RNA–Protein interactions for RNA: ENST00000506443.5

COPS4-204, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 4

Gene COPS4, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-204ENST00000506443 TMEM230Q96A57 120 aa6.28□□□□□ -1.4
COPS4-204ENST00000506443 YTHDF1Q9BYJ9 559 aaKnown RBP6.28□□□□□ -1.4
COPS4-204ENST00000506443 MDFICQ9P1T7 246 aa6.28□□□□□ -1.4
COPS4-204ENST00000506443 SSR3Q9UNL2 185 aa6.28□□□□□ -1.4
COPS4-204ENST00000506443 RFNGQ9Y644 331 aa6.28□□□□□ -1.4
COPS4-204ENST00000506443 HLA-DRB4X5D2U9 266 aa6.28□□□□□ -1.4
COPS4-204ENST00000506443 NBDYA0A0U1RRE5 68 aa6.27□□□□□ -1.41
COPS4-204ENST00000506443 IGLC1P0CG04 106 aa6.27□□□□□ -1.41
COPS4-204ENST00000506443 M6PRP20645 277 aa6.27□□□□□ -1.41
COPS4-204ENST00000506443 DLK1P80370 383 aa6.27□□□□□ -1.41
COPS4-204ENST00000506443 DHODHQ02127 395 aa6.27□□□□□ -1.41
COPS4-204ENST00000506443 USF2Q15853 346 aaPredicted RBP6.27□□□□□ -1.41
COPS4-204ENST00000506443 SLC51BQ86UW2 128 aa6.27□□□□□ -1.41
COPS4-204ENST00000506443 STX12Q86Y82 276 aa6.27□□□□□ -1.41
COPS4-204ENST00000506443 C1orf158Q8N1D5 194 aa6.27□□□□□ -1.41
COPS4-204ENST00000506443 C6orf223Q8N319 242 aa6.27□□□□□ -1.41
COPS4-204ENST00000506443 OR5H2Q8NGV7 314 aa6.27□□□□□ -1.41
COPS4-204ENST00000506443 C18orf15Q96N68 181 aa6.27□□□□□ -1.41
COPS4-204ENST00000506443 CLUHP3Q96NS8 147 aa6.27□□□□□ -1.41
COPS4-204ENST00000506443 NRN1Q9NPD7 142 aa6.27□□□□□ -1.41
COPS4-204ENST00000506443 IFT46Q9NQC8 304 aa6.27□□□□□ -1.41
COPS4-204ENST00000506443 IGHV3OR16-12A0A075B7B8 117 aa6.26□□□□□ -1.41
COPS4-204ENST00000506443 TRAV30A0A087WSZ9 112 aa6.26□□□□□ -1.41
COPS4-204ENST00000506443 CORTO00230 105 aa6.26□□□□□ -1.41
COPS4-204ENST00000506443 NOL3O60936 208 aaKnown RBP6.26□□□□□ -1.41
COPS4-204ENST00000506443 PRM2P04554 102 aa6.26□□□□□ -1.41
COPS4-204ENST00000506443 HLA-DMAP28067 261 aa6.26□□□□□ -1.41
COPS4-204ENST00000506443 HRH1P35367 487 aa6.26□□□□□ -1.41
COPS4-204ENST00000506443 NKX2-1P43699 371 aaPredicted RBP6.26□□□□□ -1.41
COPS4-204ENST00000506443 EIF2B2P49770 351 aaKnown RBP6.26□□□□□ -1.41
COPS4-204ENST00000506443 SUB1P53999 127 aaKnown RBP eCLIP6.26□□□□□ -1.41
COPS4-204ENST00000506443 UCP3P55916 312 aa6.26□□□□□ -1.41
COPS4-204ENST00000506443 TAS2R46P59540 309 aa6.26□□□□□ -1.41
COPS4-204ENST00000506443 YPEL3P61236 119 aaPredicted RBP6.26□□□□□ -1.41
COPS4-204ENST00000506443 SNRPD3P62318 126 aaKnown RBP6.26□□□□□ -1.41
COPS4-204ENST00000506443 LPCAT3Q6P1A2 487 aa6.26□□□□□ -1.41
COPS4-204ENST00000506443 PRSS54Q6PEW0 395 aa6.26□□□□□ -1.41
COPS4-204ENST00000506443 Q8WTZ3 238 aa6.26□□□□□ -1.41
COPS4-204ENST00000506443 S100A16Q96FQ6 103 aaKnown RBP6.26□□□□□ -1.41
COPS4-204ENST00000506443 NARS2Q96I59 477 aaKnown RBP6.26□□□□□ -1.41
COPS4-204ENST00000506443 TEX48A0A1B0GUV7 120 aa6.25□□□□□ -1.41
COPS4-204ENST00000506443 TMEM127O75204 238 aa6.25□□□□□ -1.41
COPS4-204ENST00000506443 NXPH3O95157 252 aa6.25□□□□□ -1.41
COPS4-204ENST00000506443 IGKV3-20P01619 116 aa6.25□□□□□ -1.41
COPS4-204ENST00000506443 PSMB9P28065 219 aa6.25□□□□□ -1.41
COPS4-204ENST00000506443 OPRK1P41145 380 aa6.25□□□□□ -1.41
COPS4-204ENST00000506443 HOXA1P49639 335 aaPredicted RBP6.25□□□□□ -1.41
COPS4-204ENST00000506443 XGP55808 180 aa6.25□□□□□ -1.41
COPS4-204ENST00000506443 TAS2R20P59543 309 aa6.25□□□□□ -1.41
COPS4-204ENST00000506443 GABARAPL2P60520 117 aa6.25□□□□□ -1.41
COPS4-204ENST00000506443 AARDQ4LEZ3 155 aa6.25□□□□□ -1.41
COPS4-204ENST00000506443 GPX8Q8TED1 209 aa6.25□□□□□ -1.41
COPS4-204ENST00000506443 TMEM170AQ8WVE7 144 aa6.25□□□□□ -1.41
COPS4-204ENST00000506443 CNBD2Q96M20 576 aa6.25□□□□□ -1.41
COPS4-204ENST00000506443 WDR12Q9GZL7 423 aaKnown RBP6.25□□□□□ -1.41
COPS4-204ENST00000506443 SLC35B3Q9H1N7 401 aa6.25□□□□□ -1.41
COPS4-204ENST00000506443 SAV1Q9H4B6 383 aaPredicted RBP6.25□□□□□ -1.41
COPS4-204ENST00000506443 YTHDF2Q9Y5A9 579 aaKnown RBP6.25□□□□□ -1.41
COPS4-204ENST00000506443 A0A0G2JRQ6 117 aa6.24□□□□□ -1.41
COPS4-204ENST00000506443 LOC102723971A0A1B0GUV8 181 aa6.24□□□□□ -1.41
COPS4-204ENST00000506443 LOC105371267A0A1B0GV96 52 aa6.24□□□□□ -1.41
COPS4-204ENST00000506443 ANKRD65E5RJM6 399 aa6.24□□□□□ -1.41
COPS4-204ENST00000506443 SOCS3O14543 225 aa6.24□□□□□ -1.41
COPS4-204ENST00000506443 SMR3BP02814 79 aaPredicted RBP6.24□□□□□ -1.41
COPS4-204ENST00000506443 PRSS3P35030 304 aa6.24□□□□□ -1.41
COPS4-204ENST00000506443 POLR2GP62487 172 aaKnown RBP eCLIP6.24□□□□□ -1.41
COPS4-204ENST00000506443 COTL1Q14019 142 aa6.24□□□□□ -1.41
COPS4-204ENST00000506443 ZNF79Q15937 498 aa6.24□□□□□ -1.41
COPS4-204ENST00000506443 RGS21Q2M5E4 152 aa6.24□□□□□ -1.41
COPS4-204ENST00000506443 SIGLEC15Q6ZMC9 328 aa6.24□□□□□ -1.41
COPS4-204ENST00000506443 SLC35G3Q8N808 338 aa6.24□□□□□ -1.41
COPS4-204ENST00000506443 C15orf53Q8NAA6 179 aa6.24□□□□□ -1.41
COPS4-204ENST00000506443 OR1S2Q8NGQ3 325 aa6.24□□□□□ -1.41
COPS4-204ENST00000506443 TP53RKQ96S44 253 aa6.24□□□□□ -1.41
COPS4-204ENST00000506443 TMED3Q9Y3Q3 217 aa6.24□□□□□ -1.41
COPS4-204ENST00000506443 LOC100506127A0A0U1RQW1 187 aa6.23□□□□□ -1.41
COPS4-204ENST00000506443 IL4P05112 153 aa6.23□□□□□ -1.41
COPS4-204ENST00000506443 S100GP29377 79 aa6.23□□□□□ -1.41
COPS4-204ENST00000506443 OR10J1P30954 320 aa6.23□□□□□ -1.41
COPS4-204ENST00000506443 ALDH3B2P48448 385 aa6.23□□□□□ -1.41
COPS4-204ENST00000506443 RND2P52198 227 aa6.23□□□□□ -1.41
COPS4-204ENST00000506443 RND3P61587 244 aa6.23□□□□□ -1.41
COPS4-204ENST00000506443 TSPAN5P62079 268 aa6.23□□□□□ -1.41
COPS4-204ENST00000506443 MAJINQ3KP22 176 aa6.23□□□□□ -1.41
COPS4-204ENST00000506443 UBE2NLQ5JXB2 153 aa6.23□□□□□ -1.41
COPS4-204ENST00000506443 TMEM69Q5SWH9 247 aa6.23□□□□□ -1.41
COPS4-204ENST00000506443 FOXI2Q6ZQN5 318 aa6.23□□□□□ -1.41
COPS4-204ENST00000506443 AKAP14Q86UN6 197 aa6.23□□□□□ -1.41
COPS4-204ENST00000506443 FCGR1BQ92637 280 aa6.23□□□□□ -1.41
COPS4-204ENST00000506443 VCX3AQ9NNX9 186 aa6.23□□□□□ -1.41
COPS4-204ENST00000506443 KLK11Q9UBX7 282 aa6.23□□□□□ -1.41
COPS4-204ENST00000506443 LINC00588Q9Y4M8 146 aa6.23□□□□□ -1.41
COPS4-204ENST00000506443 LRP1Q07954 4544 aaKnown RBP6.22□□□□□ -1.41
COPS4-204ENST00000506443 A8MTW9 85 aa6.22□□□□□ -1.41
COPS4-204ENST00000506443 F6UB75 175 aa6.22□□□□□ -1.41
COPS4-204ENST00000506443 CIDEAO60543 219 aa6.22□□□□□ -1.41
COPS4-204ENST00000506443 TOMM40O96008 361 aa6.22□□□□□ -1.41
COPS4-204ENST00000506443 HBE1P02100 147 aa6.22□□□□□ -1.41
COPS4-204ENST00000506443 RD3LP0DJH9 198 aa6.22□□□□□ -1.41
COPS4-204ENST00000506443 PSG1P11464 419 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms