971 234 aa9.42□□□□□ -0.9
HMGCS1-205ENST00000508319 AP2S1P53680 142 aaPredicted RBP9.42□□□□□ -0.9
HMGCS1-205ENST00000508319 C2CD4CQ8TF44 421 aa9.42□□□□□ -0.9
HMGCS1-205ENST00000508319 TRIM63Q969Q1 353 aa9.42□□□□□ -0.9
HMGCS1-205ENST00000508319 RNF125Q96EQ8 232 aa9.42□□□□□ -0.9
HMGCS1-205ENST00000508319 SCGB3A2Q96PL1 93 aa9.42□□□□□ -0.9
HMGCS1-205ENST00000508319 RAB40CQ96S21 281 aa9.42□□□□□ -0.9
HMGCS1-205ENST00000508319 RBKSQ9H477 322 aa9.42□□□□□ -0.9
HMGCS1-205ENST00000508319 NRN1Q9NPD7 142 aa9.42□□□□□ -0.9
HMGCS1-205ENST00000508319 CLEC5AQ9NY25 188 aa9.42□□□□□ -0.9
HMGCS1-205ENST00000508319 IGKV1D-37A0A075B6S9 117 aa9.41□□□□□ -0.9
HMGCS1-205ENST00000508319 FABP12A6NFH5 140 aa9.41□□□□□ -0.9
HMGCS1-205ENST00000508319 SNRPD3P62318 126 aaKnown RBP9.41□□□□□ -0.9
HMGCS1-205ENST00000508319 SRPXP78539 464 aa9.41□□□□□ -0.9
HMGCS1-205ENST00000508319 PRR20EP86478 221 aa9.41□□□□□ -0.9
HMGCS1-205ENST00000508319 PRR20CP86479 221 aa9.41□□□□□ -0.9
HMGCS1-205ENST00000508319 PRR20DP86480 221 aa9.41□□□□□ -0.9
HMGCS1-205ENST00000508319 PRR20BP86481 221 aa9.41□□□□□ -0.9
HMGCS1-205ENST00000508319 PRR20AP86496 221 aa9.41□□□□□ -0.9
HMGCS1-205ENST00000508319 KLF9Q13886 244 aaPredicted RBP9.41□□□□□ -0.9
HMGCS1-205ENST00000508319 SIGLEC15Q6ZMC9 328 aa9.41□□□□□ -0.9
HMGCS1-205ENST00000508319 OR51G1Q8NGK1 321 aa9.41□□□□□ -0.9
HMGCS1-205ENST00000508319 SEPSECSQ9HD40 501 aaKnown RBP9.41□□□□□ -0.9
HMGCS1-205ENST00000508319 TBC1D24Q9ULP9 559 aa9.41□□□□□ -0.9
HMGCS1-205ENST00000508319 ELOA3CA0A087WX78 387 aaPredicted RBP9.4□□□□□ -0.9
HMGCS1-205ENST00000508319 C11orf94C9JXX5 98 aa9.4□□□□□ -0.9
HMGCS1-205ENST00000508319 NOL3O60936 208 aaKnown RBP9.4□□□□□ -0.9
HMGCS1-205ENST00000508319 ANXA3P12429 323 aa9.4□□□□□ -0.9
HMGCS1-205ENST00000508319 TCTAP57738 103 aa9.4□□□□□ -0.9
HMGCS1-205ENST00000508319 Q6ZTC4 211 aa9.4□□□□□ -0.9
HMGCS1-205ENST00000508319 MCFD2Q8NI22 146 aa9.4□□□□□ -0.9
HMGCS1-205ENST00000508319 IGLL5B9A064 214 aa9.39□□□□□ -0.91
HMGCS1-205ENST00000508319 H3BMM0 161 aa9.39□□□□□ -0.91
HMGCS1-205ENST00000508319 PITX3O75364 302 aa9.39□□□□□ -0.91
HMGCS1-205ENST00000508319 HLA-DMBP28068 263 aa9.39□□□□□ -0.91
HMGCS1-205ENST00000508319 GPX4P36969 197 aaPredicted RBP9.39□□□□□ -0.91
HMGCS1-205ENST00000508319 ATP5IP56385 69 aaPredicted RBP9.39□□□□□ -0.91
HMGCS1-205ENST00000508319 ZNF90Q03938 601 aa9.39□□□□□ -0.91
HMGCS1-205ENST00000508319 GAMTQ14353 236 aa9.39□□□□□ -0.91
HMGCS1-205ENST00000508319 OR8G2PQ6IF36 304 aa9.39□□□□□ -0.91
HMGCS1-205ENST00000508319 OR1S1Q8NH92 325 aa9.39□□□□□ -0.91
HMGCS1-205ENST00000508319 APLNQ9ULZ1 77 aa9.39□□□□□ -0.91
HMGCS1-205ENST00000508319 CELA1Q9UNI1 258 aa9.39□□□□□ -0.91
HMGCS1-205ENST00000508319 V9GYH0 126 aa9.39□□□□□ -0.91
HMGCS1-205ENST00000508319 DUXBA0A1W2PPF3 345 aa9.38□□□□□ -0.91
HMGCS1-205ENST00000508319 ZFP92A6NM28 416 aa9.38□□□□□ -0.91
HMGCS1-205ENST00000508319 HLA-DRB4P13762 266 aa9.38□□□□□ -0.91
HMGCS1-205ENST00000508319 FAUP35544 74 aaKnown RBP9.38□□□□□ -0.91
HMGCS1-205ENST00000508319 NUP62P37198 522 aaPredicted RBP9.38□□□□□ -0.91
HMGCS1-205ENST00000508319 ZNF79Q15937 498 aa9.38□□□□□ -0.91
HMGCS1-205ENST00000508319 TMEM128Q5BJH2 165 aa9.38□□□□□ -0.91
HMGCS1-205ENST00000508319 TMED4Q7Z7H5 227 aa9.38□□□□□ -0.91
HMGCS1-205ENST00000508319 LRTM2Q8N967 370 aa9.38□□□□□ -0.91
HMGCS1-205ENST00000508319 PBDC1Q9BVG4 233 aa9.38□□□□□ -0.91
HMGCS1-205ENST00000508319 WDR12Q9GZL7 423 aaKnown RBP9.38□□□□□ -0.91
HMGCS1-205ENST00000508319 XCL2Q9UBD3 114 aa9.38□□□□□ -0.91
HMGCS1-205ENST00000508319 HLA-DRB4X5D2U9 266 aa9.38□□□□□ -0.91
HMGCS1-205ENST00000508319 DNAH2Q9P225 4427 aa9.38□□□□□ -0.91
HMGCS1-205ENST00000508319 IGKV1OR2-108A0A075B7D4 117 aa9.37□□□□□ -0.91
HMGCS1-205ENST00000508319 PIGBOS1A0A0B4J2F0 54 aa9.37□□□□□ -0.91
HMGCS1-205ENST00000508319 SOCS3O14543 225 aa9.37□□□□□ -0.91
HMGCS1-205ENST00000508319 IAPPP10997 89 aa9.37□□□□□ -0.91
HMGCS1-205ENST00000508319 SLC25A6P12236 298 aa9.37□□□□□ -0.91
HMGCS1-205ENST00000508319 NKX2-1P43699 371 aaPredicted RBP9.37□□□□□ -0.91
HMGCS1-205ENST00000508319 DEFB1P60022 68 aa9.37□□□□□ -0.91
HMGCS1-205ENST00000508319 NUTF2P61970 127 aaKnown RBP9.37□□□□□ -0.91
HMGCS1-205ENST00000508319 GDF5OSQ5U4N7 250 aa9.37□□□□□ -0.91
HMGCS1-205ENST00000508319 TOMM5Q8N4H5 51 aa9.37□□□□□ -0.91
HMGCS1-205ENST00000508319 SLC35E1Q96K37 410 aa9.37□□□□□ -0.91
HMGCS1-205ENST00000508319 C1QTNF4Q9BXJ3 329 aa9.37□□□□□ -0.91
HMGCS1-205ENST00000508319 FAT2Q9NYQ8 4349 aa9.37□□□□□ -0.91
HMGCS1-205ENST00000508319 TRAV10A0A0B4J240 114 aa9.36□□□□□ -0.91
HMGCS1-205ENST00000508319 AP3S2P59780 193 aa9.36□□□□□ -0.91
HMGCS1-205ENST00000508319 LYZP61626 148 aa9.36□□□□□ -0.91
HMGCS1-205ENST00000508319 PYDC2Q56P42 97 aa9.36□□□□□ -0.91
HMGCS1-205ENST00000508319 TRGV9Q99603 122 aa9.36□□□□□ -0.91
HMGCS1-205ENST00000508319 IGHV4-4A0A075B6R2 117 aa9.35□□□□□ -0.91
HMGCS1-205ENST00000508319 PRSS46E5RG02 174 aa9.35□□□□□ -0.91
HMGCS1-205ENST00000508319 AMBPP02760 352 aa9.35□□□□□ -0.91
HMGCS1-205ENST00000508319 FABP1P07148 127 aa9.35□□□□□ -0.91
HMGCS1-205ENST00000508319 PSMB3P49720 205 aa9.35□□□□□ -0.91
HMGCS1-205ENST00000508319 RAB11AP62491 216 aa9.35□□□□□ -0.91
HMGCS1-205ENST00000508319 PPP1R1AQ13522 171 aa9.35□□□□□ -0.91
HMGCS1-205ENST00000508319 OR2F1Q13607 317 aa9.35□□□□□ -0.91
HMGCS1-205ENST00000508319 C12orf74Q32Q52 190 aa9.35□□□□□ -0.91
HMGCS1-205ENST00000508319 C4orf48Q5BLP8 95 aa9.35□□□□□ -0.91
HMGCS1-205ENST00000508319 C1orf194Q5T5A4 169 aa9.35□□□□□ -0.91
HMGCS1-205ENST00000508319 GSG1LQ6UXU4 331 aa9.35□□□□□ -0.91
HMGCS1-205ENST00000508319 ZNF705AQ6ZN79 300 aaPredicted RBP9.35□□□□□ -0.91
HMGCS1-205ENST00000508319 ZNF709Q8N972 641 aa9.35□□□□□ -0.91
HMGCS1-205ENST00000508319 THAP8Q8NA92 274 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms