RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 DIRAS2Q96HU8 199 aa8.33□□□□□ -1.08
HMGCS1-204ENST00000507293 CCDC59Q9P031 241 aaKnown RBP8.33□□□□□ -1.08
HMGCS1-204ENST00000507293 XCL2Q9UBD3 114 aa8.33□□□□□ -1.08
HMGCS1-204ENST00000507293 ANKRD20A5PA0PJZ0 165 aa8.32□□□□□ -1.08
HMGCS1-204ENST00000507293 H3BMM0 161 aa8.32□□□□□ -1.08
HMGCS1-204ENST00000507293 H3BMQ9 156 aa8.32□□□□□ -1.08
HMGCS1-204ENST00000507293 PSG1P11464 419 aa8.32□□□□□ -1.08
HMGCS1-204ENST00000507293 SMCO1Q147U7 214 aa8.32□□□□□ -1.08
HMGCS1-204ENST00000507293 DYNC2LI1Q8TCX1 351 aa8.32□□□□□ -1.08
HMGCS1-204ENST00000507293 DTD1Q8TEA8 209 aa8.32□□□□□ -1.08
HMGCS1-204ENST00000507293 RNF125Q96EQ8 232 aa8.32□□□□□ -1.08
HMGCS1-204ENST00000507293 C1QTNF4Q9BXJ3 329 aa8.32□□□□□ -1.08
HMGCS1-204ENST00000507293 KRTAP17-1Q9BYP8 105 aa8.32□□□□□ -1.08
HMGCS1-204ENST00000507293 RBKSQ9H477 322 aa8.32□□□□□ -1.08
HMGCS1-204ENST00000507293 SEPSECSQ9HD40 501 aaKnown RBP8.32□□□□□ -1.08
HMGCS1-204ENST00000507293 CACFD1Q9UGQ2 172 aa8.32□□□□□ -1.08
HMGCS1-204ENST00000507293 RSL24D1Q9UHA3 163 aaKnown RBP8.32□□□□□ -1.08
HMGCS1-204ENST00000507293 KCNIP3Q9Y2W7 256 aa8.32□□□□□ -1.08
HMGCS1-204ENST00000507293 ZNF701M0R085 212 aaPredicted RBP8.31□□□□□ -1.08
HMGCS1-204ENST00000507293 HLA-DRB4P13762 266 aa8.31□□□□□ -1.08
HMGCS1-204ENST00000507293 AKR1C4P17516 323 aa8.31□□□□□ -1.08
HMGCS1-204ENST00000507293 CCR6P51684 374 aa8.31□□□□□ -1.08
HMGCS1-204ENST00000507293 NUTF2P61970 127 aaKnown RBP8.31□□□□□ -1.08
HMGCS1-204ENST00000507293 C12orf74Q32Q52 190 aa8.31□□□□□ -1.08
HMGCS1-204ENST00000507293 LGI3Q8N145 548 aa8.31□□□□□ -1.08
HMGCS1-204ENST00000507293 RNF126Q9BV68 326 aa8.31□□□□□ -1.08
HMGCS1-204ENST00000507293 PBDC1Q9BVG4 233 aa8.31□□□□□ -1.08
HMGCS1-204ENST00000507293 NDUFA13Q9P0J0 144 aa8.31□□□□□ -1.08
HMGCS1-204ENST00000507293 RABL2AQ9UBK7 228 aaPredicted RBP8.31□□□□□ -1.08
HMGCS1-204ENST00000507293 HSPB7Q9UBY9 170 aa8.31□□□□□ -1.08
HMGCS1-204ENST00000507293 SCP2D1Q9UJQ7 156 aa8.31□□□□□ -1.08
HMGCS1-204ENST00000507293 RABL2BQ9UNT1 228 aa8.31□□□□□ -1.08
HMGCS1-204ENST00000507293 U3KQ87 197 aa8.31□□□□□ -1.08
HMGCS1-204ENST00000507293 HLA-DRB4X5D2U9 266 aa8.31□□□□□ -1.08
HMGCS1-204ENST00000507293 DEFB131BA0A096LNP1 70 aa8.3□□□□□ -1.08
HMGCS1-204ENST00000507293 A0A0B4J2A0 478 aa8.3□□□□□ -1.08
HMGCS1-204ENST00000507293 ZFP92A6NM28 416 aa8.3□□□□□ -1.08
HMGCS1-204ENST00000507293 AMBPP02760 352 aa8.3□□□□□ -1.08
HMGCS1-204ENST00000507293 NUP62P37198 522 aaPredicted RBP8.3□□□□□ -1.08
HMGCS1-204ENST00000507293 DEFB1P60022 68 aa8.3□□□□□ -1.08
HMGCS1-204ENST00000507293 SUPT4H1P63272 117 aaKnown RBP8.3□□□□□ -1.08
HMGCS1-204ENST00000507293 KLF9Q13886 244 aaPredicted RBP8.3□□□□□ -1.08
HMGCS1-204ENST00000507293 GDF5OSQ5U4N7 250 aa8.3□□□□□ -1.08
HMGCS1-204ENST00000507293 LYZL2Q7Z4W2 148 aa8.3□□□□□ -1.08
HMGCS1-204ENST00000507293 SCGB3A2Q96PL1 93 aa8.3□□□□□ -1.08
HMGCS1-204ENST00000507293 MCUBQ9NWR8 336 aa8.3□□□□□ -1.08
HMGCS1-204ENST00000507293 SHPKQ9UHJ6 478 aa8.3□□□□□ -1.08
HMGCS1-204ENST00000507293 IGKV1D-37A0A075B6S9 117 aa8.29□□□□□ -1.08
HMGCS1-204ENST00000507293 IGKV3-20P01619 116 aa8.29□□□□□ -1.08
HMGCS1-204ENST00000507293 ANXA3P12429 323 aa8.29□□□□□ -1.08
HMGCS1-204ENST00000507293 NKX2-1P43699 371 aaPredicted RBP8.29□□□□□ -1.08
HMGCS1-204ENST00000507293 FXYD7P58549 80 aa8.29□□□□□ -1.08
HMGCS1-204ENST00000507293 LYZP61626 148 aa8.29□□□□□ -1.08
HMGCS1-204ENST00000507293 SRPXP78539 464 aa8.29□□□□□ -1.08
HMGCS1-204ENST00000507293 ZNF90Q03938 601 aa8.29□□□□□ -1.08
HMGCS1-204ENST00000507293 GAMTQ14353 236 aa8.29□□□□□ -1.08
HMGCS1-204ENST00000507293 OR8G2PQ6IF36 304 aa8.29□□□□□ -1.08
HMGCS1-204ENST00000507293 OR1S1Q8NH92 325 aa8.29□□□□□ -1.08
HMGCS1-204ENST00000507293 SLC35E1Q96K37 410 aa8.29□□□□□ -1.08
HMGCS1-204ENST00000507293 LINC00052Q96N35 136 aa8.29□□□□□ -1.08
HMGCS1-204ENST00000507293 SCRT1Q9BWW7 348 aa8.29□□□□□ -1.08
HMGCS1-204ENST00000507293 WDR12Q9GZL7 423 aaKnown RBP8.29□□□□□ -1.08
HMGCS1-204ENST00000507293 RBM38Q9H0Z9 239 aaKnown RBP8.29□□□□□ -1.08
HMGCS1-204ENST00000507293 HERC2O95714 4834 aa8.28□□□□□ -1.08
HMGCS1-204ENST00000507293 DNAH6Q9C0G6 4158 aa8.28□□□□□ -1.08
HMGCS1-204ENST00000507293 GPX4P36969 197 aaPredicted RBP8.28□□□□□ -1.08
HMGCS1-204ENST00000507293 OR2F1Q13607 317 aa8.28□□□□□ -1.08
HMGCS1-204ENST00000507293 GSG1LQ6UXU4 331 aa8.28□□□□□ -1.08
HMGCS1-204ENST00000507293 ZNF705AQ6ZN79 300 aaPredicted RBP8.28□□□□□ -1.08
HMGCS1-204ENST00000507293 MCFD2Q8NI22 146 aa8.28□□□□□ -1.08
HMGCS1-204ENST00000507293 COQ8AQ8NI60 647 aa8.28□□□□□ -1.08
HMGCS1-204ENST00000507293 SAV1Q9H4B6 383 aaPredicted RBP8.28□□□□□ -1.08
HMGCS1-204ENST00000507293 PFDN2Q9UHV9 154 aa8.28□□□□□ -1.08
HMGCS1-204ENST00000507293 IGHV3OR16-12A0A075B7B8 117 aa8.27□□□□□ -1.09
HMGCS1-204ENST00000507293 ZNF705FA8MVS1 300 aaPredicted RBP8.27□□□□□ -1.09
HMGCS1-204ENST00000507293 SOCS3O14543 225 aa8.27□□□□□ -1.09
HMGCS1-204ENST00000507293 FABP1P07148 127 aa8.27□□□□□ -1.09
HMGCS1-204ENST00000507293 ZNF705DP0CH99 300 aaPredicted RBP8.27□□□□□ -1.09
HMGCS1-204ENST00000507293 ZNF705BP0CI00 300 aaPredicted RBP8.27□□□□□ -1.09
HMGCS1-204ENST00000507293 IAPPP10997 89 aa8.27□□□□□ -1.09
HMGCS1-204ENST00000507293 ID1P41134 155 aa8.27□□□□□ -1.09
HMGCS1-204ENST00000507293 PSMB3P49720 205 aa8.27□□□□□ -1.09
HMGCS1-204ENST00000507293 EMP1P54849 157 aa8.27□□□□□ -1.09
HMGCS1-204ENST00000507293 ATP5IP56385 69 aaPredicted RBP8.27□□□□□ -1.09
HMGCS1-204ENST00000507293 FOXI2Q6ZQN5 318 aa8.27□□□□□ -1.09
HMGCS1-204ENST00000507293 TMED4Q7Z7H5 227 aa8.27□□□□□ -1.09
HMGCS1-204ENST00000507293 PPP1R14BQ96C90 147 aa8.27□□□□□ -1.09
HMGCS1-204ENST00000507293 NEU1Q99519 415 aa8.27□□□□□ -1.09
HMGCS1-204ENST00000507293 NDUFAF3Q9BU61 184 aa8.27□□□□□ -1.09
HMGCS1-204ENST00000507293 SLIRPQ9GZT3 109 aaKnown RBP8.27□□□□□ -1.09
HMGCS1-204ENST00000507293 DUXBA0A1W2PPF3 345 aa8.26□□□□□ -1.09
HMGCS1-204ENST00000507293 FABP12A6NFH5 140 aa8.26□□□□□ -1.09
HMGCS1-204ENST00000507293 SMIM9A6NGZ8 99 aa8.26□□□□□ -1.09
HMGCS1-204ENST00000507293 PITX3O75364 302 aa8.26□□□□□ -1.09
HMGCS1-204ENST00000507293 TNFSF8P32971 234 aa8.26□□□□□ -1.09
HMGCS1-204ENST00000507293 S100A5P33763 92 aa8.26□□□□□ -1.09
HMGCS1-204ENST00000507293 C1orf194Q5T5A4 169 aa8.26□□□□□ -1.09
HMGCS1-204ENST00000507293 LINC00336Q6ZUF6 198 aa8.26□□□□□ -1.09
HMGCS1-204ENST00000507293 POM121L12Q8N7R1 296 aa8.26□□□□□ -1.09
HMGCS1-204ENST00000507293 ZNF709Q8N972 641 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms