RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	PAIP2B	Q9ULR5	123 aa	Known RBP	11.91	□□□□□ -0.5
DDR1-256	ENST00000505066		A0A0B4J2A0	478 aa		11.9	□□□□□ -0.5
DDR1-256	ENST00000505066	TEX48	A0A1B0GUV7	120 aa		11.9	□□□□□ -0.5
DDR1-256	ENST00000505066	RNF125	Q96EQ8	232 aa		11.9	□□□□□ -0.5
DDR1-256	ENST00000505066	LINC00052	Q96N35	136 aa		11.9	□□□□□ -0.5
DDR1-256	ENST00000505066	RNF126	Q9BV68	326 aa		11.9	□□□□□ -0.5
DDR1-256	ENST00000505066	XCL2	Q9UBD3	114 aa		11.9	□□□□□ -0.5
DDR1-256	ENST00000505066	SHPK	Q9UHJ6	478 aa		11.9	□□□□□ -0.5
DDR1-256	ENST00000505066		U3KQE9	123 aa		11.9	□□□□□ -0.5
DDR1-256	ENST00000505066	EPPK1	P58107	5090 aa	Known RBP	11.9	□□□□□ -0.5
DDR1-256	ENST00000505066	SNRPGP15	A8MWD9	76 aa		11.89	□□□□□ -0.51
DDR1-256	ENST00000505066	MED6	O75586	246 aa		11.89	□□□□□ -0.51
DDR1-256	ENST00000505066	PSG1	P11464	419 aa		11.89	□□□□□ -0.51
DDR1-256	ENST00000505066	GPX4	P36969	197 aa	Predicted RBP	11.89	□□□□□ -0.51
DDR1-256	ENST00000505066	NKX2-1	P43699	371 aa	Predicted RBP	11.89	□□□□□ -0.51
DDR1-256	ENST00000505066	NMS	Q5H8A3	153 aa		11.89	□□□□□ -0.51
DDR1-256	ENST00000505066	SPATA31B1P	Q5VZV4	182 aa		11.89	□□□□□ -0.51
DDR1-256	ENST00000505066	EBLN2	Q6P2I7	272 aa		11.89	□□□□□ -0.51
DDR1-256	ENST00000505066	LHFPL5	Q8TAF8	219 aa		11.89	□□□□□ -0.51
DDR1-256	ENST00000505066	BCL7B	Q9BQE9	202 aa		11.89	□□□□□ -0.51
DDR1-256	ENST00000505066	NDUFAF3	Q9BU61	184 aa		11.89	□□□□□ -0.51
DDR1-256	ENST00000505066	MIXL1	Q9H2W2	232 aa		11.89	□□□□□ -0.51
DDR1-256	ENST00000505066	CCDC59	Q9P031	241 aa	Known RBP	11.89	□□□□□ -0.51
DDR1-256	ENST00000505066	IGHV4-4	A0A075B6R2	117 aa		11.88	□□□□□ -0.51
DDR1-256	ENST00000505066	DEFB131B	A0A096LNP1	70 aa		11.88	□□□□□ -0.51
DDR1-256	ENST00000505066	FABP12	A6NFH5	140 aa		11.88	□□□□□ -0.51
DDR1-256	ENST00000505066	BUB3	O43684	328 aa		11.88	□□□□□ -0.51
DDR1-256	ENST00000505066	CFD	P00746	253 aa	Predicted RBP	11.88	□□□□□ -0.51
DDR1-256	ENST00000505066	SPART-AS1	P0CW21	52 aa		11.88	□□□□□ -0.51
DDR1-256	ENST00000505066	RBMY1A1	P0DJD3	496 aa	Known RBP	11.88	□□□□□ -0.51
DDR1-256	ENST00000505066	RBMY1C	P0DJD4	496 aa		11.88	□□□□□ -0.51
DDR1-256	ENST00000505066		P0DMU3	169 aa		11.88	□□□□□ -0.51
DDR1-256	ENST00000505066	FAM231A	P0DMU4	169 aa		11.88	□□□□□ -0.51
DDR1-256	ENST00000505066	FAM231C	P0DMU5	169 aa		11.88	□□□□□ -0.51
DDR1-256	ENST00000505066	C4BPB	P20851	252 aa		11.88	□□□□□ -0.51
DDR1-256	ENST00000505066	RBMY1F	Q15415	496 aa	Known RBP	11.88	□□□□□ -0.51
DDR1-256	ENST00000505066	USF2	Q15853	346 aa	Predicted RBP	11.88	□□□□□ -0.51
DDR1-256	ENST00000505066	C1orf194	Q5T5A4	169 aa		11.88	□□□□□ -0.51
DDR1-256	ENST00000505066		Q6ZTC4	211 aa		11.88	□□□□□ -0.51
DDR1-256	ENST00000505066	CIB3	Q96Q77	187 aa	Predicted RBP	11.88	□□□□□ -0.51
DDR1-256	ENST00000505066	RBKS	Q9H477	322 aa		11.88	□□□□□ -0.51
DDR1-256	ENST00000505066	HSPB7	Q9UBY9	170 aa		11.88	□□□□□ -0.51
DDR1-256	ENST00000505066	ALMS1	Q8TCU4	4167 aa		11.88	□□□□□ -0.51
DDR1-256	ENST00000505066	ANKRD20A5P	A0PJZ0	165 aa		11.87	□□□□□ -0.51
DDR1-256	ENST00000505066	SMIM9	A6NGZ8	99 aa		11.87	□□□□□ -0.51
DDR1-256	ENST00000505066	TMBIM6	P55061	237 aa		11.87	□□□□□ -0.51
DDR1-256	ENST00000505066	LYZ	P61626	148 aa		11.87	□□□□□ -0.51
DDR1-256	ENST00000505066	SPCS2	Q15005	226 aa		11.87	□□□□□ -0.51
DDR1-256	ENST00000505066	GGNBP1	Q5YKI7	109 aa		11.87	□□□□□ -0.51
DDR1-256	ENST00000505066	OR8I2	Q8N0Y5	310 aa		11.87	□□□□□ -0.51
DDR1-256	ENST00000505066	C7orf50	Q9BRJ6	194 aa	Known RBP	11.87	□□□□□ -0.51
DDR1-256	ENST00000505066	APLN	Q9ULZ1	77 aa		11.87	□□□□□ -0.51
DDR1-256	ENST00000505066	GOLT1B	Q9Y3E0	138 aa		11.87	□□□□□ -0.51
DDR1-256	ENST00000505066	IGHV3OR16-12	A0A075B7B8	117 aa		11.86	□□□□□ -0.51
DDR1-256	ENST00000505066	DUXB	A0A1W2PPF3	345 aa		11.86	□□□□□ -0.51
DDR1-256	ENST00000505066		H3BMM0	161 aa		11.86	□□□□□ -0.51
DDR1-256	ENST00000505066	IFNA21	P01568	189 aa		11.86	□□□□□ -0.51
DDR1-256	ENST00000505066	SMIM18	P0DKX4	95 aa		11.86	□□□□□ -0.51
DDR1-256	ENST00000505066	HLA-DRB4	P13762	266 aa		11.86	□□□□□ -0.51
DDR1-256	ENST00000505066	VAMP1	P23763	118 aa		11.86	□□□□□ -0.51
DDR1-256	ENST00000505066	PSMB3	P49720	205 aa		11.86	□□□□□ -0.51
DDR1-256	ENST00000505066	MEOX2	P50222	304 aa		11.86	□□□□□ -0.51
DDR1-256	ENST00000505066	TMED4	Q7Z7H5	227 aa		11.86	□□□□□ -0.51
DDR1-256	ENST00000505066	OR4B1	Q8NGF8	309 aa		11.86	□□□□□ -0.51
DDR1-256	ENST00000505066	HLA-DRB4	X5D2U9	266 aa		11.86	□□□□□ -0.51
DDR1-256	ENST00000505066		X6R8D5	127 aa		11.86	□□□□□ -0.51
DDR1-256	ENST00000505066	IGKV3-20	P01619	116 aa		11.85	□□□□□ -0.51
DDR1-256	ENST00000505066	GIG44	P09565	113 aa	Predicted RBP	11.85	□□□□□ -0.51
DDR1-256	ENST00000505066	GALR1	P47211	349 aa		11.85	□□□□□ -0.51
DDR1-256	ENST00000505066	EMP1	P54849	157 aa		11.85	□□□□□ -0.51
DDR1-256	ENST00000505066	SUPT4H1	P63272	117 aa	Known RBP	11.85	□□□□□ -0.51
DDR1-256	ENST00000505066	FOXI2	Q6ZQN5	318 aa		11.85	□□□□□ -0.51
DDR1-256	ENST00000505066	LINC00336	Q6ZUF6	198 aa		11.85	□□□□□ -0.51
DDR1-256	ENST00000505066	LYZL2	Q7Z4W2	148 aa		11.85	□□□□□ -0.51
DDR1-256	ENST00000505066	S100A7A	Q86SG5	101 aa		11.85	□□□□□ -0.51
DDR1-256	ENST00000505066	UBE2DNL	Q8IWF7	75 aa		11.85	□□□□□ -0.51
DDR1-256	ENST00000505066	RFNG	Q9Y644	331 aa		11.85	□□□□□ -0.51
DDR1-256	ENST00000505066	S100A5	P33763	92 aa		11.84	□□□□□ -0.51
DDR1-256	ENST00000505066	PYDC2	Q56P42	97 aa		11.84	□□□□□ -0.51
DDR1-256	ENST00000505066	TMEM128	Q5BJH2	165 aa		11.84	□□□□□ -0.51
DDR1-256	ENST00000505066	TOMM5	Q8N4H5	51 aa		11.84	□□□□□ -0.51
DDR1-256	ENST00000505066	MCFD2	Q8NI22	146 aa		11.84	□□□□□ -0.51
DDR1-256	ENST00000505066	TMEM208	Q9BTX3	173 aa		11.84	□□□□□ -0.51
DDR1-256	ENST00000505066	RPRM	Q9NS64	109 aa		11.84	□□□□□ -0.51
DDR1-256	ENST00000505066	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.83	□□□□□ -0.52
DDR1-256	ENST00000505066	ISLR	O14498	428 aa		11.83	□□□□□ -0.52
DDR1-256	ENST00000505066	HBE1	P02100	147 aa		11.83	□□□□□ -0.52
DDR1-256	ENST00000505066	AMBP	P02760	352 aa		11.83	□□□□□ -0.52
DDR1-256	ENST00000505066	ALDH3B2	P48448	385 aa		11.83	□□□□□ -0.52
DDR1-256	ENST00000505066	INPP1	P49441	399 aa		11.83	□□□□□ -0.52
DDR1-256	ENST00000505066	GAMT	Q14353	236 aa		11.83	□□□□□ -0.52
DDR1-256	ENST00000505066	CSNK1G2-AS1	Q8NCQ2	148 aa		11.83	□□□□□ -0.52
DDR1-256	ENST00000505066	C16orf92	Q96LL3	132 aa		11.83	□□□□□ -0.52
DDR1-256	ENST00000505066	NEU1	Q99519	415 aa		11.83	□□□□□ -0.52
DDR1-256	ENST00000505066	SLC25A21	Q9BQT8	299 aa	Predicted RBP	11.83	□□□□□ -0.52
DDR1-256	ENST00000505066	PRR13	Q9NZ81	148 aa		11.83	□□□□□ -0.52
DDR1-256	ENST00000505066	PSG9	Q00887	426 aa		11.82	□□□□□ -0.52
DDR1-256	ENST00000505066	OR2F1	Q13607	317 aa		11.82	□□□□□ -0.52
DDR1-256	ENST00000505066	BPIFC	Q8NFQ6	507 aa		11.82	□□□□□ -0.52
DDR1-256	ENST00000505066	DYNC2LI1	Q8TCX1	351 aa		11.82	□□□□□ -0.52

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