RNA–Protein interactions for RNA: ENST00000504073.1

SGCA-204, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-204ENST00000504073 ZNF600Q6ZNG1 722 aa11.73□□□□□ -0.53
SGCA-204ENST00000504073 RNF152Q8N8N0 203 aa11.73□□□□□ -0.53
SGCA-204ENST00000504073 OR10G4Q8NGN3 311 aa11.73□□□□□ -0.53
SGCA-204ENST00000504073 OR10G9Q8NGN4 311 aa11.73□□□□□ -0.53
SGCA-204ENST00000504073 OR10G7Q8NGN6 311 aa11.73□□□□□ -0.53
SGCA-204ENST00000504073 FAM213BQ8TBF2 198 aa11.73□□□□□ -0.53
SGCA-204ENST00000504073 UBE2E2Q96LR5 201 aa11.73□□□□□ -0.53
SGCA-204ENST00000504073 IGKV1OR2-108A0A075B7D4 117 aa11.72□□□□□ -0.53
SGCA-204ENST00000504073 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.72□□□□□ -0.53
SGCA-204ENST00000504073 CLPSL1A2RUU4 121 aa11.72□□□□□ -0.53
SGCA-204ENST00000504073 OR2T8A6NH00 312 aa11.72□□□□□ -0.53
SGCA-204ENST00000504073 WIPF1O43516 503 aa11.72□□□□□ -0.53
SGCA-204ENST00000504073 ARL3P36405 182 aa11.72□□□□□ -0.53
SGCA-204ENST00000504073 TAS2R45P59539 299 aa11.72□□□□□ -0.53
SGCA-204ENST00000504073 NDUFA5Q16718 116 aa11.72□□□□□ -0.53
SGCA-204ENST00000504073 FAM74A1Q5RGS3 127 aa11.72□□□□□ -0.53
SGCA-204ENST00000504073 ZNF343Q6P1L6 599 aa11.72□□□□□ -0.53
SGCA-204ENST00000504073 MRPL32Q9BYC8 188 aaKnown RBP11.72□□□□□ -0.53
SGCA-204ENST00000504073 MRPL36Q9P0J6 103 aaKnown RBP11.72□□□□□ -0.53
SGCA-204ENST00000504073 S4R3C0 116 aa11.72□□□□□ -0.53
SGCA-204ENST00000504073 IGKV1D-37A0A075B6S9 117 aa11.71□□□□□ -0.53
SGCA-204ENST00000504073 CTXND1A0A1B0GTU2 59 aa11.71□□□□□ -0.53
SGCA-204ENST00000504073 BMPR1BO00238 502 aa11.71□□□□□ -0.53
SGCA-204ENST00000504073 HYPMO75409 117 aa11.71□□□□□ -0.53
SGCA-204ENST00000504073 IGHV3-23P01764 117 aa11.71□□□□□ -0.53
SGCA-204ENST00000504073 H2AFB1P0C5Y9 115 aa11.71□□□□□ -0.53
SGCA-204ENST00000504073 OR5G3P0C626 314 aa11.71□□□□□ -0.53
SGCA-204ENST00000504073 PSG1P11464 419 aa11.71□□□□□ -0.53
SGCA-204ENST00000504073 CDC34P49427 236 aaPredicted RBP11.71□□□□□ -0.53
SGCA-204ENST00000504073 ZNF90Q03938 601 aa11.71□□□□□ -0.53
SGCA-204ENST00000504073 KHDC1LQ5JSQ8 128 aa11.71□□□□□ -0.53
SGCA-204ENST00000504073 C10orf113Q5VZT2 155 aa11.71□□□□□ -0.53
SGCA-204ENST00000504073 NARS2Q96I59 477 aaKnown RBP11.71□□□□□ -0.53
SGCA-204ENST00000504073 KLK15Q9H2R5 256 aa11.71□□□□□ -0.53
SGCA-204ENST00000504073 DNAJC4Q9NNZ3 241 aa11.71□□□□□ -0.53
SGCA-204ENST00000504073 PEF1Q9UBV8 284 aaKnown RBP11.71□□□□□ -0.53
SGCA-204ENST00000504073 RNF114Q9Y508 228 aa11.71□□□□□ -0.53
SGCA-204ENST00000504073 NUDT19A8MXV4 375 aa11.7□□□□□ -0.54
SGCA-204ENST00000504073 GGCTO75223 188 aaKnown RBP11.7□□□□□ -0.54
SGCA-204ENST00000504073 IGKV1-17P01599 117 aa11.7□□□□□ -0.54
SGCA-204ENST00000504073 PLP1P60201 277 aa11.7□□□□□ -0.54
SGCA-204ENST00000504073 LYZP61626 148 aa11.7□□□□□ -0.54
SGCA-204ENST00000504073 FOXL1Q12952 345 aa11.7□□□□□ -0.54
SGCA-204ENST00000504073 FAM122CQ6P4D5 195 aa11.7□□□□□ -0.54
SGCA-204ENST00000504073 ZNF491Q8N8L2 437 aa11.7□□□□□ -0.54
SGCA-204ENST00000504073 LINC01006Q8NI28 216 aa11.7□□□□□ -0.54
SGCA-204ENST00000504073 RNF125Q96EQ8 232 aa11.7□□□□□ -0.54
SGCA-204ENST00000504073 CCDC140Q96MF4 163 aa11.7□□□□□ -0.54
SGCA-204ENST00000504073 RPRMQ9NS64 109 aa11.7□□□□□ -0.54
SGCA-204ENST00000504073 HIGD1AQ9Y241 93 aa11.7□□□□□ -0.54
SGCA-204ENST00000504073 OR2C1O95371 312 aa11.69□□□□□ -0.54
SGCA-204ENST00000504073 IGHV3-11P01762 117 aa11.69□□□□□ -0.54
SGCA-204ENST00000504073 RPLP1P05386 114 aaKnown RBP11.69□□□□□ -0.54
SGCA-204ENST00000504073 CTSGP08311 255 aa11.69□□□□□ -0.54
SGCA-204ENST00000504073 LGALS1P09382 135 aaKnown RBP11.69□□□□□ -0.54
SGCA-204ENST00000504073 ORM2P19652 201 aa11.69□□□□□ -0.54
SGCA-204ENST00000504073 CDX1P47902 265 aaPredicted RBP11.69□□□□□ -0.54
SGCA-204ENST00000504073 DEFA5Q01523 94 aa11.69□□□□□ -0.54
SGCA-204ENST00000504073 FAM106AQ4KMX7 169 aa11.69□□□□□ -0.54
SGCA-204ENST00000504073 STXBP6Q8NFX7 210 aa11.69□□□□□ -0.54
SGCA-204ENST00000504073 OR1B1Q8NGR6 318 aa11.69□□□□□ -0.54
SGCA-204ENST00000504073 PBDC1Q9BVG4 233 aa11.69□□□□□ -0.54
SGCA-204ENST00000504073 TECRQ9NZ01 308 aaKnown RBP11.69□□□□□ -0.54
SGCA-204ENST00000504073 SEC14L6B5MCN3 397 aa11.68□□□□□ -0.54
SGCA-204ENST00000504073 HAX1O00165 279 aa11.68□□□□□ -0.54
SGCA-204ENST00000504073 YIF1AO95070 293 aa11.68□□□□□ -0.54
SGCA-204ENST00000504073 IL4P05112 153 aa11.68□□□□□ -0.54
SGCA-204ENST00000504073 NMBP08949 121 aa11.68□□□□□ -0.54
SGCA-204ENST00000504073 BMI1P35226 326 aa11.68□□□□□ -0.54
SGCA-204ENST00000504073 PPT1P50897 306 aa11.68□□□□□ -0.54
SGCA-204ENST00000504073 KHDC3LQ587J8 217 aa11.68□□□□□ -0.54
SGCA-204ENST00000504073 FAM78BQ5VT40 261 aa11.68□□□□□ -0.54
SGCA-204ENST00000504073 MYOZ3Q8TDC0 251 aa11.68□□□□□ -0.54
SGCA-204ENST00000504073 SFT2D1Q8WV19 159 aa11.68□□□□□ -0.54
SGCA-204ENST00000504073 DPF1Q92782 380 aa11.68□□□□□ -0.54
SGCA-204ENST00000504073 RABAC1Q9UI14 185 aa11.68□□□□□ -0.54
SGCA-204ENST00000504073 FUT9Q9Y231 359 aa11.68□□□□□ -0.54
SGCA-204ENST00000504073 MAP1LC3B2A6NCE7 125 aa11.67□□□□□ -0.54
SGCA-204ENST00000504073 F8W735 103 aaPredicted RBP11.67□□□□□ -0.54
SGCA-204ENST00000504073 NDUFA4O00483 81 aa11.67□□□□□ -0.54
SGCA-204ENST00000504073 IFNA1P01562 189 aa11.67□□□□□ -0.54
SGCA-204ENST00000504073 ZP3P21754 424 aa11.67□□□□□ -0.54
SGCA-204ENST00000504073 GATA2P23769 480 aaPredicted RBP11.67□□□□□ -0.54
SGCA-204ENST00000504073 RPEL1Q2QD12 228 aa11.67□□□□□ -0.54
SGCA-204ENST00000504073 C4orf3Q8WVX3 66 aa11.67□□□□□ -0.54
SGCA-204ENST00000504073 RAB24Q969Q5 203 aa11.67□□□□□ -0.54
SGCA-204ENST00000504073 RCC1LQ96I51 464 aaKnown RBP11.67□□□□□ -0.54
SGCA-204ENST00000504073 METTL26Q96S19 204 aa11.67□□□□□ -0.54
SGCA-204ENST00000504073 MAP1LC3BQ9GZQ8 125 aa11.67□□□□□ -0.54
SGCA-204ENST00000504073 SLC25A22Q9H936 323 aa11.67□□□□□ -0.54
SGCA-204ENST00000504073 DOK5Q9P104 306 aa11.67□□□□□ -0.54
SGCA-204ENST00000504073 TSSC4Q9Y5U2 329 aaPredicted RBP11.67□□□□□ -0.54
SGCA-204ENST00000504073 PUS1Q9Y606 427 aaKnown RBP eCLIP11.67□□□□□ -0.54
SGCA-204ENST00000504073 TRAV1-1A0A0B4J248 108 aa11.66□□□□□ -0.54
SGCA-204ENST00000504073 ANKRD34BA5PLL1 514 aa11.66□□□□□ -0.54
SGCA-204ENST00000504073 CXorf1O96002 111 aa11.66□□□□□ -0.54
SGCA-204ENST00000504073 HSPB1P04792 205 aaKnown RBP11.66□□□□□ -0.54
SGCA-204ENST00000504073 ADMP35318 185 aa11.66□□□□□ -0.54
SGCA-204ENST00000504073 TAGLN2P37802 199 aaKnown RBP11.66□□□□□ -0.54
SGCA-204ENST00000504073 PQLC2Q6ZP29 291 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms