RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 RNASE10Q5GAN6 216 aaKnown RBP1.27□□□□□ -2.21
SMC4-225ENST00000497203 BRMS1LQ5PSV4 323 aa1.27□□□□□ -2.21
SMC4-225ENST00000497203 SFT2D1Q8WV19 159 aa1.27□□□□□ -2.21
SMC4-225ENST00000497203 YPEL2Q96QA6 119 aa1.27□□□□□ -2.21
SMC4-225ENST00000497203 TMEM133Q9H2Q1 129 aa1.27□□□□□ -2.21
SMC4-225ENST00000497203 EML6Q6ZMW3 1958 aa1.27□□□□□ -2.21
SMC4-225ENST00000497203 MYH7BA7E2Y1 1941 aa1.27□□□□□ -2.21
SMC4-225ENST00000497203 OBSL1O75147 1896 aa1.26□□□□□ -2.21
SMC4-225ENST00000497203 COL4A5P29400 1685 aa1.26□□□□□ -2.21
SMC4-225ENST00000497203 A0A087WX48 190 aa1.26□□□□□ -2.21
SMC4-225ENST00000497203 IGKV1-9A0A0C4DH69 117 aa1.26□□□□□ -2.21
SMC4-225ENST00000497203 CLDN25C9JDP6 229 aa1.26□□□□□ -2.21
SMC4-225ENST00000497203 SRIP30626 198 aa1.26□□□□□ -2.21
SMC4-225ENST00000497203 SERPINB9P50453 376 aa1.26□□□□□ -2.21
SMC4-225ENST00000497203 KRR1Q13601 381 aaKnown RBP1.26□□□□□ -2.21
SMC4-225ENST00000497203 ESRGQ1W209 222 aa1.26□□□□□ -2.21
SMC4-225ENST00000497203 RRN3P1Q2M238 152 aa1.26□□□□□ -2.21
SMC4-225ENST00000497203 PXT1Q8NFP0 134 aa1.26□□□□□ -2.21
SMC4-225ENST00000497203 EXPH5Q8NEV8 1989 aa1.26□□□□□ -2.21
SMC4-225ENST00000497203 HELZ2Q9BYK8 2649 aaKnown RBP1.26□□□□□ -2.21
SMC4-225ENST00000497203 TAF1LQ8IZX4 1826 aa1.26□□□□□ -2.21
SMC4-225ENST00000497203 LAMB2P55268 1798 aa1.26□□□□□ -2.21
SMC4-225ENST00000497203 CAMSAP1Q5T5Y3 1602 aa1.26□□□□□ -2.21
SMC4-225ENST00000497203 IGKV2D-26A0A0A0MRZ7 120 aa1.25□□□□□ -2.21
SMC4-225ENST00000497203 TRGV10A0A0A0MS01 117 aa1.25□□□□□ -2.21
SMC4-225ENST00000497203 TRAV12-1A0A0B4J245 112 aa1.25□□□□□ -2.21
SMC4-225ENST00000497203 GEMIN2O14893 280 aaKnown RBP1.25□□□□□ -2.21
SMC4-225ENST00000497203 LYZL6O75951 148 aa1.25□□□□□ -2.21
SMC4-225ENST00000497203 ATP5G3P48201 142 aa1.25□□□□□ -2.21
SMC4-225ENST00000497203 PLCXD2Q0VAA5 305 aa1.25□□□□□ -2.21
SMC4-225ENST00000497203 TAF1AQ15573 450 aaPredicted RBP1.25□□□□□ -2.21
SMC4-225ENST00000497203 C4orf3Q8WVX3 66 aa1.25□□□□□ -2.21
SMC4-225ENST00000497203 MRPL57Q9BQC6 102 aaKnown RBP1.25□□□□□ -2.21
SMC4-225ENST00000497203 PRADC1Q9BSG0 188 aa1.25□□□□□ -2.21
SMC4-225ENST00000497203 C6orf62Q9GZU0 229 aaPredicted RBP1.25□□□□□ -2.21
SMC4-225ENST00000497203 C14orf132Q9NPU4 83 aa1.25□□□□□ -2.21
SMC4-225ENST00000497203 KLK9Q9UKQ9 250 aa1.25□□□□□ -2.21
SMC4-225ENST00000497203 PYCARDQ9ULZ3 195 aa1.25□□□□□ -2.21
SMC4-225ENST00000497203 COL6A6A6NMZ7 2263 aa1.24□□□□□ -2.21
SMC4-225ENST00000497203 RNASE4P34096 147 aaKnown RBP1.24□□□□□ -2.21
SMC4-225ENST00000497203 CTAG1AP78358 180 aa1.24□□□□□ -2.21
SMC4-225ENST00000497203 BCL2L15Q5TBC7 163 aa1.24□□□□□ -2.21
SMC4-225ENST00000497203 DHRS4L2Q6PKH6 230 aa1.24□□□□□ -2.21
SMC4-225ENST00000497203 S100A7AQ86SG5 101 aa1.24□□□□□ -2.21
SMC4-225ENST00000497203 LINC00301Q8NCQ3 95 aa1.24□□□□□ -2.21
SMC4-225ENST00000497203 SLC30A7Q8NEW0 376 aa1.24□□□□□ -2.21
SMC4-225ENST00000497203 SLAMF6Q96DU3 332 aa1.24□□□□□ -2.21
SMC4-225ENST00000497203 LINC00467Q9BRT7 94 aa1.24□□□□□ -2.21
SMC4-225ENST00000497203 BCL2L10Q9HD36 194 aa1.24□□□□□ -2.21
SMC4-225ENST00000497203 RASL12Q9NYN1 266 aa1.24□□□□□ -2.21
SMC4-225ENST00000497203 STOML2Q9UJZ1 356 aa1.24□□□□□ -2.21
SMC4-225ENST00000497203 POLEQ07864 2286 aa1.24□□□□□ -2.21
SMC4-225ENST00000497203 MYH10P35580 1976 aa1.23□□□□□ -2.21
SMC4-225ENST00000497203 RIMBP3CA6NJZ7 1639 aa1.23□□□□□ -2.21
SMC4-225ENST00000497203 RIMBP3BA6NNM3 1639 aa1.23□□□□□ -2.21
SMC4-225ENST00000497203 RIMBP3Q9UFD9 1639 aa1.23□□□□□ -2.21
SMC4-225ENST00000497203 TRAV3A0A0B4J244 114 aa1.23□□□□□ -2.21
SMC4-225ENST00000497203 AIPO00170 330 aa1.23□□□□□ -2.21
SMC4-225ENST00000497203 NDUFC2O95298 119 aa1.23□□□□□ -2.21
SMC4-225ENST00000497203 HACD4Q5VWC8 232 aa1.23□□□□□ -2.21
SMC4-225ENST00000497203 C22orf39Q6P5X5 142 aa1.23□□□□□ -2.21
SMC4-225ENST00000497203 ACER3Q9NUN7 267 aa1.23□□□□□ -2.21
SMC4-225ENST00000497203 FBN3Q75N90 2809 aa1.23□□□□□ -2.21
SMC4-225ENST00000497203 ARHGEF28Q8N1W1 1705 aaKnown RBP1.23□□□□□ -2.21
SMC4-225ENST00000497203 TECTAO75443 2155 aa1.23□□□□□ -2.21
SMC4-225ENST00000497203 SCN3AQ9NY46 2000 aa1.22□□□□□ -2.21
SMC4-225ENST00000497203 GGCTO75223 188 aaKnown RBP1.22□□□□□ -2.21
SMC4-225ENST00000497203 ATG12O94817 140 aa1.22□□□□□ -2.21
SMC4-225ENST00000497203 C1QBP02746 253 aa1.22□□□□□ -2.21
SMC4-225ENST00000497203 ZNF93P35789 620 aaPredicted RBP1.22□□□□□ -2.21
SMC4-225ENST00000497203 DYNLT1P63172 113 aa1.22□□□□□ -2.21
SMC4-225ENST00000497203 C3orf56Q8N813 242 aa1.22□□□□□ -2.21
SMC4-225ENST00000497203 STAG3L4Q8TBR4 150 aa1.22□□□□□ -2.21
SMC4-225ENST00000497203 CANT1Q8WVQ1 401 aa1.22□□□□□ -2.21
SMC4-225ENST00000497203 DLG5Q8TDM6 1919 aa1.21□□□□□ -2.22
SMC4-225ENST00000497203 CEP192Q8TEP8 1941 aa1.21□□□□□ -2.22
SMC4-225ENST00000497203 LOC110117498A0A087WWA1 95 aa1.21□□□□□ -2.22
SMC4-225ENST00000497203 TAX1BP3O14907 124 aa1.21□□□□□ -2.22
SMC4-225ENST00000497203 NDUFB3O43676 98 aa1.21□□□□□ -2.22
SMC4-225ENST00000497203 NCALDP61601 193 aa1.21□□□□□ -2.22
SMC4-225ENST00000497203 MYL5Q02045 173 aa1.21□□□□□ -2.22
SMC4-225ENST00000497203 C1orf137Q5JT78 98 aa1.21□□□□□ -2.22
SMC4-225ENST00000497203 TMED4Q7Z7H5 227 aa1.21□□□□□ -2.22
SMC4-225ENST00000497203 ZNF418Q8TF45 676 aaPredicted RBP1.21□□□□□ -2.22
SMC4-225ENST00000497203 ODF3Q96PU9 254 aa1.21□□□□□ -2.22
SMC4-225ENST00000497203 TMEM126AQ9H061 195 aa1.21□□□□□ -2.22
SMC4-225ENST00000497203 FLG2Q5D862 2391 aaPredicted RBP1.21□□□□□ -2.22
SMC4-225ENST00000497203 SCN8AQ9UQD0 1980 aa1.21□□□□□ -2.22
SMC4-225ENST00000497203 TNRC6BQ9UPQ9 1833 aaKnown RBP1.2□□□□□ -2.22
SMC4-225ENST00000497203 TRBV6-8A0A0A6YYG3 113 aa1.2□□□□□ -2.22
SMC4-225ENST00000497203 A8MWV9 139 aa1.2□□□□□ -2.22
SMC4-225ENST00000497203 G3V2T6 193 aa1.2□□□□□ -2.22
SMC4-225ENST00000497203 CST8O60676 142 aa1.2□□□□□ -2.22
SMC4-225ENST00000497203 TIMM17BO60830 172 aa1.2□□□□□ -2.22
SMC4-225ENST00000497203 GADD45GO95257 159 aa1.2□□□□□ -2.22
SMC4-225ENST00000497203 DHFRP00374 187 aa1.2□□□□□ -2.22
SMC4-225ENST00000497203 UBE2BP63146 152 aa1.2□□□□□ -2.22
SMC4-225ENST00000497203 RPL19P84098 196 aaKnown RBP1.2□□□□□ -2.22
SMC4-225ENST00000497203 DEFB113Q30KQ7 82 aa1.2□□□□□ -2.22
SMC4-225ENST00000497203 SCGB2B2Q4G0G5 96 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms