RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 KRR1Q13601 381 aaKnown RBP1.08□□□□□ -2.24
HMGB1P28-201ENST00000507778 TMED2Q15363 201 aa1.08□□□□□ -2.24
HMGB1P28-201ENST00000507778 DEFB113Q30KQ7 82 aa1.08□□□□□ -2.24
HMGB1P28-201ENST00000507778 FAM19A2Q8N3H0 131 aa1.08□□□□□ -2.24
HMGB1P28-201ENST00000507778 C3orf56Q8N813 242 aa1.08□□□□□ -2.24
HMGB1P28-201ENST00000507778 SLC30A7Q8NEW0 376 aa1.08□□□□□ -2.24
HMGB1P28-201ENST00000507778 OR10X1Q8NGY0 326 aa1.08□□□□□ -2.24
HMGB1P28-201ENST00000507778 SLAMF6Q96DU3 332 aa1.08□□□□□ -2.24
HMGB1P28-201ENST00000507778 C14orf132Q9NPU4 83 aa1.08□□□□□ -2.24
HMGB1P28-201ENST00000507778 FLG2Q5D862 2391 aaPredicted RBP1.08□□□□□ -2.24
HMGB1P28-201ENST00000507778 FCGBPQ9Y6R7 5405 aaPredicted RBP1.08□□□□□ -2.24
HMGB1P28-201ENST00000507778 PCF11O94913 1555 aaKnown RBP1.08□□□□□ -2.24
HMGB1P28-201ENST00000507778 ATP5G3P48201 142 aa1.07□□□□□ -2.24
HMGB1P28-201ENST00000507778 DYNLT1P63172 113 aa1.07□□□□□ -2.24
HMGB1P28-201ENST00000507778 C1orf137Q5JT78 98 aa1.07□□□□□ -2.24
HMGB1P28-201ENST00000507778 GOLT1AQ6ZVE7 132 aa1.07□□□□□ -2.24
HMGB1P28-201ENST00000507778 PHB2Q99623 299 aa1.07□□□□□ -2.24
HMGB1P28-201ENST00000507778 PRADC1Q9BSG0 188 aa1.07□□□□□ -2.24
HMGB1P28-201ENST00000507778 C9orf16Q9BUW7 83 aa1.07□□□□□ -2.24
HMGB1P28-201ENST00000507778 ACER3Q9NUN7 267 aa1.07□□□□□ -2.24
HMGB1P28-201ENST00000507778 ADGRL3Q9HAR2 1447 aa1.06□□□□□ -2.24
HMGB1P28-201ENST00000507778 HMGB3O15347 200 aaKnown RBP1.06□□□□□ -2.24
HMGB1P28-201ENST00000507778 ATP5HO75947 161 aa1.06□□□□□ -2.24
HMGB1P28-201ENST00000507778 GADD45GO95257 159 aa1.06□□□□□ -2.24
HMGB1P28-201ENST00000507778 RRN3P1Q2M238 152 aa1.06□□□□□ -2.24
HMGB1P28-201ENST00000507778 Q8N814 137 aa1.06□□□□□ -2.24
HMGB1P28-201ENST00000507778 C4orf3Q8WVX3 66 aa1.06□□□□□ -2.24
HMGB1P28-201ENST00000507778 OBSCN-AS1Q96MR7 158 aa1.06□□□□□ -2.24
HMGB1P28-201ENST00000507778 IMUPQ9GZP8 106 aa1.06□□□□□ -2.24
HMGB1P28-201ENST00000507778 ARMC1Q9NVT9 282 aa1.06□□□□□ -2.24
HMGB1P28-201ENST00000507778 ZFP30Q9Y2G7 519 aa1.06□□□□□ -2.24
HMGB1P28-201ENST00000507778 TRGV10A0A0A0MS01 117 aa1.05□□□□□ -2.24
HMGB1P28-201ENST00000507778 TIMM17BO60830 172 aa1.05□□□□□ -2.24
HMGB1P28-201ENST00000507778 IFNA7P01567 189 aa1.05□□□□□ -2.24
HMGB1P28-201ENST00000507778 CAPZBP47756 277 aa1.05□□□□□ -2.24
HMGB1P28-201ENST00000507778 BCL2L15Q5TBC7 163 aa1.05□□□□□ -2.24
HMGB1P28-201ENST00000507778 S100A7AQ86SG5 101 aa1.05□□□□□ -2.24
HMGB1P28-201ENST00000507778 CLECL1Q8IZS7 167 aa1.05□□□□□ -2.24
HMGB1P28-201ENST00000507778 STAG3L4Q8TBR4 150 aa1.05□□□□□ -2.24
HMGB1P28-201ENST00000507778 LINC00526Q96FQ7 95 aa1.05□□□□□ -2.24
HMGB1P28-201ENST00000507778 YPEL2Q96QA6 119 aa1.05□□□□□ -2.24
HMGB1P28-201ENST00000507778 RP1P56715 2156 aa1.04□□□□□ -2.24
HMGB1P28-201ENST00000507778 TENM1Q9UKZ4 2725 aa1.04□□□□□ -2.24
HMGB1P28-201ENST00000507778 CCDC160A6NGH7 325 aa1.04□□□□□ -2.24
HMGB1P28-201ENST00000507778 ZNF736B4DX44 427 aaPredicted RBP1.04□□□□□ -2.24
HMGB1P28-201ENST00000507778 M0R2N4 97 aa1.04□□□□□ -2.24
HMGB1P28-201ENST00000507778 HSPE1P61604 102 aaKnown RBP1.04□□□□□ -2.24
HMGB1P28-201ENST00000507778 CNBPP62633 177 aaKnown RBP1.04□□□□□ -2.24
HMGB1P28-201ENST00000507778 TAF1AQ15573 450 aaPredicted RBP1.04□□□□□ -2.24
HMGB1P28-201ENST00000507778 C22orf39Q6P5X5 142 aa1.04□□□□□ -2.24
HMGB1P28-201ENST00000507778 TEX261Q6UWH6 196 aa1.04□□□□□ -2.24
HMGB1P28-201ENST00000507778 LINC00467Q9BRT7 94 aa1.04□□□□□ -2.24
HMGB1P28-201ENST00000507778 TMEM126AQ9H061 195 aa1.04□□□□□ -2.24
HMGB1P28-201ENST00000507778 ARL5AQ9Y689 179 aa1.04□□□□□ -2.24
HMGB1P28-201ENST00000507778 U3KQ87 197 aa1.04□□□□□ -2.24
HMGB1P28-201ENST00000507778 ARFGEF3Q5TH69 2177 aa1.04□□□□□ -2.24
HMGB1P28-201ENST00000507778 DIDO1Q9BTC0 2240 aaKnown RBP1.04□□□□□ -2.24
HMGB1P28-201ENST00000507778 RIMBP3CA6NJZ7 1639 aa1.04□□□□□ -2.24
HMGB1P28-201ENST00000507778 RIMBP3BA6NNM3 1639 aa1.04□□□□□ -2.24
HMGB1P28-201ENST00000507778 RIMBP3Q9UFD9 1639 aa1.04□□□□□ -2.24
HMGB1P28-201ENST00000507778 MED12LQ86YW9 2145 aa1.03□□□□□ -2.24
HMGB1P28-201ENST00000507778 INE1O15225 51 aa1.03□□□□□ -2.24
HMGB1P28-201ENST00000507778 NDUFB3O43676 98 aa1.03□□□□□ -2.24
HMGB1P28-201ENST00000507778 CST8O60676 142 aa1.03□□□□□ -2.24
HMGB1P28-201ENST00000507778 HOXA6P31267 233 aa1.03□□□□□ -2.24
HMGB1P28-201ENST00000507778 GDF5OSQ5U4N7 250 aa1.03□□□□□ -2.24
HMGB1P28-201ENST00000507778 SOSTDC1Q6X4U4 206 aa1.03□□□□□ -2.24
HMGB1P28-201ENST00000507778 PDZD9Q8IXQ8 264 aa1.03□□□□□ -2.24
HMGB1P28-201ENST00000507778 PXT1Q8NFP0 134 aa1.03□□□□□ -2.24
HMGB1P28-201ENST00000507778 TMEM254Q8TBM7 123 aa1.03□□□□□ -2.24
HMGB1P28-201ENST00000507778 CEP19Q96LK0 163 aa1.03□□□□□ -2.24
HMGB1P28-201ENST00000507778 CDC42SE1Q9NRR8 79 aa1.03□□□□□ -2.24
HMGB1P28-201ENST00000507778 TAX1BP3O14907 124 aa1.02□□□□□ -2.25
HMGB1P28-201ENST00000507778 DHFRP00374 187 aa1.02□□□□□ -2.25
HMGB1P28-201ENST00000507778 MPV17LQ2QL34 196 aa1.02□□□□□ -2.25
HMGB1P28-201ENST00000507778 Q8IYB0 196 aa1.02□□□□□ -2.25
HMGB1P28-201ENST00000507778 OR2T35Q8NGX2 323 aa1.02□□□□□ -2.25
HMGB1P28-201ENST00000507778 DOCK5Q9H7D0 1870 aa1.02□□□□□ -2.25
HMGB1P28-201ENST00000507778 KMT2BQ9UMN6 2715 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P28-201ENST00000507778 MICAL3Q7RTP6 2002 aa1.01□□□□□ -2.25
HMGB1P28-201ENST00000507778 ADGRB2O60241 1585 aa1.01□□□□□ -2.25
HMGB1P28-201ENST00000507778 MIA2Q96PC5 1412 aa1.01□□□□□ -2.25
HMGB1P28-201ENST00000507778 A8MWV9 139 aa1.01□□□□□ -2.25
HMGB1P28-201ENST00000507778 GGCTO75223 188 aaKnown RBP1.01□□□□□ -2.25
HMGB1P28-201ENST00000507778 ARF6P62330 175 aa1.01□□□□□ -2.25
HMGB1P28-201ENST00000507778 UBE2BP63146 152 aa1.01□□□□□ -2.25
HMGB1P28-201ENST00000507778 MYL5Q02045 173 aa1.01□□□□□ -2.25
HMGB1P28-201ENST00000507778 GPER1Q99527 375 aa1.01□□□□□ -2.25
HMGB1P28-201ENST00000507778 SLC25A21Q9BQT8 299 aaPredicted RBP1.01□□□□□ -2.25
HMGB1P28-201ENST00000507778 BANF1O75531 89 aa1□□□□□ -2.25
HMGB1P28-201ENST00000507778 C1QBP02746 253 aa1□□□□□ -2.25
HMGB1P28-201ENST00000507778 NCALDP61601 193 aa1□□□□□ -2.25
HMGB1P28-201ENST00000507778 FAM74A1Q5RGS3 127 aa1□□□□□ -2.25
HMGB1P28-201ENST00000507778 HACD4Q5VWC8 232 aa1□□□□□ -2.25
HMGB1P28-201ENST00000507778 DHRS4L2Q6PKH6 230 aa1□□□□□ -2.25
HMGB1P28-201ENST00000507778 ST6GALNAC3Q8NDV1 305 aa1□□□□□ -2.25
HMGB1P28-201ENST00000507778 OR10K1Q8NGX5 313 aa1□□□□□ -2.25
HMGB1P28-201ENST00000507778 CANT1Q8WVQ1 401 aa1□□□□□ -2.25
HMGB1P28-201ENST00000507778 PYCARDQ9ULZ3 195 aa1□□□□□ -2.25
HMGB1P28-201ENST00000507778 ECM29Q5VYK3 1845 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms