RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 CST2P09228 141 aa0.96□□□□□ -2.26
PHC3-216ENST00000497171 ATP5G3P48201 142 aa0.96□□□□□ -2.26
PHC3-216ENST00000497171 BASP1P80723 227 aaKnown RBP0.96□□□□□ -2.26
PHC3-216ENST00000497171 PDE6HQ13956 83 aa0.96□□□□□ -2.26
PHC3-216ENST00000497171 GOLT1AQ6ZVE7 132 aa0.96□□□□□ -2.26
PHC3-216ENST00000497171 SLC30A7Q8NEW0 376 aa0.96□□□□□ -2.26
PHC3-216ENST00000497171 MRPL57Q9BQC6 102 aaKnown RBP0.96□□□□□ -2.26
PHC3-216ENST00000497171 PRADC1Q9BSG0 188 aa0.96□□□□□ -2.26
PHC3-216ENST00000497171 BCL2L10Q9HD36 194 aa0.96□□□□□ -2.26
PHC3-216ENST00000497171 HS3ST2Q9Y278 367 aa0.96□□□□□ -2.26
PHC3-216ENST00000497171 ARFGEF3Q5TH69 2177 aa0.96□□□□□ -2.26
PHC3-216ENST00000497171 TRAV12-1A0A0B4J245 112 aa0.95□□□□□ -2.26
PHC3-216ENST00000497171 TRAV4A0A0B4J268 109 aa0.95□□□□□ -2.26
PHC3-216ENST00000497171 C19orf84I3L1E1 186 aa0.95□□□□□ -2.26
PHC3-216ENST00000497171 BANF1O75531 89 aa0.95□□□□□ -2.26
PHC3-216ENST00000497171 GADD45GO95257 159 aa0.95□□□□□ -2.26
PHC3-216ENST00000497171 IFNA7P01567 189 aa0.95□□□□□ -2.26
PHC3-216ENST00000497171 DYNLT1P63172 113 aa0.95□□□□□ -2.26
PHC3-216ENST00000497171 DEFB113Q30KQ7 82 aa0.95□□□□□ -2.26
PHC3-216ENST00000497171 BCL2L15Q5TBC7 163 aa0.95□□□□□ -2.26
PHC3-216ENST00000497171 TEX261Q6UWH6 196 aa0.95□□□□□ -2.26
PHC3-216ENST00000497171 SOSTDC1Q6X4U4 206 aa0.95□□□□□ -2.26
PHC3-216ENST00000497171 FAM19A2Q8N3H0 131 aa0.95□□□□□ -2.26
PHC3-216ENST00000497171 STAG3L4Q8TBR4 150 aa0.95□□□□□ -2.26
PHC3-216ENST00000497171 TEX47Q8TBZ9 253 aa0.95□□□□□ -2.26
PHC3-216ENST00000497171 RASL12Q9NYN1 266 aa0.95□□□□□ -2.26
PHC3-216ENST00000497171 C22orf24Q9Y442 160 aa0.95□□□□□ -2.26
PHC3-216ENST00000497171 U3KQ87 197 aa0.95□□□□□ -2.26
PHC3-216ENST00000497171 MED12LQ86YW9 2145 aa0.95□□□□□ -2.26
PHC3-216ENST00000497171 RP1P56715 2156 aa0.94□□□□□ -2.26
PHC3-216ENST00000497171 TAF1LQ8IZX4 1826 aa0.94□□□□□ -2.26
PHC3-216ENST00000497171 HELZ2Q9BYK8 2649 aaKnown RBP0.94□□□□□ -2.26
PHC3-216ENST00000497171 TRGV10A0A0A0MS01 117 aa0.94□□□□□ -2.26
PHC3-216ENST00000497171 TIMM17BO60830 172 aa0.94□□□□□ -2.26
PHC3-216ENST00000497171 CAPZBP47756 277 aa0.94□□□□□ -2.26
PHC3-216ENST00000497171 RRN3P1Q2M238 152 aa0.94□□□□□ -2.26
PHC3-216ENST00000497171 HACD4Q5VWC8 232 aa0.94□□□□□ -2.26
PHC3-216ENST00000497171 KRTAP5-10Q6L8G5 202 aa0.94□□□□□ -2.26
PHC3-216ENST00000497171 PDZD9Q8IXQ8 264 aa0.94□□□□□ -2.26
PHC3-216ENST00000497171 Q8N814 137 aa0.94□□□□□ -2.26
PHC3-216ENST00000497171 OR2T35Q8NGX2 323 aa0.94□□□□□ -2.26
PHC3-216ENST00000497171 IMUPQ9GZP8 106 aa0.94□□□□□ -2.26
PHC3-216ENST00000497171 PARVBQ9HBI1 364 aa0.94□□□□□ -2.26
PHC3-216ENST00000497171 C14orf132Q9NPU4 83 aa0.94□□□□□ -2.26
PHC3-216ENST00000497171 ARMC1Q9NVT9 282 aa0.94□□□□□ -2.26
PHC3-216ENST00000497171 ZFP30Q9Y2G7 519 aa0.94□□□□□ -2.26
PHC3-216ENST00000497171 FMN1Q68DA7 1419 aa0.94□□□□□ -2.26
PHC3-216ENST00000497171 PCF11O94913 1555 aaKnown RBP0.94□□□□□ -2.26
PHC3-216ENST00000497171 TRBV19A0A075B6N1 114 aa0.93□□□□□ -2.26
PHC3-216ENST00000497171 TAX1BP3O14907 124 aa0.93□□□□□ -2.26
PHC3-216ENST00000497171 NDUFB3O43676 98 aa0.93□□□□□ -2.26
PHC3-216ENST00000497171 C3orf56Q8N813 242 aa0.93□□□□□ -2.26
PHC3-216ENST00000497171 TMEM254Q8TBM7 123 aa0.93□□□□□ -2.26
PHC3-216ENST00000497171 ZNF418Q8TF45 676 aaPredicted RBP0.93□□□□□ -2.26
PHC3-216ENST00000497171 OBSCN-AS1Q96MR7 158 aa0.93□□□□□ -2.26
PHC3-216ENST00000497171 YPEL2Q96QA6 119 aa0.93□□□□□ -2.26
PHC3-216ENST00000497171 TMEM133Q9H2Q1 129 aa0.93□□□□□ -2.26
PHC3-216ENST00000497171 RNF122Q9H9V4 155 aa0.93□□□□□ -2.26
PHC3-216ENST00000497171 CDC42SE1Q9NRR8 79 aa0.93□□□□□ -2.26
PHC3-216ENST00000497171 ARL5AQ9Y689 179 aa0.93□□□□□ -2.26
PHC3-216ENST00000497171 KIF1BO60333 1816 aa0.93□□□□□ -2.26
PHC3-216ENST00000497171 COL4A5P29400 1685 aa0.93□□□□□ -2.26
PHC3-216ENST00000497171 RIMBP3CA6NJZ7 1639 aa0.93□□□□□ -2.26
PHC3-216ENST00000497171 RIMBP3BA6NNM3 1639 aa0.93□□□□□ -2.26
PHC3-216ENST00000497171 RIMBP3Q9UFD9 1639 aa0.93□□□□□ -2.26
PHC3-216ENST00000497171 G3V2T6 193 aa0.92□□□□□ -2.26
PHC3-216ENST00000497171 DNAL4O96015 105 aa0.92□□□□□ -2.26
PHC3-216ENST00000497171 RNASE4P34096 147 aaKnown RBP0.92□□□□□ -2.26
PHC3-216ENST00000497171 NCALDP61601 193 aa0.92□□□□□ -2.26
PHC3-216ENST00000497171 HSPE1P61604 102 aaKnown RBP0.92□□□□□ -2.26
PHC3-216ENST00000497171 CNBPP62633 177 aaKnown RBP0.92□□□□□ -2.26
PHC3-216ENST00000497171 DEFB115Q30KQ5 88 aa0.92□□□□□ -2.26
PHC3-216ENST00000497171 C1orf137Q5JT78 98 aa0.92□□□□□ -2.26
PHC3-216ENST00000497171 PXT1Q8NFP0 134 aa0.92□□□□□ -2.26
PHC3-216ENST00000497171 C4orf3Q8WVX3 66 aa0.92□□□□□ -2.26
PHC3-216ENST00000497171 SLC25A21Q9BQT8 299 aaPredicted RBP0.92□□□□□ -2.26
PHC3-216ENST00000497171 MED29Q9NX70 200 aa0.92□□□□□ -2.26
PHC3-216ENST00000497171 ALPK2Q86TB3 2170 aa0.91□□□□□ -2.26
PHC3-216ENST00000497171 MIA2Q96PC5 1412 aa0.91□□□□□ -2.26
PHC3-216ENST00000497171 EML6Q6ZMW3 1958 aa0.91□□□□□ -2.26
PHC3-216ENST00000497171 ZNF736B4DX44 427 aaPredicted RBP0.91□□□□□ -2.26
PHC3-216ENST00000497171 NDUFC2O95298 119 aa0.91□□□□□ -2.26
PHC3-216ENST00000497171 CTAG1AP78358 180 aa0.91□□□□□ -2.26
PHC3-216ENST00000497171 MYL5Q02045 173 aa0.91□□□□□ -2.26
PHC3-216ENST00000497171 FAM74A1Q5RGS3 127 aa0.91□□□□□ -2.26
PHC3-216ENST00000497171 C22orf39Q6P5X5 142 aa0.91□□□□□ -2.26
PHC3-216ENST00000497171 ST6GALNAC3Q8NDV1 305 aa0.91□□□□□ -2.26
PHC3-216ENST00000497171 BORCS5Q969J3 196 aa0.91□□□□□ -2.26
PHC3-216ENST00000497171 PSTPIP2Q9H939 334 aa0.91□□□□□ -2.26
PHC3-216ENST00000497171 DLG5Q8TDM6 1919 aa0.91□□□□□ -2.26
PHC3-216ENST00000497171 CEP192Q8TEP8 1941 aa0.9□□□□□ -2.27
PHC3-216ENST00000497171 LOC110117498A0A087WWA1 95 aa0.9□□□□□ -2.27
PHC3-216ENST00000497171 TCRBV4S1A1TA0A5B7 111 aa0.9□□□□□ -2.27
PHC3-216ENST00000497171 TMEM256-PLSCR3K7ERE1 68 aa0.9□□□□□ -2.27
PHC3-216ENST00000497171 GGCTO75223 188 aaKnown RBP0.9□□□□□ -2.27
PHC3-216ENST00000497171 ATG12O94817 140 aa0.9□□□□□ -2.27
PHC3-216ENST00000497171 CYBAP13498 195 aa0.9□□□□□ -2.27
PHC3-216ENST00000497171 ZNF25P17030 456 aaPredicted RBP0.9□□□□□ -2.27
PHC3-216ENST00000497171 NFYBP25208 207 aa0.9□□□□□ -2.27
PHC3-216ENST00000497171 UBE2BP63146 152 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms