RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 KIF24Q5T7B8 1368 aa1.92□□□□□ -2.1
TRAPPC13-209ENST00000508304 MED1Q15648 1581 aaPredicted RBP1.91□□□□□ -2.1
TRAPPC13-209ENST00000508304 PXDNLA1KZ92 1463 aa1.91□□□□□ -2.1
TRAPPC13-209ENST00000508304 IGKV1-9A0A0C4DH69 117 aa1.91□□□□□ -2.1
TRAPPC13-209ENST00000508304 TMEM256-PLSCR3K7ERE1 68 aa1.91□□□□□ -2.1
TRAPPC13-209ENST00000508304 OR2T1O43869 369 aa1.91□□□□□ -2.1
TRAPPC13-209ENST00000508304 PROSCO94903 275 aa1.91□□□□□ -2.1
TRAPPC13-209ENST00000508304 NAPSAO96009 420 aa1.91□□□□□ -2.1
TRAPPC13-209ENST00000508304 TRGC2P03986 189 aa1.91□□□□□ -2.1
TRAPPC13-209ENST00000508304 CSN2P05814 226 aa1.91□□□□□ -2.1
TRAPPC13-209ENST00000508304 MGST1P10620 155 aaKnown RBP1.91□□□□□ -2.1
TRAPPC13-209ENST00000508304 FKBP2P26885 142 aaKnown RBP1.91□□□□□ -2.1
TRAPPC13-209ENST00000508304 NNATQ16517 81 aa1.91□□□□□ -2.1
TRAPPC13-209ENST00000508304 BRMS1LQ5PSV4 323 aa1.91□□□□□ -2.1
TRAPPC13-209ENST00000508304 C22orf39Q6P5X5 142 aa1.91□□□□□ -2.1
TRAPPC13-209ENST00000508304 RPS19BP1Q86WX3 136 aaKnown RBP1.91□□□□□ -2.1
TRAPPC13-209ENST00000508304 OR13D1Q8NGV5 346 aa1.91□□□□□ -2.1
TRAPPC13-209ENST00000508304 ADAT1Q9BUB4 502 aaKnown RBP1.91□□□□□ -2.1
TRAPPC13-209ENST00000508304 NPCDR1Q9BY65 106 aa1.91□□□□□ -2.1
TRAPPC13-209ENST00000508304 CXCL16Q9H2A7 254 aa1.91□□□□□ -2.1
TRAPPC13-209ENST00000508304 TMEM133Q9H2Q1 129 aa1.91□□□□□ -2.1
TRAPPC13-209ENST00000508304 BATF3Q9NR55 127 aa1.91□□□□□ -2.1
TRAPPC13-209ENST00000508304 TAS2R4Q9NYW5 299 aa1.91□□□□□ -2.1
TRAPPC13-209ENST00000508304 HSPB11Q9Y547 144 aa1.91□□□□□ -2.1
TRAPPC13-209ENST00000508304 TLCD2A6NGC4 264 aa1.9□□□□□ -2.11
TRAPPC13-209ENST00000508304 ZNF705FA8MVS1 300 aaPredicted RBP1.9□□□□□ -2.11
TRAPPC13-209ENST00000508304 FAM107AO95990 144 aa1.9□□□□□ -2.11
TRAPPC13-209ENST00000508304 CRPP02741 224 aa1.9□□□□□ -2.11
TRAPPC13-209ENST00000508304 LTC4SQ16873 150 aa1.9□□□□□ -2.11
TRAPPC13-209ENST00000508304 TMEM78Q5T7P6 136 aa1.9□□□□□ -2.11
TRAPPC13-209ENST00000508304 SOSTDC1Q6X4U4 206 aa1.9□□□□□ -2.11
TRAPPC13-209ENST00000508304 PHF13Q86YI8 300 aaPredicted RBP1.9□□□□□ -2.11
TRAPPC13-209ENST00000508304 ADAT3Q96EY9 351 aaPredicted RBP1.9□□□□□ -2.11
TRAPPC13-209ENST00000508304 AIF1LQ9BQI0 150 aa1.9□□□□□ -2.11
TRAPPC13-209ENST00000508304 SLC25A21Q9BQT8 299 aaPredicted RBP1.9□□□□□ -2.11
TRAPPC13-209ENST00000508304 SLC50A1Q9BRV3 221 aa1.9□□□□□ -2.11
TRAPPC13-209ENST00000508304 EFCAB11Q9BUY7 163 aa1.9□□□□□ -2.11
TRAPPC13-209ENST00000508304 MRPL32Q9BYC8 188 aaKnown RBP1.9□□□□□ -2.11
TRAPPC13-209ENST00000508304 C19orf12Q9NSK7 152 aa1.9□□□□□ -2.11
TRAPPC13-209ENST00000508304 LAMTOR2Q9Y2Q5 125 aa1.9□□□□□ -2.11
TRAPPC13-209ENST00000508304 NDUFAF1Q9Y375 327 aa1.9□□□□□ -2.11
TRAPPC13-209ENST00000508304 MALRD1Q5VYJ5 2156 aa1.9□□□□□ -2.11
TRAPPC13-209ENST00000508304 ZNF106Q9H2Y7 1883 aaKnown RBP1.9□□□□□ -2.11
TRAPPC13-209ENST00000508304 MPDZO75970 2070 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 IGKV1D-42A0A075B6H8 117 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 TRAV1-1A0A0B4J248 108 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 TIMM17BO60830 172 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 SHBGP04278 402 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 GPX1P07203 203 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 ASAH2BP0C7U1 165 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 FUSP35637 526 aaKnown RBP eCLIP1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 DYNLT3P51808 116 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 TMBIM6P55061 237 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 DYNLT1P63172 113 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 RTL8BQ17RB0 113 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 TMEM128Q5BJH2 165 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 FKBP1CQ5VVH2 108 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 Q6ZQT0 140 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 PDZD9Q8IXQ8 264 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 LINC00301Q8NCQ3 95 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 TMEM35BQ8NCS4 154 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 NUP35Q8NFH5 326 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 RNASE11Q8TAA1 199 aaKnown RBP1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 ISOC1Q96CN7 298 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 BORCS8Q96FH0 119 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 GPX7Q96SL4 187 aaPredicted RBP1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 HSPB9Q9BQS6 159 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 RTL8AQ9BWD3 113 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 POPDC3Q9HBV1 291 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 BCL2L10Q9HD36 194 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 TMEM106BQ9NUM4 274 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 OR52A1Q9UKL2 312 aa1.89□□□□□ -2.11
TRAPPC13-209ENST00000508304 CAMSAP2Q08AD1 1489 aa1.88□□□□□ -2.11
TRAPPC13-209ENST00000508304 TRAV3A0A0B4J244 114 aa1.88□□□□□ -2.11
TRAPPC13-209ENST00000508304 A0A1W2PRE2 83 aa1.88□□□□□ -2.11
TRAPPC13-209ENST00000508304 IBA57-AS1B1ANH7 110 aa1.88□□□□□ -2.11
TRAPPC13-209ENST00000508304 M0R378 163 aa1.88□□□□□ -2.11
TRAPPC13-209ENST00000508304 ZNF737O75373 536 aa1.88□□□□□ -2.11
TRAPPC13-209ENST00000508304 CST7O76096 145 aa1.88□□□□□ -2.11
TRAPPC13-209ENST00000508304 C1QCP02747 245 aa1.88□□□□□ -2.11
TRAPPC13-209ENST00000508304 CLPSP04118 112 aa1.88□□□□□ -2.11
TRAPPC13-209ENST00000508304 IFNA4P05014 189 aa1.88□□□□□ -2.11
TRAPPC13-209ENST00000508304 ZNF705BP0CI00 300 aaPredicted RBP1.88□□□□□ -2.11
TRAPPC13-209ENST00000508304 RNASE4P34096 147 aaKnown RBP1.88□□□□□ -2.11
TRAPPC13-209ENST00000508304 AKR1C3P42330 323 aa1.88□□□□□ -2.11
TRAPPC13-209ENST00000508304 RNASE10Q5GAN6 216 aaKnown RBP1.88□□□□□ -2.11
TRAPPC13-209ENST00000508304 ZNF826PQ6ZT77 177 aa1.88□□□□□ -2.11
TRAPPC13-209ENST00000508304 OR4K15Q8NH41 348 aa1.88□□□□□ -2.11
TRAPPC13-209ENST00000508304 TEX37Q96LM6 180 aa1.88□□□□□ -2.11
TRAPPC13-209ENST00000508304 LINC00467Q9BRT7 94 aa1.88□□□□□ -2.11
TRAPPC13-209ENST00000508304 PTPRBP23467 1997 aa1.87□□□□□ -2.11
TRAPPC13-209ENST00000508304 TRAV14DV4A0A0A6YYC5 116 aa1.87□□□□□ -2.11
TRAPPC13-209ENST00000508304 ODAMA1E959 279 aa1.87□□□□□ -2.11
TRAPPC13-209ENST00000508304 ARL5CA6NH57 179 aa1.87□□□□□ -2.11
TRAPPC13-209ENST00000508304 GADD45GO95257 159 aa1.87□□□□□ -2.11
TRAPPC13-209ENST00000508304 CTSDP07339 412 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-209ENST00000508304 BAALC-AS2P0C853 105 aa1.87□□□□□ -2.11
TRAPPC13-209ENST00000508304 HLA-EP13747 358 aa1.87□□□□□ -2.11
TRAPPC13-209ENST00000508304 PLCXD2Q0VAA5 305 aa1.87□□□□□ -2.11
TRAPPC13-209ENST00000508304 SURF2Q15527 256 aaPredicted RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms