RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 OR5C1Q8NGR4 320 aa7.64□□□□□ -1.19
NUP54-203ENST00000504173 Q8WTZ3 238 aa7.64□□□□□ -1.19
NUP54-203ENST00000504173 TRGV9Q99603 122 aa7.64□□□□□ -1.19
NUP54-203ENST00000504173 TMEM147Q9BVK8 224 aa7.64□□□□□ -1.19
NUP54-203ENST00000504173 NPVFQ9HCQ7 196 aa7.64□□□□□ -1.19
NUP54-203ENST00000504173 UQCC1Q9NVA1 299 aa7.64□□□□□ -1.19
NUP54-203ENST00000504173 UFC1Q9Y3C8 167 aa7.64□□□□□ -1.19
NUP54-203ENST00000504173 HSPB11Q9Y547 144 aa7.64□□□□□ -1.19
NUP54-203ENST00000504173 PUS1Q9Y606 427 aaKnown RBP eCLIP7.64□□□□□ -1.19
NUP54-203ENST00000504173 IGKV1OR2-108A0A075B7D4 117 aa7.63□□□□□ -1.19
NUP54-203ENST00000504173 UBE2L5PA0A1B0GUS4 154 aa7.63□□□□□ -1.19
NUP54-203ENST00000504173 A0A1B0GVG6 124 aa7.63□□□□□ -1.19
NUP54-203ENST00000504173 A8MWP6 167 aa7.63□□□□□ -1.19
NUP54-203ENST00000504173 G3V3Q6 166 aa7.63□□□□□ -1.19
NUP54-203ENST00000504173 ZNF207O43670 478 aaKnown RBP7.63□□□□□ -1.19
NUP54-203ENST00000504173 SAP30O75446 220 aa7.63□□□□□ -1.19
NUP54-203ENST00000504173 TOMM40O96008 361 aa7.63□□□□□ -1.19
NUP54-203ENST00000504173 RD3LP0DJH9 198 aa7.63□□□□□ -1.19
NUP54-203ENST00000504173 PSG1P11464 419 aa7.63□□□□□ -1.19
NUP54-203ENST00000504173 ZNF90Q03938 601 aa7.63□□□□□ -1.19
NUP54-203ENST00000504173 OR2F1Q13607 317 aa7.63□□□□□ -1.19
NUP54-203ENST00000504173 CLINT1Q14677 625 aa7.63□□□□□ -1.19
NUP54-203ENST00000504173 TM4SF20Q53R12 229 aa7.63□□□□□ -1.19
NUP54-203ENST00000504173 C9orf66Q5T8R8 295 aa7.63□□□□□ -1.19
NUP54-203ENST00000504173 TEPPQ6URK8 271 aa7.63□□□□□ -1.19
NUP54-203ENST00000504173 INO80EQ8NBZ0 244 aaPredicted RBP7.63□□□□□ -1.19
NUP54-203ENST00000504173 ZNF414Q96IQ9 312 aa7.63□□□□□ -1.19
NUP54-203ENST00000504173 GINS3Q9BRX5 216 aa7.63□□□□□ -1.19
NUP54-203ENST00000504173 GPR61Q9BZJ8 451 aa7.63□□□□□ -1.19
NUP54-203ENST00000504173 SMIM3Q9BZL3 60 aa7.63□□□□□ -1.19
NUP54-203ENST00000504173 TMEM213A2RRL7 107 aa7.62□□□□□ -1.19
NUP54-203ENST00000504173 C2orf70A6NJV1 201 aa7.62□□□□□ -1.19
NUP54-203ENST00000504173 IL4P05112 153 aa7.62□□□□□ -1.19
NUP54-203ENST00000504173 CSN3P07498 182 aa7.62□□□□□ -1.19
NUP54-203ENST00000504173 ELLP55199 621 aaPredicted RBP7.62□□□□□ -1.19
NUP54-203ENST00000504173 VWC2Q2TAL6 325 aa7.62□□□□□ -1.19
NUP54-203ENST00000504173 CYP2G1PQ6ZSU1 146 aa7.62□□□□□ -1.19
NUP54-203ENST00000504173 ZNF546Q86UE3 836 aa7.62□□□□□ -1.19
NUP54-203ENST00000504173 AKAP14Q86UN6 197 aa7.62□□□□□ -1.19
NUP54-203ENST00000504173 OR51G1Q8NGK1 321 aa7.62□□□□□ -1.19
NUP54-203ENST00000504173 DYNLRB2Q8TF09 96 aa7.62□□□□□ -1.19
NUP54-203ENST00000504173 ST6GAL2Q96JF0 529 aa7.62□□□□□ -1.19
NUP54-203ENST00000504173 AQP10Q96PS8 301 aa7.62□□□□□ -1.19
NUP54-203ENST00000504173 ZFAND3Q9H8U3 227 aa7.62□□□□□ -1.19
NUP54-203ENST00000504173 DAZ1Q9NQZ3 744 aaKnown RBP7.62□□□□□ -1.19
NUP54-203ENST00000504173 K7EMT4 169 aa7.61□□□□□ -1.19
NUP54-203ENST00000504173 DFFBO76075 338 aa7.61□□□□□ -1.19
NUP54-203ENST00000504173 FOLR2P14207 255 aa7.61□□□□□ -1.19
NUP54-203ENST00000504173 FGF7P21781 194 aa7.61□□□□□ -1.19
NUP54-203ENST00000504173 INSL3P51460 131 aa7.61□□□□□ -1.19
NUP54-203ENST00000504173 LYZP61626 148 aa7.61□□□□□ -1.19
NUP54-203ENST00000504173 RAB31Q13636 194 aa7.61□□□□□ -1.19
NUP54-203ENST00000504173 OXLD1Q5BKU9 147 aa7.61□□□□□ -1.19
NUP54-203ENST00000504173 DMRTA1Q5VZB9 504 aa7.61□□□□□ -1.19
NUP54-203ENST00000504173 BTNL8Q6UX41 500 aa7.61□□□□□ -1.19
NUP54-203ENST00000504173 IL34Q6ZMJ4 242 aa7.61□□□□□ -1.19
NUP54-203ENST00000504173 BPIFCQ8NFQ6 507 aa7.61□□□□□ -1.19
NUP54-203ENST00000504173 MARC2Q969Z3 335 aa7.61□□□□□ -1.19
NUP54-203ENST00000504173 METTL26Q96S19 204 aa7.61□□□□□ -1.19
NUP54-203ENST00000504173 ATP5SQ99766 215 aa7.61□□□□□ -1.19
NUP54-203ENST00000504173 PBDC1Q9BVG4 233 aa7.61□□□□□ -1.19
NUP54-203ENST00000504173 MRPL27Q9P0M9 148 aaKnown RBP7.61□□□□□ -1.19
NUP54-203ENST00000504173 TNFSF18Q9UNG2 199 aa7.61□□□□□ -1.19
NUP54-203ENST00000504173 WDR83OSQ9Y284 106 aa7.61□□□□□ -1.19
NUP54-203ENST00000504173 LSM4Q9Y4Z0 139 aaKnown RBP7.61□□□□□ -1.19
NUP54-203ENST00000504173 RNF222A6NCQ9 220 aa7.6□□□□□ -1.19
NUP54-203ENST00000504173 AGPAT2O15120 278 aa7.6□□□□□ -1.19
NUP54-203ENST00000504173 ARPC5O15511 151 aa7.6□□□□□ -1.19
NUP54-203ENST00000504173 MPDU1O75352 247 aa7.6□□□□□ -1.19
NUP54-203ENST00000504173 CFDP00746 253 aaPredicted RBP7.6□□□□□ -1.19
NUP54-203ENST00000504173 IFNA5P01569 189 aa7.6□□□□□ -1.19
NUP54-203ENST00000504173 LINC00869P0C866 280 aa7.6□□□□□ -1.19
NUP54-203ENST00000504173 EDN2P20800 178 aa7.6□□□□□ -1.19
NUP54-203ENST00000504173 CBLN1P23435 193 aa7.6□□□□□ -1.19
NUP54-203ENST00000504173 NPPCP23582 126 aa7.6□□□□□ -1.19
NUP54-203ENST00000504173 GATA2P23769 480 aaPredicted RBP7.6□□□□□ -1.19
NUP54-203ENST00000504173 BMI1P35226 326 aa7.6□□□□□ -1.19
NUP54-203ENST00000504173 CAMLGP49069 296 aa7.6□□□□□ -1.19
NUP54-203ENST00000504173 AP2S1P53680 142 aaPredicted RBP7.6□□□□□ -1.19
NUP54-203ENST00000504173 SELENOTP62341 195 aa7.6□□□□□ -1.19
NUP54-203ENST00000504173 CASC10Q5T4H9 136 aa7.6□□□□□ -1.19
NUP54-203ENST00000504173 TMEM182Q6ZP80 229 aaPredicted RBP7.6□□□□□ -1.19
NUP54-203ENST00000504173 TCTE3Q8IZS6 198 aa7.6□□□□□ -1.19
NUP54-203ENST00000504173 RNF125Q96EQ8 232 aa7.6□□□□□ -1.19
NUP54-203ENST00000504173 NARS2Q96I59 477 aaKnown RBP7.6□□□□□ -1.19
NUP54-203ENST00000504173 MGST2Q99735 147 aa7.6□□□□□ -1.19
NUP54-203ENST00000504173 SIGLEC8Q9NYZ4 499 aa7.6□□□□□ -1.19
NUP54-203ENST00000504173 FBXL17Q9UF56 701 aa7.6□□□□□ -1.19
NUP54-203ENST00000504173 RABAC1Q9UI14 185 aa7.6□□□□□ -1.19
NUP54-203ENST00000504173 IGHV3OR16-13A0A075B7E8 117 aa7.59□□□□□ -1.19
NUP54-203ENST00000504173 IGHV3-49A0A0A0MS15 119 aa7.59□□□□□ -1.19
NUP54-203ENST00000504173 IGHV3-74A0A0B4J1X5 117 aa7.59□□□□□ -1.19
NUP54-203ENST00000504173 IGHV7-4-1A0A0J9YVY3 117 aa7.59□□□□□ -1.19
NUP54-203ENST00000504173 WI2-2373I1.2A0A1W2PRP0 233 aa7.59□□□□□ -1.19
NUP54-203ENST00000504173 K7EIL1 84 aa7.59□□□□□ -1.19
NUP54-203ENST00000504173 HNRNPCP07910 306 aaKnown RBP eCLIP7.59□□□□□ -1.19
NUP54-203ENST00000504173 C8orf88P0DMB2 117 aa7.59□□□□□ -1.19
NUP54-203ENST00000504173 USF2Q15853 346 aaPredicted RBP7.59□□□□□ -1.19
NUP54-203ENST00000504173 ADAMTSL5Q6ZMM2 481 aa7.59□□□□□ -1.19
NUP54-203ENST00000504173 OR11H4Q8NGC9 324 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms