RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 NPY1RP25929 384 aa12.19□□□□□ -0.46
TRAPPC3-207ENST00000497251 SRPXP78539 464 aa12.19□□□□□ -0.46
TRAPPC3-207ENST00000497251 DHRS2Q13268 280 aa12.19□□□□□ -0.46
TRAPPC3-207ENST00000497251 C2orf83Q53S99 150 aa12.19□□□□□ -0.46
TRAPPC3-207ENST00000497251 ACTL10Q5JWF8 245 aa12.19□□□□□ -0.46
TRAPPC3-207ENST00000497251 Q6ZRM9 215 aa12.19□□□□□ -0.46
TRAPPC3-207ENST00000497251 RAB40CQ96S21 281 aa12.19□□□□□ -0.46
TRAPPC3-207ENST00000497251 SLC25A21Q9BQT8 299 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC3-207ENST00000497251 SRRQ9GZT4 340 aa12.19□□□□□ -0.46
TRAPPC3-207ENST00000497251 PFDN2Q9UHV9 154 aa12.19□□□□□ -0.46
TRAPPC3-207ENST00000497251 X6R8D5 127 aa12.19□□□□□ -0.46
TRAPPC3-207ENST00000497251 AMBPP02760 352 aa12.18□□□□□ -0.46
TRAPPC3-207ENST00000497251 AKR1C4P17516 323 aa12.18□□□□□ -0.46
TRAPPC3-207ENST00000497251 NUP62P37198 522 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC3-207ENST00000497251 SUPT4H1P63272 117 aaKnown RBP12.18□□□□□ -0.46
TRAPPC3-207ENST00000497251 C16orf54Q6UWD8 224 aa12.18□□□□□ -0.46
TRAPPC3-207ENST00000497251 CACNG5Q9UF02 275 aa12.18□□□□□ -0.46
TRAPPC3-207ENST00000497251 A0A0B4J2A0 478 aa12.17□□□□□ -0.46
TRAPPC3-207ENST00000497251 TMEM189A5PLL7 270 aa12.17□□□□□ -0.46
TRAPPC3-207ENST00000497251 IGLC1P0CG04 106 aa12.17□□□□□ -0.46
TRAPPC3-207ENST00000497251 TMEM128Q5BJH2 165 aa12.17□□□□□ -0.46
TRAPPC3-207ENST00000497251 Q6ZTC4 211 aa12.17□□□□□ -0.46
TRAPPC3-207ENST00000497251 GLMPQ8WWB7 406 aa12.17□□□□□ -0.46
TRAPPC3-207ENST00000497251 GPR146Q96CH1 333 aa12.17□□□□□ -0.46
TRAPPC3-207ENST00000497251 FAM210BQ96KR6 192 aa12.17□□□□□ -0.46
TRAPPC3-207ENST00000497251 HEYLQ9NQ87 328 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC3-207ENST00000497251 SHPKQ9UHJ6 478 aa12.17□□□□□ -0.46
TRAPPC3-207ENST00000497251 ELOA3CA0A087WX78 387 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC3-207ENST00000497251 SMIM9A6NGZ8 99 aa12.16□□□□□ -0.46
TRAPPC3-207ENST00000497251 KNCNA6PVL3 124 aa12.16□□□□□ -0.46
TRAPPC3-207ENST00000497251 SULT1A3P0DMM9 295 aa12.16□□□□□ -0.46
TRAPPC3-207ENST00000497251 SULT1A4P0DMN0 295 aa12.16□□□□□ -0.46
TRAPPC3-207ENST00000497251 C4BPBP20851 252 aa12.16□□□□□ -0.46
TRAPPC3-207ENST00000497251 OR10J1P30954 320 aa12.16□□□□□ -0.46
TRAPPC3-207ENST00000497251 MLANAQ16655 118 aa12.16□□□□□ -0.46
TRAPPC3-207ENST00000497251 TIGITQ495A1 244 aa12.16□□□□□ -0.46
TRAPPC3-207ENST00000497251 PRSS54Q6PEW0 395 aa12.16□□□□□ -0.46
TRAPPC3-207ENST00000497251 LGI3Q8N145 548 aa12.16□□□□□ -0.46
TRAPPC3-207ENST00000497251 NEU1Q99519 415 aa12.16□□□□□ -0.46
TRAPPC3-207ENST00000497251 NRN1Q9NPD7 142 aa12.16□□□□□ -0.46
TRAPPC3-207ENST00000497251 MRPL36Q9P0J6 103 aaKnown RBP12.16□□□□□ -0.46
TRAPPC3-207ENST00000497251 DEFB131BA0A096LNP1 70 aa12.15□□□□□ -0.46
TRAPPC3-207ENST00000497251 TEX48A0A1B0GUV7 120 aa12.15□□□□□ -0.46
TRAPPC3-207ENST00000497251 DUXBA0A1W2PPF3 345 aa12.15□□□□□ -0.46
TRAPPC3-207ENST00000497251 CCR6P51684 374 aa12.15□□□□□ -0.46
TRAPPC3-207ENST00000497251 ATP5IP56385 69 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC3-207ENST00000497251 NMSQ5H8A3 153 aa12.15□□□□□ -0.46
TRAPPC3-207ENST00000497251 PSMG4Q5JS54 123 aa12.15□□□□□ -0.46
TRAPPC3-207ENST00000497251 TRIQKQ629K1 86 aa12.15□□□□□ -0.46
TRAPPC3-207ENST00000497251 TMED4Q7Z7H5 227 aa12.15□□□□□ -0.46
TRAPPC3-207ENST00000497251 POM121L12Q8N7R1 296 aa12.15□□□□□ -0.46
TRAPPC3-207ENST00000497251 NDUFAF3Q9BU61 184 aa12.15□□□□□ -0.46
TRAPPC3-207ENST00000497251 NAP1L6A6NFF2 107 aa12.14□□□□□ -0.47
TRAPPC3-207ENST00000497251 FAM90A26D6RGX4 464 aa12.14□□□□□ -0.47
TRAPPC3-207ENST00000497251 BUB3O43684 328 aa12.14□□□□□ -0.47
TRAPPC3-207ENST00000497251 RD3LP0DJH9 198 aa12.14□□□□□ -0.47
TRAPPC3-207ENST00000497251 NKX2-1P43699 371 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC3-207ENST00000497251 INPP1P49441 399 aa12.14□□□□□ -0.47
TRAPPC3-207ENST00000497251 RND2P52198 227 aa12.14□□□□□ -0.47
TRAPPC3-207ENST00000497251 SLC24A4Q8NFF2 622 aa12.14□□□□□ -0.47
TRAPPC3-207ENST00000497251 CLUHP3Q96NS8 147 aa12.14□□□□□ -0.47
TRAPPC3-207ENST00000497251 PRR13Q9NZ81 148 aa12.14□□□□□ -0.47
TRAPPC3-207ENST00000497251 CEBPZOSA8MTT3 80 aa12.13□□□□□ -0.47
TRAPPC3-207ENST00000497251 H3BMM0 161 aa12.13□□□□□ -0.47
TRAPPC3-207ENST00000497251 TOMM40O96008 361 aa12.13□□□□□ -0.47
TRAPPC3-207ENST00000497251 SMCO1Q147U7 214 aa12.13□□□□□ -0.47
TRAPPC3-207ENST00000497251 BAK1Q16611 211 aa12.13□□□□□ -0.47
TRAPPC3-207ENST00000497251 C12orf74Q32Q52 190 aa12.13□□□□□ -0.47
TRAPPC3-207ENST00000497251 SPATA31B1PQ5VZV4 182 aa12.13□□□□□ -0.47
TRAPPC3-207ENST00000497251 LYZL2Q7Z4W2 148 aa12.13□□□□□ -0.47
TRAPPC3-207ENST00000497251 LRTM2Q8N967 370 aa12.13□□□□□ -0.47
TRAPPC3-207ENST00000497251 U3KQ87 197 aa12.13□□□□□ -0.47
TRAPPC3-207ENST00000497251 IL4P05112 153 aa12.12□□□□□ -0.47
TRAPPC3-207ENST00000497251 SPART-AS1P0CW21 52 aa12.12□□□□□ -0.47
TRAPPC3-207ENST00000497251 MED14OSP0DP75 135 aa12.12□□□□□ -0.47
TRAPPC3-207ENST00000497251 HLA-DRB4P13762 266 aa12.12□□□□□ -0.47
TRAPPC3-207ENST00000497251 UBE2MP61081 183 aaKnown RBP12.12□□□□□ -0.47
TRAPPC3-207ENST00000497251 SAMD13Q5VXD3 122 aa12.12□□□□□ -0.47
TRAPPC3-207ENST00000497251 OR8G2PQ6IF36 304 aa12.12□□□□□ -0.47
TRAPPC3-207ENST00000497251 SIGLEC15Q6ZMC9 328 aa12.12□□□□□ -0.47
TRAPPC3-207ENST00000497251 SDHCQ99643 169 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC3-207ENST00000497251 C7orf50Q9BRJ6 194 aaKnown RBP12.12□□□□□ -0.47
TRAPPC3-207ENST00000497251 CLEC5AQ9NY25 188 aa12.12□□□□□ -0.47
TRAPPC3-207ENST00000497251 HSPB7Q9UBY9 170 aa12.12□□□□□ -0.47
TRAPPC3-207ENST00000497251 HLA-DRB4X5D2U9 266 aa12.12□□□□□ -0.47
TRAPPC3-207ENST00000497251 SLC25A6P12236 298 aa12.11□□□□□ -0.47
TRAPPC3-207ENST00000497251 VAMP1P23763 118 aa12.11□□□□□ -0.47
TRAPPC3-207ENST00000497251 LGALS9BQ3B8N2 356 aa12.11□□□□□ -0.47
TRAPPC3-207ENST00000497251 ZNF705AQ6ZN79 300 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC3-207ENST00000497251 NPIPB3Q92617 1050 aa12.11□□□□□ -0.47
TRAPPC3-207ENST00000497251 CENPXA8MT69 81 aa12.1□□□□□ -0.47
TRAPPC3-207ENST00000497251 NDUFB6O95139 128 aa12.1□□□□□ -0.47
TRAPPC3-207ENST00000497251 SFT2D2O95562 160 aa12.1□□□□□ -0.47
TRAPPC3-207ENST00000497251 FABP1P07148 127 aa12.1□□□□□ -0.47
TRAPPC3-207ENST00000497251 ID1P41134 155 aa12.1□□□□□ -0.47
TRAPPC3-207ENST00000497251 USF2Q15853 346 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC3-207ENST00000497251 C1orf194Q5T5A4 169 aa12.1□□□□□ -0.47
TRAPPC3-207ENST00000497251 OR51G1Q8NGK1 321 aa12.1□□□□□ -0.47
TRAPPC3-207ENST00000497251 XCL2Q9UBD3 114 aa12.1□□□□□ -0.47
TRAPPC3-207ENST00000497251 TMED3Q9Y3Q3 217 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms