RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 TMEM177Q53S58 311 aa10.79□□□□□ -0.68
SNCAIP-209ENST00000508017 TIMM23BQ5SRD1 257 aa10.79□□□□□ -0.68
SNCAIP-209ENST00000508017 THAP8Q8NA92 274 aa10.79□□□□□ -0.68
SNCAIP-209ENST00000508017 TMEM167AQ8TBQ9 72 aa10.79□□□□□ -0.68
SNCAIP-209ENST00000508017 CHRDL1Q9BU40 450 aa10.79□□□□□ -0.68
SNCAIP-209ENST00000508017 RPP21Q9H633 154 aaKnown RBP10.79□□□□□ -0.68
SNCAIP-209ENST00000508017 TRAV17A0A0B4J275 112 aa10.79□□□□□ -0.68
SNCAIP-209ENST00000508017 FBLN7Q53RD9 439 aa10.79□□□□□ -0.68
SNCAIP-209ENST00000508017 Q71RC1 249 aaPredicted RBP10.79□□□□□ -0.68
SNCAIP-209ENST00000508017 RITA1Q96K30 269 aa10.79□□□□□ -0.68
SNCAIP-209ENST00000508017 MCRIP2Q9BUT9 160 aaKnown RBP10.79□□□□□ -0.68
SNCAIP-209ENST00000508017 MLST8Q9BVC4 326 aa10.79□□□□□ -0.68
SNCAIP-209ENST00000508017 LINC00312Q9Y6C7 94 aa10.79□□□□□ -0.68
SNCAIP-209ENST00000508017 TNFSF4P23510 183 aa10.78□□□□□ -0.68
SNCAIP-209ENST00000508017 CCL8P80075 99 aa10.78□□□□□ -0.68
SNCAIP-209ENST00000508017 MPV17L2Q567V2 206 aa10.78□□□□□ -0.68
SNCAIP-209ENST00000508017 GUCD1Q96NT3 240 aa10.78□□□□□ -0.68
SNCAIP-209ENST00000508017 GPR82Q96P67 336 aa10.78□□□□□ -0.68
SNCAIP-209ENST00000508017 ABCA1O95477 2261 aa10.78□□□□□ -0.68
SNCAIP-209ENST00000508017 IGHV3-21A0A0B4J1V1 117 aa10.78□□□□□ -0.68
SNCAIP-209ENST00000508017 A0A1W2PPI3 338 aa10.78□□□□□ -0.68
SNCAIP-209ENST00000508017 MBD3L4A6NDZ8 208 aaPredicted RBP10.78□□□□□ -0.68
SNCAIP-209ENST00000508017 MBD3L3A6NE82 208 aaPredicted RBP10.78□□□□□ -0.68
SNCAIP-209ENST00000508017 MBD3L5A6NJ08 208 aaPredicted RBP10.78□□□□□ -0.68
SNCAIP-209ENST00000508017 INS-IGF2F8WCM5 200 aa10.78□□□□□ -0.68
SNCAIP-209ENST00000508017 SYS1-DBNDD2H3BUS1 97 aa10.78□□□□□ -0.68
SNCAIP-209ENST00000508017 IGLV2-23P01705 113 aa10.78□□□□□ -0.68
SNCAIP-209ENST00000508017 SP9P0CG40 484 aa10.78□□□□□ -0.68
SNCAIP-209ENST00000508017 APELAP0DMC3 54 aa10.78□□□□□ -0.68
SNCAIP-209ENST00000508017 ZNF138P52744 262 aa10.78□□□□□ -0.68
SNCAIP-209ENST00000508017 PLA2G2CQ5R387 149 aa10.78□□□□□ -0.68
SNCAIP-209ENST00000508017 HCP5Q6MZN7 132 aa10.78□□□□□ -0.68
SNCAIP-209ENST00000508017 ZCCHC24Q8N2G6 241 aaKnown RBP10.78□□□□□ -0.68
SNCAIP-209ENST00000508017 MBD3L2Q8NHZ7 208 aaPredicted RBP10.78□□□□□ -0.68
SNCAIP-209ENST00000508017 KLF12Q9Y4X4 402 aa10.78□□□□□ -0.68
SNCAIP-209ENST00000508017 CEACAM8P31997 349 aaPredicted RBP10.77□□□□□ -0.68
SNCAIP-209ENST00000508017 IGFL2Q6UWQ7 119 aa10.77□□□□□ -0.68
SNCAIP-209ENST00000508017 LOXL4Q96JB6 756 aa10.77□□□□□ -0.68
SNCAIP-209ENST00000508017 PRSS22Q9GZN4 317 aa10.77□□□□□ -0.68
SNCAIP-209ENST00000508017 IGHV2-70DA0A0C4DH43 119 aa10.77□□□□□ -0.69
SNCAIP-209ENST00000508017 SLC25A17O43808 307 aa10.77□□□□□ -0.69
SNCAIP-209ENST00000508017 NBEAP1P0C6P0 100 aa10.77□□□□□ -0.69
SNCAIP-209ENST00000508017 FAM87AP0C7U9 286 aa10.77□□□□□ -0.69
SNCAIP-209ENST00000508017 TMEM30BQ3MIR4 351 aa10.77□□□□□ -0.69
SNCAIP-209ENST00000508017 TEX36Q5VZQ5 186 aa10.77□□□□□ -0.69
SNCAIP-209ENST00000508017 OR4C13Q8NGP0 309 aa10.77□□□□□ -0.69
SNCAIP-209ENST00000508017 PERPQ96FX8 193 aa10.77□□□□□ -0.69
SNCAIP-209ENST00000508017 SSUH2Q9Y2M2 353 aa10.77□□□□□ -0.69
SNCAIP-209ENST00000508017 MGAQ8IWI9 3026 aa10.77□□□□□ -0.69
SNCAIP-209ENST00000508017 C19orf71A6NCJ1 209 aa10.76□□□□□ -0.69
SNCAIP-209ENST00000508017 CRXO43186 299 aaPredicted RBP10.76□□□□□ -0.69
SNCAIP-209ENST00000508017 P01737 135 aa10.76□□□□□ -0.69
SNCAIP-209ENST00000508017 TMEM200BQ69YZ2 307 aa10.76□□□□□ -0.69
SNCAIP-209ENST00000508017 OR10X1Q8NGY0 326 aa10.76□□□□□ -0.69
SNCAIP-209ENST00000508017 GAL3ST2Q9H3Q3 398 aa10.76□□□□□ -0.69
SNCAIP-209ENST00000508017 GSX1Q9H4S2 264 aaPredicted RBP10.76□□□□□ -0.69
SNCAIP-209ENST00000508017 ZZEF1O43149 2961 aa10.76□□□□□ -0.69
SNCAIP-209ENST00000508017 CEP250Q9BV73 2442 aa10.76□□□□□ -0.69
SNCAIP-209ENST00000508017 TRAV8-1A0A0A6YYK1 113 aa10.76□□□□□ -0.69
SNCAIP-209ENST00000508017 A8MWL6 223 aa10.76□□□□□ -0.69
SNCAIP-209ENST00000508017 K7EP13 123 aa10.76□□□□□ -0.69
SNCAIP-209ENST00000508017 LEPROTL1O95214 131 aa10.76□□□□□ -0.69
SNCAIP-209ENST00000508017 SUB1P53999 127 aaKnown RBP eCLIP10.76□□□□□ -0.69
SNCAIP-209ENST00000508017 MRGPRG-AS1Q2M3A8 158 aa10.76□□□□□ -0.69
SNCAIP-209ENST00000508017 C22orf15Q8WYQ4 148 aa10.76□□□□□ -0.69
SNCAIP-209ENST00000508017 DMXL1Q9Y485 3027 aa10.75□□□□□ -0.69
SNCAIP-209ENST00000508017 H0Y8G0 127 aa10.75□□□□□ -0.69
SNCAIP-209ENST00000508017 LTAP01374 205 aa10.75□□□□□ -0.69
SNCAIP-209ENST00000508017 PRB4P10163 310 aaPredicted RBP10.75□□□□□ -0.69
SNCAIP-209ENST00000508017 GP9P14770 177 aa10.75□□□□□ -0.69
SNCAIP-209ENST00000508017 VAMP3Q15836 100 aa10.75□□□□□ -0.69
SNCAIP-209ENST00000508017 OR4C5Q8NGB2 326 aa10.75□□□□□ -0.69
SNCAIP-209ENST00000508017 H1FXQ92522 213 aaKnown RBP10.75□□□□□ -0.69
SNCAIP-209ENST00000508017 ST20Q9HBF5 79 aa10.75□□□□□ -0.69
SNCAIP-209ENST00000508017 WASHC3Q9Y3C0 194 aa10.75□□□□□ -0.69
SNCAIP-209ENST00000508017 FAM215AQ9Y5M1 114 aa10.75□□□□□ -0.69
SNCAIP-209ENST00000508017 ADGRG4Q8IZF6 3080 aa10.75□□□□□ -0.69
SNCAIP-209ENST00000508017 TACC2O95359 2948 aa10.75□□□□□ -0.69
SNCAIP-209ENST00000508017 IGHV3-72A0A0B4J1Y9 119 aa10.75□□□□□ -0.69
SNCAIP-209ENST00000508017 TOX4O94842 621 aa10.75□□□□□ -0.69
SNCAIP-209ENST00000508017 NUDT3O95989 172 aa10.75□□□□□ -0.69
SNCAIP-209ENST00000508017 FAM27E3Q08E93 113 aa10.75□□□□□ -0.69
SNCAIP-209ENST00000508017 CHCHD1Q96BP2 118 aaKnown RBP10.75□□□□□ -0.69
SNCAIP-209ENST00000508017 Q9H3A6 140 aa10.75□□□□□ -0.69
SNCAIP-209ENST00000508017 ZNF835Q9Y2P0 537 aa10.75□□□□□ -0.69
SNCAIP-209ENST00000508017 TAX1BP3O14907 124 aa10.74□□□□□ -0.69
SNCAIP-209ENST00000508017 TCRAP04437 139 aa10.74□□□□□ -0.69
SNCAIP-209ENST00000508017 RBPMS2Q6ZRY4 209 aaKnown RBP10.74□□□□□ -0.69
SNCAIP-209ENST00000508017 CIARTQ8N365 385 aaPredicted RBP10.74□□□□□ -0.69
SNCAIP-209ENST00000508017 OR4A5Q8NH83 315 aa10.74□□□□□ -0.69
SNCAIP-209ENST00000508017 VSTM2AQ8TAG5 236 aa10.74□□□□□ -0.69
SNCAIP-209ENST00000508017 PMCHL2Q9BQD1 86 aa10.74□□□□□ -0.69
SNCAIP-209ENST00000508017 TIMM8BQ9Y5J9 83 aaPredicted RBP10.74□□□□□ -0.69
SNCAIP-209ENST00000508017 LOC102724200A0A096LPH7 203 aaPredicted RBP10.74□□□□□ -0.69
SNCAIP-209ENST00000508017 DEFB109BQ30KR1 87 aa10.74□□□□□ -0.69
SNCAIP-209ENST00000508017 LRRC10Q5BKY1 277 aa10.74□□□□□ -0.69
SNCAIP-209ENST00000508017 BVES-AS1Q5T3Y7 98 aa10.74□□□□□ -0.69
SNCAIP-209ENST00000508017 C5orf17Q8NAS9 161 aa10.74□□□□□ -0.69
SNCAIP-209ENST00000508017 STXBP6Q8NFX7 210 aa10.74□□□□□ -0.69
SNCAIP-209ENST00000508017 SMIM12Q96EX1 92 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms