RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 GOLT1BQ9Y3E0 138 aa10.37□□□□□ -0.75
TRAF4-212ENST00000498540 TMED3Q9Y3Q3 217 aa10.37□□□□□ -0.75
TRAF4-212ENST00000498540 F6UB75 175 aa10.36□□□□□ -0.75
TRAF4-212ENST00000498540 SOCS3O14543 225 aa10.36□□□□□ -0.75
TRAF4-212ENST00000498540 HBE1P02100 147 aa10.36□□□□□ -0.75
TRAF4-212ENST00000498540 CD3DP04234 171 aa10.36□□□□□ -0.75
TRAF4-212ENST00000498540 ELK1P19419 428 aa10.36□□□□□ -0.75
TRAF4-212ENST00000498540 RORCP51449 518 aa10.36□□□□□ -0.75
TRAF4-212ENST00000498540 FAM3BP58499 235 aaPredicted RBP10.36□□□□□ -0.75
TRAF4-212ENST00000498540 ZNF79Q15937 498 aa10.36□□□□□ -0.75
TRAF4-212ENST00000498540 ARRDC1Q8N5I2 433 aa10.36□□□□□ -0.75
TRAF4-212ENST00000498540 CCDC71LQ8N9Z2 235 aa10.36□□□□□ -0.75
TRAF4-212ENST00000498540 OR4D10Q8NGI6 311 aa10.36□□□□□ -0.75
TRAF4-212ENST00000498540 OR13C8Q8NGS7 320 aa10.36□□□□□ -0.75
TRAF4-212ENST00000498540 YIPF6Q96EC8 236 aa10.36□□□□□ -0.75
TRAF4-212ENST00000498540 RNF125Q96EQ8 232 aa10.36□□□□□ -0.75
TRAF4-212ENST00000498540 C7orf50Q9BRJ6 194 aaKnown RBP10.36□□□□□ -0.75
TRAF4-212ENST00000498540 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.36□□□□□ -0.75
TRAF4-212ENST00000498540 CACNG5Q9UF02 275 aa10.36□□□□□ -0.75
TRAF4-212ENST00000498540 NBDYA0A0U1RRE5 68 aa10.35□□□□□ -0.75
TRAF4-212ENST00000498540 CEBPZOSA8MTT3 80 aa10.35□□□□□ -0.75
TRAF4-212ENST00000498540 HPGDSO60760 199 aa10.35□□□□□ -0.75
TRAF4-212ENST00000498540 OR5AC1P0C628 307 aa10.35□□□□□ -0.75
TRAF4-212ENST00000498540 PSMB3P49720 205 aa10.35□□□□□ -0.75
TRAF4-212ENST00000498540 PSG9Q00887 426 aa10.35□□□□□ -0.75
TRAF4-212ENST00000498540 RRN3P1Q2M238 152 aa10.35□□□□□ -0.75
TRAF4-212ENST00000498540 FAM78BQ5VT40 261 aa10.35□□□□□ -0.75
TRAF4-212ENST00000498540 ETFRF1Q6IPR1 90 aa10.35□□□□□ -0.75
TRAF4-212ENST00000498540 FAM219AQ8IW50 185 aa10.35□□□□□ -0.75
TRAF4-212ENST00000498540 Q8N1X5 172 aa10.35□□□□□ -0.75
TRAF4-212ENST00000498540 C6orf223Q8N319 242 aa10.35□□□□□ -0.75
TRAF4-212ENST00000498540 C15orf53Q8NAA6 179 aa10.35□□□□□ -0.75
TRAF4-212ENST00000498540 COQ8AQ8NI60 647 aa10.35□□□□□ -0.75
TRAF4-212ENST00000498540 GPR146Q96CH1 333 aa10.35□□□□□ -0.75
TRAF4-212ENST00000498540 PBDC1Q9BVG4 233 aa10.35□□□□□ -0.75
TRAF4-212ENST00000498540 TMEM222Q9H0R3 208 aa10.35□□□□□ -0.75
TRAF4-212ENST00000498540 CDS2O95674 445 aa10.34□□□□□ -0.75
TRAF4-212ENST00000498540 ID1P41134 155 aa10.34□□□□□ -0.75
TRAF4-212ENST00000498540 MEF2DQ14814 521 aa10.34□□□□□ -0.75
TRAF4-212ENST00000498540 ZNRF2Q8NHG8 242 aa10.34□□□□□ -0.75
TRAF4-212ENST00000498540 ZFAND1Q8TCF1 268 aa10.34□□□□□ -0.75
TRAF4-212ENST00000498540 MARCH1Q8TCQ1 289 aa10.34□□□□□ -0.75
TRAF4-212ENST00000498540 GLYATL2Q8WU03 294 aa10.34□□□□□ -0.75
TRAF4-212ENST00000498540 ATG101Q9BSB4 218 aa10.34□□□□□ -0.75
TRAF4-212ENST00000498540 PRM2P04554 102 aa10.33□□□□□ -0.76
TRAF4-212ENST00000498540 NUP62P37198 522 aaPredicted RBP10.33□□□□□ -0.76
TRAF4-212ENST00000498540 PAX9P55771 341 aa10.33□□□□□ -0.76
TRAF4-212ENST00000498540 SCGB2B2Q4G0G5 96 aa10.33□□□□□ -0.76
TRAF4-212ENST00000498540 NMSQ5H8A3 153 aa10.33□□□□□ -0.76
TRAF4-212ENST00000498540 OR8G2PQ6IF36 304 aa10.33□□□□□ -0.76
TRAF4-212ENST00000498540 SELENOHQ8IZQ5 122 aaKnown RBP10.33□□□□□ -0.76
TRAF4-212ENST00000498540 OR52I2Q8NH67 350 aa10.33□□□□□ -0.76
TRAF4-212ENST00000498540 TERB2Q8NHR7 220 aa10.33□□□□□ -0.76
TRAF4-212ENST00000498540 RBPMSQ93062 196 aaKnown RBP10.33□□□□□ -0.76
TRAF4-212ENST00000498540 A0A0J9YX75 114 aa10.32□□□□□ -0.76
TRAF4-212ENST00000498540 B3GALNT1O75752 331 aa10.32□□□□□ -0.76
TRAF4-212ENST00000498540 ATP6V1G2O95670 118 aa10.32□□□□□ -0.76
TRAF4-212ENST00000498540 NCS1P62166 190 aa10.32□□□□□ -0.76
TRAF4-212ENST00000498540 ZNF90Q03938 601 aa10.32□□□□□ -0.76
TRAF4-212ENST00000498540 SPATA31B1PQ5VZV4 182 aa10.32□□□□□ -0.76
TRAF4-212ENST00000498540 EBLN2Q6P2I7 272 aa10.32□□□□□ -0.76
TRAF4-212ENST00000498540 C20orf173Q96LM9 149 aa10.32□□□□□ -0.76
TRAF4-212ENST00000498540 MAGT1Q9H0U3 335 aa10.32□□□□□ -0.76
TRAF4-212ENST00000498540 SCRT2Q9NQ03 307 aa10.32□□□□□ -0.76
TRAF4-212ENST00000498540 APOBP04114 4563 aaKnown RBP10.32□□□□□ -0.76
TRAF4-212ENST00000498540 IGKV1D-37A0A075B6S9 117 aa10.31□□□□□ -0.76
TRAF4-212ENST00000498540 TEX13DA0A0J9YY54 714 aaPredicted RBP10.31□□□□□ -0.76
TRAF4-212ENST00000498540 ISLRO14498 428 aa10.31□□□□□ -0.76
TRAF4-212ENST00000498540 TBPP20226 339 aa10.31□□□□□ -0.76
TRAF4-212ENST00000498540 ALDH3B2P48448 385 aa10.31□□□□□ -0.76
TRAF4-212ENST00000498540 LYZP61626 148 aa10.31□□□□□ -0.76
TRAF4-212ENST00000498540 SUPT4H1P63272 117 aaKnown RBP10.31□□□□□ -0.76
TRAF4-212ENST00000498540 TMEM268Q5VZI3 342 aa10.31□□□□□ -0.76
TRAF4-212ENST00000498540 AMTNQ6UX39 209 aa10.31□□□□□ -0.76
TRAF4-212ENST00000498540 ABHD1Q96SE0 405 aa10.31□□□□□ -0.76
TRAF4-212ENST00000498540 RTBDNQ9BSG5 229 aaPredicted RBP10.31□□□□□ -0.76
TRAF4-212ENST00000498540 TMEM208Q9BTX3 173 aa10.31□□□□□ -0.76
TRAF4-212ENST00000498540 NAA60Q9H7X0 242 aa10.31□□□□□ -0.76
TRAF4-212ENST00000498540 MTFP1Q9UDX5 166 aa10.31□□□□□ -0.76
TRAF4-212ENST00000498540 ZFP92A6NM28 416 aa10.3□□□□□ -0.76
TRAF4-212ENST00000498540 A8MTW9 85 aa10.3□□□□□ -0.76
TRAF4-212ENST00000498540 ZNF705GA8MUZ8 300 aaPredicted RBP10.3□□□□□ -0.76
TRAF4-212ENST00000498540 FAM25AB3EWG3 89 aa10.3□□□□□ -0.76
TRAF4-212ENST00000498540 FAM25CB3EWG5 89 aa10.3□□□□□ -0.76
TRAF4-212ENST00000498540 FAM25GB3EWG6 89 aa10.3□□□□□ -0.76
TRAF4-212ENST00000498540 NUDT3O95989 172 aa10.3□□□□□ -0.76
TRAF4-212ENST00000498540 KLF9Q13886 244 aaPredicted RBP10.3□□□□□ -0.76
TRAF4-212ENST00000498540 C1orf194Q5T5A4 169 aa10.3□□□□□ -0.76
TRAF4-212ENST00000498540 FAAP20Q6NZ36 180 aa10.3□□□□□ -0.76
TRAF4-212ENST00000498540 SPATA12Q7Z6I5 190 aa10.3□□□□□ -0.76
TRAF4-212ENST00000498540 IGF2BP2-AS1Q96M15 143 aa10.3□□□□□ -0.76
TRAF4-212ENST00000498540 DOK5Q9P104 306 aa10.3□□□□□ -0.76
TRAF4-212ENST00000498540 PFDN2Q9UHV9 154 aa10.3□□□□□ -0.76
TRAF4-212ENST00000498540 TNFAIP8O95379 198 aa10.29□□□□□ -0.76
TRAF4-212ENST00000498540 RAB3DO95716 219 aa10.29□□□□□ -0.76
TRAF4-212ENST00000498540 DEFB130BP0DP73 79 aa10.29□□□□□ -0.76
TRAF4-212ENST00000498540 DEFB130AP0DP74 79 aa10.29□□□□□ -0.76
TRAF4-212ENST00000498540 VBP1P61758 197 aa10.29□□□□□ -0.76
TRAF4-212ENST00000498540 NOXA1Q86UR1 476 aa10.29□□□□□ -0.76
TRAF4-212ENST00000498540 RPRMQ9NS64 109 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms