RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 A0A1W2PS18 150 aa9.79□□□□□ -0.84
TCOF1-209ENST00000506630 PRSS46E5RG02 174 aa9.79□□□□□ -0.84
TCOF1-209ENST00000506630 INMT-MINDY4F8WBC2 141 aa9.79□□□□□ -0.84
TCOF1-209ENST00000506630 MBPP02686 304 aaPredicted RBP9.79□□□□□ -0.84
TCOF1-209ENST00000506630 HNRNPCP07910 306 aaKnown RBP eCLIP9.79□□□□□ -0.84
TCOF1-209ENST00000506630 RD3LP0DJH9 198 aa9.79□□□□□ -0.84
TCOF1-209ENST00000506630 CRYBB3P26998 211 aa9.79□□□□□ -0.84
TCOF1-209ENST00000506630 AKR1C1Q04828 323 aa9.79□□□□□ -0.84
TCOF1-209ENST00000506630 OR8G2PQ6IF36 304 aa9.79□□□□□ -0.84
TCOF1-209ENST00000506630 GSG1LQ6UXU4 331 aa9.79□□□□□ -0.84
TCOF1-209ENST00000506630 ACOT7LQ6ZUV0 252 aa9.79□□□□□ -0.84
TCOF1-209ENST00000506630 GBGT1Q8N5D6 347 aa9.79□□□□□ -0.84
TCOF1-209ENST00000506630 SMIM8Q96KF7 97 aa9.79□□□□□ -0.84
TCOF1-209ENST00000506630 C2orf50Q96LR7 162 aa9.79□□□□□ -0.84
TCOF1-209ENST00000506630 RAB40CQ96S21 281 aa9.79□□□□□ -0.84
TCOF1-209ENST00000506630 SACSQ9NZJ4 4579 aa9.78□□□□□ -0.84
TCOF1-209ENST00000506630 IGKV1D-37A0A075B6S9 117 aa9.78□□□□□ -0.84
TCOF1-209ENST00000506630 SMCO3A2RU48 225 aa9.78□□□□□ -0.84
TCOF1-209ENST00000506630 L7N2F9 121 aa9.78□□□□□ -0.84
TCOF1-209ENST00000506630 PRAF2O60831 178 aa9.78□□□□□ -0.84
TCOF1-209ENST00000506630 DFFBO76075 338 aa9.78□□□□□ -0.84
TCOF1-209ENST00000506630 CD5P06127 495 aa9.78□□□□□ -0.84
TCOF1-209ENST00000506630 PSG1P11464 419 aa9.78□□□□□ -0.84
TCOF1-209ENST00000506630 PAX9P55771 341 aa9.78□□□□□ -0.84
TCOF1-209ENST00000506630 RPL11P62913 178 aaKnown RBP9.78□□□□□ -0.84
TCOF1-209ENST00000506630 VAMP2P63027 116 aa9.78□□□□□ -0.84
TCOF1-209ENST00000506630 PAFAH1B2P68402 229 aa9.78□□□□□ -0.84
TCOF1-209ENST00000506630 ZNF90Q03938 601 aa9.78□□□□□ -0.84
TCOF1-209ENST00000506630 USF2Q15853 346 aaPredicted RBP9.78□□□□□ -0.84
TCOF1-209ENST00000506630 FAM90A2PQ658T7 463 aa9.78□□□□□ -0.84
TCOF1-209ENST00000506630 LILRB2Q8N423 598 aa9.78□□□□□ -0.84
TCOF1-209ENST00000506630 OR51G1Q8NGK1 321 aa9.78□□□□□ -0.84
TCOF1-209ENST00000506630 PBDC1Q9BVG4 233 aa9.78□□□□□ -0.84
TCOF1-209ENST00000506630 EPPK1P58107 5090 aaKnown RBP9.78□□□□□ -0.84
TCOF1-209ENST00000506630 DYNC2H1Q8NCM8 4307 aaKnown RBP9.77□□□□□ -0.85
TCOF1-209ENST00000506630 K7EPK0 472 aa9.77□□□□□ -0.85
TCOF1-209ENST00000506630 DNASE2O00115 360 aaPredicted RBP9.77□□□□□ -0.85
TCOF1-209ENST00000506630 TSC22D2O75157 780 aa9.77□□□□□ -0.85
TCOF1-209ENST00000506630 CCNKO75909 580 aa9.77□□□□□ -0.85
TCOF1-209ENST00000506630 FABP1P07148 127 aa9.77□□□□□ -0.85
TCOF1-209ENST00000506630 METTL15P1P0C7V9 234 aa9.77□□□□□ -0.85
TCOF1-209ENST00000506630 P2RY1P47900 373 aa9.77□□□□□ -0.85
TCOF1-209ENST00000506630 S100A10P60903 97 aa9.77□□□□□ -0.85
TCOF1-209ENST00000506630 LYZP61626 148 aa9.77□□□□□ -0.85
TCOF1-209ENST00000506630 OR2F1Q13607 317 aa9.77□□□□□ -0.85
TCOF1-209ENST00000506630 ODF3L2Q3SX64 289 aa9.77□□□□□ -0.85
TCOF1-209ENST00000506630 C4orf48Q5BLP8 95 aa9.77□□□□□ -0.85
TCOF1-209ENST00000506630 TMEM14EPQ6UXP3 125 aa9.77□□□□□ -0.85
TCOF1-209ENST00000506630 WFDC3Q8IUB2 231 aa9.77□□□□□ -0.85
TCOF1-209ENST00000506630 THAP8Q8NA92 274 aa9.77□□□□□ -0.85
TCOF1-209ENST00000506630 RNF125Q96EQ8 232 aa9.77□□□□□ -0.85
TCOF1-209ENST00000506630 GRAMD2BQ96HH9 432 aa9.77□□□□□ -0.85
TCOF1-209ENST00000506630 TRGV9Q99603 122 aa9.77□□□□□ -0.85
TCOF1-209ENST00000506630 RABAC1Q9UI14 185 aa9.77□□□□□ -0.85
TCOF1-209ENST00000506630 AGRNO00468 2067 aa9.77□□□□□ -0.85
TCOF1-209ENST00000506630 BIRC6Q9NR09 4857 aa9.77□□□□□ -0.85
TCOF1-209ENST00000506630 RYR2Q92736 4967 aa9.76□□□□□ -0.85
TCOF1-209ENST00000506630 STARD9Q9P2P6 4700 aa9.76□□□□□ -0.85
TCOF1-209ENST00000506630 IGKV1OR2-108A0A075B7D4 117 aa9.76□□□□□ -0.85
TCOF1-209ENST00000506630 C7orf66A4D0T2 115 aa9.76□□□□□ -0.85
TCOF1-209ENST00000506630 RBMY1BA6NDE4 496 aaKnown RBP9.76□□□□□ -0.85
TCOF1-209ENST00000506630 RBMY1EA6NEQ0 496 aaKnown RBP9.76□□□□□ -0.85
TCOF1-209ENST00000506630 PMS2P5A8MQ11 134 aa9.76□□□□□ -0.85
TCOF1-209ENST00000506630 SNRPGP15A8MWD9 76 aa9.76□□□□□ -0.85
TCOF1-209ENST00000506630 GOSR2O14653 212 aa9.76□□□□□ -0.85
TCOF1-209ENST00000506630 JTBO76095 146 aa9.76□□□□□ -0.85
TCOF1-209ENST00000506630 RBMY1DP0C7P1 496 aaKnown RBP9.76□□□□□ -0.85
TCOF1-209ENST00000506630 BCAP31P51572 246 aa9.76□□□□□ -0.85
TCOF1-209ENST00000506630 TAS2R30P59541 319 aa9.76□□□□□ -0.85
TCOF1-209ENST00000506630 RRAS2P62070 204 aaPredicted RBP9.76□□□□□ -0.85
TCOF1-209ENST00000506630 HAGHQ16775 308 aa9.76□□□□□ -0.85
TCOF1-209ENST00000506630 STXBP6Q8NFX7 210 aa9.76□□□□□ -0.85
TCOF1-209ENST00000506630 TM2D3Q9BRN9 247 aa9.76□□□□□ -0.85
TCOF1-209ENST00000506630 MARVELD1Q9BSK0 173 aa9.76□□□□□ -0.85
TCOF1-209ENST00000506630 MS4A6AQ9H2W1 248 aa9.76□□□□□ -0.85
TCOF1-209ENST00000506630 SIX6O95475 246 aa9.75□□□□□ -0.85
TCOF1-209ENST00000506630 PVALBP20472 110 aaPredicted RBP9.75□□□□□ -0.85
TCOF1-209ENST00000506630 DLK1P80370 383 aa9.75□□□□□ -0.85
TCOF1-209ENST00000506630 OR10P1Q8NGE3 313 aa9.75□□□□□ -0.85
TCOF1-209ENST00000506630 SPATA25Q9BR10 227 aa9.75□□□□□ -0.85
TCOF1-209ENST00000506630 EDA2RQ9HAV5 297 aa9.75□□□□□ -0.85
TCOF1-209ENST00000506630 MGAT4CQ9UBM8 478 aa9.75□□□□□ -0.85
TCOF1-209ENST00000506630 CSMD3Q7Z407 3707 aa9.74□□□□□ -0.85
TCOF1-209ENST00000506630 LOC102724200A0A096LPH7 203 aaPredicted RBP9.74□□□□□ -0.85
TCOF1-209ENST00000506630 NUP62P37198 522 aaPredicted RBP9.74□□□□□ -0.85
TCOF1-209ENST00000506630 EIF2B2P49770 351 aaKnown RBP9.74□□□□□ -0.85
TCOF1-209ENST00000506630 CAV2P51636 162 aa9.74□□□□□ -0.85
TCOF1-209ENST00000506630 RAB32Q13637 225 aa9.74□□□□□ -0.85
TCOF1-209ENST00000506630 C16orf54Q6UWD8 224 aa9.74□□□□□ -0.85
TCOF1-209ENST00000506630 LINC00322Q6ZN03 302 aaPredicted RBP9.74□□□□□ -0.85
TCOF1-209ENST00000506630 TMEM144Q7Z5S9 345 aa9.74□□□□□ -0.85
TCOF1-209ENST00000506630 GLMPQ8WWB7 406 aa9.74□□□□□ -0.85
TCOF1-209ENST00000506630 PPP1R14BQ96C90 147 aa9.74□□□□□ -0.85
TCOF1-209ENST00000506630 GGTLC1Q9BX51 225 aa9.74□□□□□ -0.85
TCOF1-209ENST00000506630 MAP6D1Q9H9H5 199 aa9.74□□□□□ -0.85
TCOF1-209ENST00000506630 U3KQE9 123 aa9.74□□□□□ -0.85
TCOF1-209ENST00000506630 HELTA6NFD8 242 aa9.73□□□□□ -0.85
TCOF1-209ENST00000506630 BUB3O43684 328 aa9.73□□□□□ -0.85
TCOF1-209ENST00000506630 SSNA1O43805 119 aa9.73□□□□□ -0.85
TCOF1-209ENST00000506630 GATA2P23769 480 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms