RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 MUC7Q8TAX7 377 aa11.49□□□□□ -0.57
NUP50-219ENST00000497960 CITED4Q96RK1 184 aa11.49□□□□□ -0.57
NUP50-219ENST00000497960 SPAG8Q99932 426 aaPredicted RBP11.49□□□□□ -0.57
NUP50-219ENST00000497960 WFDC10AQ9H1F0 79 aa11.49□□□□□ -0.57
NUP50-219ENST00000497960 MBD2Q9UBB5 411 aa11.49□□□□□ -0.57
NUP50-219ENST00000497960 H0YIZ8 118 aa11.48□□□□□ -0.57
NUP50-219ENST00000497960 OR10J1P30954 320 aa11.48□□□□□ -0.57
NUP50-219ENST00000497960 P2RY1P47900 373 aa11.48□□□□□ -0.57
NUP50-219ENST00000497960 RAP2BP61225 183 aa11.48□□□□□ -0.57
NUP50-219ENST00000497960 LINC00322Q6ZN03 302 aaPredicted RBP11.48□□□□□ -0.57
NUP50-219ENST00000497960 Q6ZNX1 250 aa11.48□□□□□ -0.57
NUP50-219ENST00000497960 LILRB2Q8N423 598 aa11.48□□□□□ -0.57
NUP50-219ENST00000497960 TMEM116Q8NCL8 245 aa11.48□□□□□ -0.57
NUP50-219ENST00000497960 OR1S2Q8NGQ3 325 aa11.48□□□□□ -0.57
NUP50-219ENST00000497960 THAP6Q8TBB0 222 aa11.48□□□□□ -0.57
NUP50-219ENST00000497960 NPIPB3Q92617 1050 aa11.48□□□□□ -0.57
NUP50-219ENST00000497960 hCG_2014768A0A024R1R8 64 aa11.47□□□□□ -0.57
NUP50-219ENST00000497960 TRAV30A0A087WSZ9 112 aa11.47□□□□□ -0.57
NUP50-219ENST00000497960 IGSF23A1L1A6 192 aa11.47□□□□□ -0.57
NUP50-219ENST00000497960 RBMY1BA6NDE4 496 aaKnown RBP11.47□□□□□ -0.57
NUP50-219ENST00000497960 RBMY1EA6NEQ0 496 aaKnown RBP11.47□□□□□ -0.57
NUP50-219ENST00000497960 ZFP92A6NM28 416 aa11.47□□□□□ -0.57
NUP50-219ENST00000497960 PMS2P5A8MQ11 134 aa11.47□□□□□ -0.57
NUP50-219ENST00000497960 TSPAN4O14817 238 aa11.47□□□□□ -0.57
NUP50-219ENST00000497960 CST7O76096 145 aa11.47□□□□□ -0.57
NUP50-219ENST00000497960 RBMY1DP0C7P1 496 aaKnown RBP11.47□□□□□ -0.57
NUP50-219ENST00000497960 SULT1A1P50225 295 aa11.47□□□□□ -0.57
NUP50-219ENST00000497960 DLK1P80370 383 aa11.47□□□□□ -0.57
NUP50-219ENST00000497960 FGL1Q08830 312 aa11.47□□□□□ -0.57
NUP50-219ENST00000497960 SLC38A11Q08AI6 406 aa11.47□□□□□ -0.57
NUP50-219ENST00000497960 GAMTQ14353 236 aa11.47□□□□□ -0.57
NUP50-219ENST00000497960 TMEM252Q8N6L7 170 aa11.47□□□□□ -0.57
NUP50-219ENST00000497960 TMEM217Q8N7C4 229 aa11.47□□□□□ -0.57
NUP50-219ENST00000497960 GINS3Q9BRX5 216 aa11.47□□□□□ -0.57
NUP50-219ENST00000497960 SLC25A31Q9H0C2 315 aa11.47□□□□□ -0.57
NUP50-219ENST00000497960 SMPXQ9UHP9 88 aa11.47□□□□□ -0.57
NUP50-219ENST00000497960 HUWE1Q7Z6Z7 4374 aaKnown RBP11.46□□□□□ -0.57
NUP50-219ENST00000497960 TRAV14DV4A0A0A6YYC5 116 aa11.46□□□□□ -0.57
NUP50-219ENST00000497960 IGHV7-4-1A0A0J9YVY3 117 aa11.46□□□□□ -0.57
NUP50-219ENST00000497960 IGLC1P0CG04 106 aa11.46□□□□□ -0.57
NUP50-219ENST00000497960 BMI1P35226 326 aa11.46□□□□□ -0.57
NUP50-219ENST00000497960 HBG1P69891 147 aa11.46□□□□□ -0.57
NUP50-219ENST00000497960 HBG2P69892 147 aa11.46□□□□□ -0.57
NUP50-219ENST00000497960 TIGITQ495A1 244 aa11.46□□□□□ -0.57
NUP50-219ENST00000497960 ZNF600Q6ZNG1 722 aa11.46□□□□□ -0.57
NUP50-219ENST00000497960 RHPN1-AS1Q9BWJ2 59 aa11.46□□□□□ -0.57
NUP50-219ENST00000497960 OR4C46A6NHA9 309 aa11.45□□□□□ -0.58
NUP50-219ENST00000497960 EWSR1Q01844 656 aaKnown RBP eCLIP11.45□□□□□ -0.58
NUP50-219ENST00000497960 ARL16Q0P5N6 197 aa11.45□□□□□ -0.58
NUP50-219ENST00000497960 OR2T35Q8NGX2 323 aa11.45□□□□□ -0.58
NUP50-219ENST00000497960 LOC102724200A0A096LPH7 203 aaPredicted RBP11.44□□□□□ -0.58
NUP50-219ENST00000497960 FNDC10F2Z333 226 aa11.44□□□□□ -0.58
NUP50-219ENST00000497960 CHEK1O14757 476 aa11.44□□□□□ -0.58
NUP50-219ENST00000497960 LYL1P12980 280 aa11.44□□□□□ -0.58
NUP50-219ENST00000497960 BAXQ07812 192 aa11.44□□□□□ -0.58
NUP50-219ENST00000497960 TOMM20LQ6UXN7 152 aa11.44□□□□□ -0.58
NUP50-219ENST00000497960 CHAC2Q8WUX2 184 aa11.44□□□□□ -0.58
NUP50-219ENST00000497960 ZNF414Q96IQ9 312 aa11.44□□□□□ -0.58
NUP50-219ENST00000497960 RNF2Q99496 336 aa11.44□□□□□ -0.58
NUP50-219ENST00000497960 RNF126Q9BV68 326 aa11.44□□□□□ -0.58
NUP50-219ENST00000497960 GGACTQ9BVM4 153 aa11.44□□□□□ -0.58
NUP50-219ENST00000497960 GGTLC1Q9BX51 225 aa11.44□□□□□ -0.58
NUP50-219ENST00000497960 RETNQ9HD89 108 aa11.44□□□□□ -0.58
NUP50-219ENST00000497960 PUS1Q9Y606 427 aaKnown RBP eCLIP11.44□□□□□ -0.58
NUP50-219ENST00000497960 FXYD6-FXYD2A0A087WZ82 144 aa11.43□□□□□ -0.58
NUP50-219ENST00000497960 IGHV3-49A0A0A0MS15 119 aa11.43□□□□□ -0.58
NUP50-219ENST00000497960 UBE2L5PA0A1B0GUS4 154 aa11.43□□□□□ -0.58
NUP50-219ENST00000497960 IGKV1-17P01599 117 aa11.43□□□□□ -0.58
NUP50-219ENST00000497960 FABP1P07148 127 aa11.43□□□□□ -0.58
NUP50-219ENST00000497960 RPL12P30050 165 aaKnown RBP11.43□□□□□ -0.58
NUP50-219ENST00000497960 S100A11P31949 105 aa11.43□□□□□ -0.58
NUP50-219ENST00000497960 THAP8Q8NA92 274 aa11.43□□□□□ -0.58
NUP50-219ENST00000497960 TMEM147Q9BVK8 224 aa11.43□□□□□ -0.58
NUP50-219ENST00000497960 EDA2RQ9HAV5 297 aa11.43□□□□□ -0.58
NUP50-219ENST00000497960 UBQLN2Q9UHD9 624 aa11.43□□□□□ -0.58
NUP50-219ENST00000497960 IGHV3OR16-13A0A075B7E8 117 aa11.42□□□□□ -0.58
NUP50-219ENST00000497960 IGHV3-74A0A0B4J1X5 117 aa11.42□□□□□ -0.58
NUP50-219ENST00000497960 TOMM40O96008 361 aa11.42□□□□□ -0.58
NUP50-219ENST00000497960 CD5P06127 495 aa11.42□□□□□ -0.58
NUP50-219ENST00000497960 NUP62P37198 522 aaPredicted RBP11.42□□□□□ -0.58
NUP50-219ENST00000497960 YPEL3P61236 119 aaPredicted RBP11.42□□□□□ -0.58
NUP50-219ENST00000497960 CLINT1Q14677 625 aa11.42□□□□□ -0.58
NUP50-219ENST00000497960 CASC10Q5T4H9 136 aa11.42□□□□□ -0.58
NUP50-219ENST00000497960 TMEM144Q7Z5S9 345 aa11.42□□□□□ -0.58
NUP50-219ENST00000497960 OR5C1Q8NGR4 320 aa11.42□□□□□ -0.58
NUP50-219ENST00000497960 Q8WTZ3 238 aa11.42□□□□□ -0.58
NUP50-219ENST00000497960 TRGV9Q99603 122 aa11.42□□□□□ -0.58
NUP50-219ENST00000497960 FAM110AQ9BQ89 295 aa11.42□□□□□ -0.58
NUP50-219ENST00000497960 NPVFQ9HCQ7 196 aa11.42□□□□□ -0.58
NUP50-219ENST00000497960 UQCC1Q9NVA1 299 aa11.42□□□□□ -0.58
NUP50-219ENST00000497960 HSPB11Q9Y547 144 aa11.42□□□□□ -0.58
NUP50-219ENST00000497960 IGKV1D-37A0A075B6S9 117 aa11.41□□□□□ -0.58
NUP50-219ENST00000497960 IGKV1OR2-108A0A075B7D4 117 aa11.41□□□□□ -0.58
NUP50-219ENST00000497960 IL4P05112 153 aa11.41□□□□□ -0.58
NUP50-219ENST00000497960 CMC4P56277 68 aaPredicted RBP11.41□□□□□ -0.58
NUP50-219ENST00000497960 PAFAH1B2P68402 229 aa11.41□□□□□ -0.58
NUP50-219ENST00000497960 NHLH2Q02577 135 aa11.41□□□□□ -0.58
NUP50-219ENST00000497960 ZNF90Q03938 601 aa11.41□□□□□ -0.58
NUP50-219ENST00000497960 ATP6V1FQ16864 119 aa11.41□□□□□ -0.58
NUP50-219ENST00000497960 Q5BKY6 102 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms