RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 EBI3Q14213 229 aa17.79■□□□□ 0.44
PCDH1-204ENST00000503492 AKAP6Q13023 2319 aa17.78■□□□□ 0.44
PCDH1-204ENST00000503492 TMEM8BA6NDV4 472 aa17.78■□□□□ 0.44
PCDH1-204ENST00000503492 NCBP2LA6PVI3 153 aaKnown RBP17.78■□□□□ 0.44
PCDH1-204ENST00000503492 LYZP61626 148 aa17.78■□□□□ 0.44
PCDH1-204ENST00000503492 RANP62826 216 aaKnown RBP17.78■□□□□ 0.44
PCDH1-204ENST00000503492 KLF17Q5JT82 389 aaPredicted RBP17.78■□□□□ 0.44
PCDH1-204ENST00000503492 ASPHD1Q5U4P2 390 aa17.78■□□□□ 0.44
PCDH1-204ENST00000503492 LEMD1Q68G75 181 aa17.78■□□□□ 0.44
PCDH1-204ENST00000503492 BLNKQ8WV28 456 aa17.78■□□□□ 0.44
PCDH1-204ENST00000503492 RASL11BQ9BPW5 248 aa17.78■□□□□ 0.44
PCDH1-204ENST00000503492 RNASE7Q9H1E1 156 aaKnown RBP17.78■□□□□ 0.44
PCDH1-204ENST00000503492 CDC42EP3Q9UKI2 254 aa17.78■□□□□ 0.44
PCDH1-204ENST00000503492 TAS2R60P59551 318 aa17.77■□□□□ 0.44
PCDH1-204ENST00000503492 NDPQ00604 133 aa17.77■□□□□ 0.44
PCDH1-204ENST00000503492 ZNF562Q6V9R5 426 aa17.77■□□□□ 0.44
PCDH1-204ENST00000503492 PEX7O00628 323 aa17.77■□□□□ 0.44
PCDH1-204ENST00000503492 GP9P14770 177 aa17.77■□□□□ 0.44
PCDH1-204ENST00000503492 OR1L6Q8NGR2 347 aa17.77■□□□□ 0.44
PCDH1-204ENST00000503492 NIT2Q9NQR4 276 aa17.77■□□□□ 0.44
PCDH1-204ENST00000503492 HIGD1AQ9Y241 93 aa17.77■□□□□ 0.44
PCDH1-204ENST00000503492 NBEAP1P0C6P0 100 aa17.76■□□□□ 0.43
PCDH1-204ENST00000503492 RBM14Q96PK6 669 aaKnown RBP17.76■□□□□ 0.43
PCDH1-204ENST00000503492 TRAPPC1Q9Y5R8 145 aa17.76■□□□□ 0.43
PCDH1-204ENST00000503492 XKRY2A2RUG3 117 aa17.76■□□□□ 0.43
PCDH1-204ENST00000503492 CNN1P51911 297 aaKnown RBP17.76■□□□□ 0.43
PCDH1-204ENST00000503492 OR10D4PQ8NGN7 298 aa17.76■□□□□ 0.43
PCDH1-204ENST00000503492 ARPC1AQ92747 370 aa17.76■□□□□ 0.43
PCDH1-204ENST00000503492 AJUBAQ96IF1 538 aa17.76■□□□□ 0.43
PCDH1-204ENST00000503492 OSTCQ9NRP0 149 aa17.76■□□□□ 0.43
PCDH1-204ENST00000503492 IGHV4-39P01824 125 aa17.75■□□□□ 0.43
PCDH1-204ENST00000503492 MGST1P10620 155 aaKnown RBP17.75■□□□□ 0.43
PCDH1-204ENST00000503492 TMEM11P17152 192 aa17.75■□□□□ 0.43
PCDH1-204ENST00000503492 GNG5P63218 68 aa17.75■□□□□ 0.43
PCDH1-204ENST00000503492 RPEL1Q2QD12 228 aa17.75■□□□□ 0.43
PCDH1-204ENST00000503492 TMEM183AQ8IXX5 376 aa17.75■□□□□ 0.43
PCDH1-204ENST00000503492 TBL2Q9Y4P3 447 aaKnown RBP17.75■□□□□ 0.43
PCDH1-204ENST00000503492 TRAV9-1A0A075B6T8 112 aa17.75■□□□□ 0.43
PCDH1-204ENST00000503492 TRAV34A0A0B4J273 112 aa17.75■□□□□ 0.43
PCDH1-204ENST00000503492 UBE2E1P51965 193 aa17.75■□□□□ 0.43
PCDH1-204ENST00000503492 COA6Q5JTJ3 125 aaKnown RBP17.75■□□□□ 0.43
PCDH1-204ENST00000503492 NHLRC2Q8NBF2 726 aa17.75■□□□□ 0.43
PCDH1-204ENST00000503492 FANCD2OSQ96PS1 177 aa17.75■□□□□ 0.43
PCDH1-204ENST00000503492 ISLRO14498 428 aa17.74■□□□□ 0.43
PCDH1-204ENST00000503492 RD3LP0DJH9 198 aa17.74■□□□□ 0.43
PCDH1-204ENST00000503492 FABP4P15090 132 aa17.74■□□□□ 0.43
PCDH1-204ENST00000503492 PYY3Q5JQD4 70 aa17.74■□□□□ 0.43
PCDH1-204ENST00000503492 NPIPB5A8MRT5 1133 aa17.74■□□□□ 0.43
PCDH1-204ENST00000503492 SLC25A39Q9BZJ4 359 aaPredicted RBP17.74■□□□□ 0.43
PCDH1-204ENST00000503492 MRPL27Q9P0M9 148 aaKnown RBP17.74■□□□□ 0.43
PCDH1-204ENST00000503492 EPDR1Q9UM22 224 aa17.74■□□□□ 0.43
PCDH1-204ENST00000503492 S4R3C0 116 aa17.74■□□□□ 0.43
PCDH1-204ENST00000503492 IGLV11-55A0A075B6I3 123 aa17.73■□□□□ 0.43
PCDH1-204ENST00000503492 PGPA6NDG6 321 aa17.73■□□□□ 0.43
PCDH1-204ENST00000503492 FAM120AOSQ5T036 256 aa17.73■□□□□ 0.43
PCDH1-204ENST00000503492 HIST1H2BLQ99880 126 aa17.73■□□□□ 0.43
PCDH1-204ENST00000503492 H3BTX0 84 aa17.73■□□□□ 0.43
PCDH1-204ENST00000503492 SLC25A5P05141 298 aaKnown RBP17.73■□□□□ 0.43
PCDH1-204ENST00000503492 YPEL3P61236 119 aaPredicted RBP17.73■□□□□ 0.43
PCDH1-204ENST00000503492 HIST1H1BP16401 226 aaKnown RBP17.72■□□□□ 0.43
PCDH1-204ENST00000503492 IBA57Q5T440 356 aaKnown RBP17.72■□□□□ 0.43
PCDH1-204ENST00000503492 ZNF600Q6ZNG1 722 aa17.72■□□□□ 0.43
PCDH1-204ENST00000503492 OR8I2Q8N0Y5 310 aa17.72■□□□□ 0.43
PCDH1-204ENST00000503492 TTC9CQ8N5M4 171 aa17.72■□□□□ 0.43
PCDH1-204ENST00000503492 PDLIM4P50479 330 aa17.72■□□□□ 0.43
PCDH1-204ENST00000503492 BAGE2Q86Y30 109 aa17.72■□□□□ 0.43
PCDH1-204ENST00000503492 LPAR2Q9HBW0 351 aa17.72■□□□□ 0.43
PCDH1-204ENST00000503492 SAA4P35542 130 aa17.71■□□□□ 0.43
PCDH1-204ENST00000503492 Q8N9W7 124 aa17.71■□□□□ 0.43
PCDH1-204ENST00000503492 IGHV7-81A0A0B4J1V7 117 aa17.7■□□□□ 0.42
PCDH1-204ENST00000503492 FABP1P07148 127 aa17.7■□□□□ 0.42
PCDH1-204ENST00000503492 FRMD6-AS1P0C7T7 363 aa17.7■□□□□ 0.42
PCDH1-204ENST00000503492 FAM106CPP0CH98 169 aa17.7■□□□□ 0.42
PCDH1-204ENST00000503492 EGR2P11161 476 aaPredicted RBP17.7■□□□□ 0.42
PCDH1-204ENST00000503492 CBLN1P23435 193 aa17.7■□□□□ 0.42
PCDH1-204ENST00000503492 TMEM183BQ1AE95 376 aa17.7■□□□□ 0.42
PCDH1-204ENST00000503492 TOMM40O96008 361 aa17.69■□□□□ 0.42
PCDH1-204ENST00000503492 Q9H3A6 140 aa17.69■□□□□ 0.42
PCDH1-204ENST00000503492 TMEM14CQ9P0S9 112 aa17.69■□□□□ 0.42
PCDH1-204ENST00000503492 ADMP35318 185 aa17.69■□□□□ 0.42
PCDH1-204ENST00000503492 ZNF491Q8N8L2 437 aa17.69■□□□□ 0.42
PCDH1-204ENST00000503492 ZNF586Q9NXT0 402 aa17.69■□□□□ 0.42
PCDH1-204ENST00000503492 RPH3ALQ9UNE2 315 aa17.69■□□□□ 0.42
PCDH1-204ENST00000503492 S100A12P80511 92 aa17.68■□□□□ 0.42
PCDH1-204ENST00000503492 SGK494Q96LW2 274 aa17.68■□□□□ 0.42
PCDH1-204ENST00000503492 PACRGQ96M98 296 aaPredicted RBP17.68■□□□□ 0.42
PCDH1-204ENST00000503492 KLF12Q9Y4X4 402 aa17.68■□□□□ 0.42
PCDH1-204ENST00000503492 F8W735 103 aaPredicted RBP17.68■□□□□ 0.42
PCDH1-204ENST00000503492 AMBPP02760 352 aa17.68■□□□□ 0.42
PCDH1-204ENST00000503492 PIP4P2Q8N4L2 257 aa17.68■□□□□ 0.42
PCDH1-204ENST00000503492 SHANK2-AS3Q9BTD1 123 aa17.68■□□□□ 0.42
PCDH1-204ENST00000503492 SERTAD4Q9NUC0 356 aa17.68■□□□□ 0.42
PCDH1-204ENST00000503492 GNG7O60262 68 aa17.67■□□□□ 0.42
PCDH1-204ENST00000503492 MFAP4P55083 255 aa17.67■□□□□ 0.42
PCDH1-204ENST00000503492 UBE2G1P62253 170 aa17.67■□□□□ 0.42
PCDH1-204ENST00000503492 CDPF1Q6NVV7 123 aa17.67■□□□□ 0.42
PCDH1-204ENST00000503492 C5orf17Q8NAS9 161 aa17.67■□□□□ 0.42
PCDH1-204ENST00000503492 RNF125Q96EQ8 232 aa17.67■□□□□ 0.42
PCDH1-204ENST00000503492 GSN-AS1Q9NRJ2 163 aa17.67■□□□□ 0.42
PCDH1-204ENST00000503492 ZNF705GA8MUZ8 300 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms