RNA–Protein interactions for RNA: ENST00000504813.5

CNBP-208, Transcript of CCHC-type zinc finger nucleic acid binding protein, human

APPRIS ALT1 TSL 2 BASIC

Gene CNBP, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNBP-208	ENST00000504813	TEPP	Q6URK8	271 aa		11.28	□□□□□ -0.6
CNBP-208	ENST00000504813	DPPA3	Q6W0C5	159 aa		11.28	□□□□□ -0.6
CNBP-208	ENST00000504813	USMG5	Q96IX5	58 aa		11.28	□□□□□ -0.6
CNBP-208	ENST00000504813	CXorf58	Q96LI9	332 aa		11.28	□□□□□ -0.6
CNBP-208	ENST00000504813	NPCDR1	Q9BY65	106 aa		11.28	□□□□□ -0.6
CNBP-208	ENST00000504813	KCNIP2	Q9NS61	270 aa		11.28	□□□□□ -0.6
CNBP-208	ENST00000504813	F11R	Q9Y624	299 aa	Known RBP	11.28	□□□□□ -0.6
CNBP-208	ENST00000504813	TRBV9	A0A0B4J1U6	114 aa		11.27	□□□□□ -0.61
CNBP-208	ENST00000504813	ANKRD34B	A5PLL1	514 aa		11.27	□□□□□ -0.61
CNBP-208	ENST00000504813	MB	P02144	154 aa		11.27	□□□□□ -0.61
CNBP-208	ENST00000504813		Q6ZRG5	221 aa		11.27	□□□□□ -0.61
CNBP-208	ENST00000504813	SLC16A13	Q7RTY0	426 aa		11.27	□□□□□ -0.61
CNBP-208	ENST00000504813	COMMD7	Q86VX2	200 aa		11.27	□□□□□ -0.61
CNBP-208	ENST00000504813	TTC9C	Q8N5M4	171 aa		11.27	□□□□□ -0.61
CNBP-208	ENST00000504813	FAM213B	Q8TBF2	198 aa		11.27	□□□□□ -0.61
CNBP-208	ENST00000504813	MISP3	Q96FF7	219 aa		11.27	□□□□□ -0.61
CNBP-208	ENST00000504813	MED9	Q9NWA0	146 aa		11.27	□□□□□ -0.61
CNBP-208	ENST00000504813	ZP3	P21754	424 aa		11.26	□□□□□ -0.61
CNBP-208	ENST00000504813	PLA2G2E	Q9NZK7	142 aa		11.26	□□□□□ -0.61
CNBP-208	ENST00000504813	PEF1	Q9UBV8	284 aa	Known RBP	11.26	□□□□□ -0.61
CNBP-208	ENST00000504813	TRBV12-3	P01733	135 aa		11.25	□□□□□ -0.61
CNBP-208	ENST00000504813	KLF5	Q13887	457 aa	Predicted RBP	11.25	□□□□□ -0.61
CNBP-208	ENST00000504813	PXDC1	Q5TGL8	231 aa		11.25	□□□□□ -0.61
CNBP-208	ENST00000504813	TMEM144	Q7Z5S9	345 aa		11.25	□□□□□ -0.61
CNBP-208	ENST00000504813	RFNG	Q9Y644	331 aa		11.25	□□□□□ -0.61
CNBP-208	ENST00000504813	FAM223B	A6NKX1	122 aa		11.25	□□□□□ -0.61
CNBP-208	ENST00000504813	NPIPB5	A8MRT5	1133 aa		11.25	□□□□□ -0.61
CNBP-208	ENST00000504813	TEX46	H3BTG2	121 aa		11.25	□□□□□ -0.61
CNBP-208	ENST00000504813	CTRB1	P17538	263 aa		11.25	□□□□□ -0.61
CNBP-208	ENST00000504813	ELL	P55199	621 aa	Predicted RBP	11.25	□□□□□ -0.61
CNBP-208	ENST00000504813	RAB2A	P61019	212 aa		11.25	□□□□□ -0.61
CNBP-208	ENST00000504813	RHOG	P84095	191 aa		11.25	□□□□□ -0.61
CNBP-208	ENST00000504813	GAMT	Q14353	236 aa		11.25	□□□□□ -0.61
CNBP-208	ENST00000504813	TMEM41B	Q5BJD5	291 aa		11.25	□□□□□ -0.61
CNBP-208	ENST00000504813	FFAR4	Q5NUL3	377 aa		11.25	□□□□□ -0.61
CNBP-208	ENST00000504813	PVRIG	Q6DKI7	326 aa		11.25	□□□□□ -0.61
CNBP-208	ENST00000504813	CTRB2	Q6GPI1	263 aa		11.25	□□□□□ -0.61
CNBP-208	ENST00000504813	FAM223A	Q8IWN6	122 aa		11.25	□□□□□ -0.61
CNBP-208	ENST00000504813	ACY3	Q96HD9	319 aa		11.25	□□□□□ -0.61
CNBP-208	ENST00000504813	CITED4	Q96RK1	184 aa		11.25	□□□□□ -0.61
CNBP-208	ENST00000504813	HRH4	Q9H3N8	390 aa		11.25	□□□□□ -0.61
CNBP-208	ENST00000504813	CRYGC	P07315	174 aa		11.24	□□□□□ -0.61
CNBP-208	ENST00000504813	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.24	□□□□□ -0.61
CNBP-208	ENST00000504813	MGST2	Q99735	147 aa		11.24	□□□□□ -0.61
CNBP-208	ENST00000504813	ELOVL1	Q9BW60	279 aa		11.24	□□□□□ -0.61
CNBP-208	ENST00000504813	THYN1	Q9P016	225 aa		11.24	□□□□□ -0.61
CNBP-208	ENST00000504813	AGPAT2	O15120	278 aa		11.23	□□□□□ -0.61
CNBP-208	ENST00000504813	IGLV1-51	P01701	117 aa		11.23	□□□□□ -0.61
CNBP-208	ENST00000504813	H2AFB1	P0C5Y9	115 aa		11.23	□□□□□ -0.61
CNBP-208	ENST00000504813	FHIT	P49789	147 aa		11.23	□□□□□ -0.61
CNBP-208	ENST00000504813	MLANA	Q16655	118 aa		11.23	□□□□□ -0.61
CNBP-208	ENST00000504813	IL34	Q6ZMJ4	242 aa		11.23	□□□□□ -0.61
CNBP-208	ENST00000504813	C19orf35	Q6ZS72	473 aa		11.23	□□□□□ -0.61
CNBP-208	ENST00000504813	NECAP1	Q8NC96	275 aa		11.23	□□□□□ -0.61
CNBP-208	ENST00000504813	OR9G4	Q8NGQ1	327 aa		11.23	□□□□□ -0.61
CNBP-208	ENST00000504813	MT-CO2	P00403	227 aa		11.22	□□□□□ -0.61
CNBP-208	ENST00000504813	HBE1	P02100	147 aa		11.22	□□□□□ -0.61
CNBP-208	ENST00000504813	GP9	P14770	177 aa		11.22	□□□□□ -0.61
CNBP-208	ENST00000504813	S100A1	P23297	94 aa		11.22	□□□□□ -0.61
CNBP-208	ENST00000504813	MFAP2	P55001	183 aa		11.22	□□□□□ -0.61
CNBP-208	ENST00000504813	SYNJ2BP	P57105	145 aa		11.22	□□□□□ -0.61
CNBP-208	ENST00000504813	ATP5G2	Q06055	141 aa		11.22	□□□□□ -0.61
CNBP-208	ENST00000504813	KLK9	Q2XQG4	91 aa		11.22	□□□□□ -0.61
CNBP-208	ENST00000504813	OR10G4	Q8NGN3	311 aa		11.22	□□□□□ -0.61
CNBP-208	ENST00000504813	OR10G9	Q8NGN4	311 aa		11.22	□□□□□ -0.61
CNBP-208	ENST00000504813	OR10G7	Q8NGN6	311 aa		11.22	□□□□□ -0.61
CNBP-208	ENST00000504813	MARC2	Q969Z3	335 aa		11.22	□□□□□ -0.61
CNBP-208	ENST00000504813	FANCD2OS	Q96PS1	177 aa		11.22	□□□□□ -0.61
CNBP-208	ENST00000504813	GGTLC1	Q9BX51	225 aa		11.22	□□□□□ -0.61
CNBP-208	ENST00000504813	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.22	□□□□□ -0.61
CNBP-208	ENST00000504813	RPRM	Q9NS64	109 aa		11.22	□□□□□ -0.61
CNBP-208	ENST00000504813	KLK9	Q9UKQ9	250 aa		11.22	□□□□□ -0.61
CNBP-208	ENST00000504813	PXMP4	Q9Y6I8	212 aa		11.22	□□□□□ -0.61
CNBP-208	ENST00000504813	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	11.21	□□□□□ -0.61
CNBP-208	ENST00000504813	BMPR1B	O00238	502 aa		11.21	□□□□□ -0.61
CNBP-208	ENST00000504813	OR2J3	O76001	311 aa		11.21	□□□□□ -0.61
CNBP-208	ENST00000504813	HIST1H1B	P16401	226 aa	Known RBP	11.21	□□□□□ -0.61
CNBP-208	ENST00000504813	RPL29	P47914	159 aa	Known RBP	11.21	□□□□□ -0.61
CNBP-208	ENST00000504813	RND2	P52198	227 aa		11.21	□□□□□ -0.61
CNBP-208	ENST00000504813	RPEL1	Q2QD12	228 aa		11.21	□□□□□ -0.61
CNBP-208	ENST00000504813	C15orf32	Q32M92	178 aa		11.21	□□□□□ -0.61
CNBP-208	ENST00000504813	NPIPB3	Q92617	1050 aa		11.21	□□□□□ -0.61
CNBP-208	ENST00000504813	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.21	□□□□□ -0.61
CNBP-208	ENST00000504813	DMRT1	Q9Y5R6	373 aa		11.21	□□□□□ -0.61
CNBP-208	ENST00000504813	SMAD5-AS1	Q9Y6J3	95 aa		11.21	□□□□□ -0.61
CNBP-208	ENST00000504813	RAB19	A4D1S5	217 aa		11.2	□□□□□ -0.62
CNBP-208	ENST00000504813	ZFP92	A6NM28	416 aa		11.2	□□□□□ -0.62
CNBP-208	ENST00000504813	NHLRC4	P0CG21	123 aa	Predicted RBP	11.2	□□□□□ -0.62
CNBP-208	ENST00000504813	M6PR	P20645	277 aa		11.2	□□□□□ -0.62
CNBP-208	ENST00000504813	OR10J1	P30954	320 aa		11.2	□□□□□ -0.62
CNBP-208	ENST00000504813	B2M	P61769	119 aa		11.2	□□□□□ -0.62
CNBP-208	ENST00000504813	MIC13	Q5XKP0	118 aa		11.2	□□□□□ -0.62
CNBP-208	ENST00000504813	SFT2D1	Q8WV19	159 aa		11.2	□□□□□ -0.62
CNBP-208	ENST00000504813	VSIR	Q9H7M9	311 aa		11.2	□□□□□ -0.62
CNBP-208	ENST00000504813	MFSD2B	A6NFX1	497 aa		11.19	□□□□□ -0.62
CNBP-208	ENST00000504813	IGHV3-48	P01763	117 aa		11.19	□□□□□ -0.62
CNBP-208	ENST00000504813	CSN3	P07498	182 aa		11.19	□□□□□ -0.62
CNBP-208	ENST00000504813	STPG3	Q8N7X2	389 aa		11.19	□□□□□ -0.62
CNBP-208	ENST00000504813	THAP8	Q8NA92	274 aa		11.19	□□□□□ -0.62
CNBP-208	ENST00000504813	TMEM116	Q8NCL8	245 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms