RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 MOSP00540 346 aa9.56□□□□□ -0.88
NUP54-202ENST00000502850 MGST1P10620 155 aaKnown RBP9.56□□□□□ -0.88
NUP54-202ENST00000502850 ORM2P19652 201 aa9.56□□□□□ -0.88
NUP54-202ENST00000502850 CNTFRP26992 372 aa9.56□□□□□ -0.88
NUP54-202ENST00000502850 CX3CL1P78423 397 aa9.56□□□□□ -0.88
NUP54-202ENST00000502850 MMDQ15546 238 aa9.56□□□□□ -0.88
NUP54-202ENST00000502850 RASL11AQ6T310 242 aa9.56□□□□□ -0.88
NUP54-202ENST00000502850 GBGT1Q8N5D6 347 aa9.56□□□□□ -0.88
NUP54-202ENST00000502850 NPBQ8NG41 125 aa9.56□□□□□ -0.88
NUP54-202ENST00000502850 RBM14Q96PK6 669 aaKnown RBP9.56□□□□□ -0.88
NUP54-202ENST00000502850 MRPL18Q9H0U6 180 aaKnown RBP9.56□□□□□ -0.88
NUP54-202ENST00000502850 FBXL15Q9H469 300 aa9.56□□□□□ -0.88
NUP54-202ENST00000502850 MRPL36Q9P0J6 103 aaKnown RBP9.56□□□□□ -0.88
NUP54-202ENST00000502850 RNF24Q9Y225 148 aa9.56□□□□□ -0.88
NUP54-202ENST00000502850 HIGD1AQ9Y241 93 aa9.56□□□□□ -0.88
NUP54-202ENST00000502850 MALRD1Q5VYJ5 2156 aa9.56□□□□□ -0.88
NUP54-202ENST00000502850 NAV3Q8IVL0 2385 aa9.56□□□□□ -0.88
NUP54-202ENST00000502850 TIMM23O14925 209 aa9.56□□□□□ -0.88
NUP54-202ENST00000502850 NDUFA3O95167 84 aa9.56□□□□□ -0.88
NUP54-202ENST00000502850 RNF224P0DH78 156 aa9.56□□□□□ -0.88
NUP54-202ENST00000502850 PYYP10082 97 aa9.56□□□□□ -0.88
NUP54-202ENST00000502850 MFAP2P55001 183 aa9.56□□□□□ -0.88
NUP54-202ENST00000502850 PKIAP61925 76 aa9.56□□□□□ -0.88
NUP54-202ENST00000502850 UBE2G1P62253 170 aa9.56□□□□□ -0.88
NUP54-202ENST00000502850 TMEM183BQ1AE95 376 aa9.56□□□□□ -0.88
NUP54-202ENST00000502850 MORN5Q5VZ52 161 aa9.56□□□□□ -0.88
NUP54-202ENST00000502850 RASL11BQ9BPW5 248 aa9.56□□□□□ -0.88
NUP54-202ENST00000502850 MAST4O15021 2626 aa9.55□□□□□ -0.88
NUP54-202ENST00000502850 SMIM27A0A1W2PRY6 76 aa9.55□□□□□ -0.88
NUP54-202ENST00000502850 SCGB2A1O75556 95 aa9.55□□□□□ -0.88
NUP54-202ENST00000502850 IGLV2-8P01709 118 aa9.55□□□□□ -0.88
NUP54-202ENST00000502850 HLA-DQA1P01909 254 aa9.55□□□□□ -0.88
NUP54-202ENST00000502850 HIST1H1EP10412 219 aaKnown RBP9.55□□□□□ -0.88
NUP54-202ENST00000502850 ADMP35318 185 aa9.55□□□□□ -0.88
NUP54-202ENST00000502850 MYCNOSP40205 109 aa9.55□□□□□ -0.88
NUP54-202ENST00000502850 RANP62826 216 aaKnown RBP9.55□□□□□ -0.88
NUP54-202ENST00000502850 OR5I1Q13606 314 aa9.55□□□□□ -0.88
NUP54-202ENST00000502850 IQCJQ1A5X6 159 aa9.55□□□□□ -0.88
NUP54-202ENST00000502850 MINOS1Q5TGZ0 78 aa9.55□□□□□ -0.88
NUP54-202ENST00000502850 HIST2H2BCQ6DN03 193 aa9.55□□□□□ -0.88
NUP54-202ENST00000502850 OR8I2Q8N0Y5 310 aa9.55□□□□□ -0.88
NUP54-202ENST00000502850 C5orf17Q8NAS9 161 aa9.55□□□□□ -0.88
NUP54-202ENST00000502850 TMEM14CQ9P0S9 112 aa9.55□□□□□ -0.88
NUP54-202ENST00000502850 MINOS1-NBL1R4GNA1 71 aa9.55□□□□□ -0.88
NUP54-202ENST00000502850 TRAV30A0A087WSZ9 112 aa9.54□□□□□ -0.88
NUP54-202ENST00000502850 A1L4Q6 167 aa9.54□□□□□ -0.88
NUP54-202ENST00000502850 ZNF705GA8MUZ8 300 aaPredicted RBP9.54□□□□□ -0.88
NUP54-202ENST00000502850 SNURFLB1AK76 121 aa9.54□□□□□ -0.88
NUP54-202ENST00000502850 I3L2K1 104 aa9.54□□□□□ -0.88
NUP54-202ENST00000502850 FCN1O00602 326 aa9.54□□□□□ -0.88
NUP54-202ENST00000502850 IGHV3-48P01763 117 aa9.54□□□□□ -0.88
NUP54-202ENST00000502850 AMY1AP04745 511 aa9.54□□□□□ -0.88
NUP54-202ENST00000502850 NBEAP1P0C6P0 100 aa9.54□□□□□ -0.88
NUP54-202ENST00000502850 IGLC1P0CG04 106 aa9.54□□□□□ -0.88
NUP54-202ENST00000502850 CBLN1P23435 193 aa9.54□□□□□ -0.88
NUP54-202ENST00000502850 ARF6P62330 175 aa9.54□□□□□ -0.88
NUP54-202ENST00000502850 PAFAH1B2P68402 229 aa9.54□□□□□ -0.88
NUP54-202ENST00000502850 BAGE2Q86Y30 109 aa9.54□□□□□ -0.88
NUP54-202ENST00000502850 CMTM2Q8TAZ6 248 aa9.54□□□□□ -0.88
NUP54-202ENST00000502850 CFHR4Q92496 578 aa9.54□□□□□ -0.88
NUP54-202ENST00000502850 FMC1Q96HJ9 113 aa9.54□□□□□ -0.88
NUP54-202ENST00000502850 ATG101Q9BSB4 218 aa9.54□□□□□ -0.88
NUP54-202ENST00000502850 RNASE7Q9H1E1 156 aaKnown RBP9.54□□□□□ -0.88
NUP54-202ENST00000502850 PRDM13Q9H4Q3 707 aa9.54□□□□□ -0.88
NUP54-202ENST00000502850 EPDR1Q9UM22 224 aa9.54□□□□□ -0.88
NUP54-202ENST00000502850 UTP20O75691 2785 aaKnown RBP9.54□□□□□ -0.88
NUP54-202ENST00000502850 IZUMO1RA6ND01 250 aa9.53□□□□□ -0.88
NUP54-202ENST00000502850 GATCO43716 136 aaKnown RBP9.53□□□□□ -0.88
NUP54-202ENST00000502850 SLC25A5P05141 298 aaKnown RBP9.53□□□□□ -0.88
NUP54-202ENST00000502850 ESDP10768 282 aa9.53□□□□□ -0.88
NUP54-202ENST00000502850 GP9P14770 177 aa9.53□□□□□ -0.88
NUP54-202ENST00000502850 CRISP2P16562 243 aa9.53□□□□□ -0.88
NUP54-202ENST00000502850 IER3P46695 156 aa9.53□□□□□ -0.88
NUP54-202ENST00000502850 Q0VG73 95 aa9.53□□□□□ -0.88
NUP54-202ENST00000502850 GRAMD2BQ96HH9 432 aa9.53□□□□□ -0.88
NUP54-202ENST00000502850 TMEM68Q96MH6 324 aa9.53□□□□□ -0.88
NUP54-202ENST00000502850 WNT10AQ9GZT5 417 aa9.53□□□□□ -0.88
NUP54-202ENST00000502850 SERTAD4Q9NUC0 356 aa9.53□□□□□ -0.88
NUP54-202ENST00000502850 KLF12Q9Y4X4 402 aa9.53□□□□□ -0.88
NUP54-202ENST00000502850 GZMBP10144 247 aa9.53□□□□□ -0.88
NUP54-202ENST00000502850 TPPP2P59282 170 aa9.53□□□□□ -0.88
NUP54-202ENST00000502850 CDSNQ15517 529 aa9.53□□□□□ -0.88
NUP54-202ENST00000502850 USF2Q15853 346 aaPredicted RBP9.53□□□□□ -0.88
NUP54-202ENST00000502850 WIPF2Q8TF74 440 aaPredicted RBP9.53□□□□□ -0.88
NUP54-202ENST00000502850 ZNF48Q96MX3 618 aaPredicted RBP9.53□□□□□ -0.88
NUP54-202ENST00000502850 OTORQ9NRC9 128 aa9.53□□□□□ -0.88
NUP54-202ENST00000502850 PGPA6NDG6 321 aa9.52□□□□□ -0.89
NUP54-202ENST00000502850 NPIPB5A8MRT5 1133 aa9.52□□□□□ -0.89
NUP54-202ENST00000502850 RD3LP0DJH9 198 aa9.52□□□□□ -0.89
NUP54-202ENST00000502850 PSG1P11464 419 aa9.52□□□□□ -0.89
NUP54-202ENST00000502850 S100A7P31151 101 aa9.52□□□□□ -0.89
NUP54-202ENST00000502850 DLX1P56177 255 aa9.52□□□□□ -0.89
NUP54-202ENST00000502850 LYZP61626 148 aa9.52□□□□□ -0.89
NUP54-202ENST00000502850 FXYD3Q14802 87 aa9.52□□□□□ -0.89
NUP54-202ENST00000502850 C5orf64Q2M2E5 130 aa9.52□□□□□ -0.89
NUP54-202ENST00000502850 CT83Q5H943 113 aa9.52□□□□□ -0.89
NUP54-202ENST00000502850 OR10J3Q5JRS4 329 aa9.52□□□□□ -0.89
NUP54-202ENST00000502850 NOL4LQ96MY1 436 aaPredicted RBP9.52□□□□□ -0.89
NUP54-202ENST00000502850 GPR82Q96P67 336 aa9.52□□□□□ -0.89
NUP54-202ENST00000502850 ZNF331Q9NQX6 463 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms