RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 CELA2AP08217 269 aa7.39□□□□□ -1.23
HPS4-217ENST00000496385 ERVK11-1P61568 191 aa7.39□□□□□ -1.23
HPS4-217ENST00000496385 DEFB109BQ30KR1 87 aa7.39□□□□□ -1.23
HPS4-217ENST00000496385 ZNF503Q96F45 646 aa7.39□□□□□ -1.23
HPS4-217ENST00000496385 MED12LQ86YW9 2145 aa7.39□□□□□ -1.23
HPS4-217ENST00000496385 C8orf88P0DMB2 117 aa7.38□□□□□ -1.23
HPS4-217ENST00000496385 CA6P23280 308 aa7.38□□□□□ -1.23
HPS4-217ENST00000496385 ATP5IP56385 69 aaPredicted RBP7.38□□□□□ -1.23
HPS4-217ENST00000496385 GAGE5Q13069 117 aa7.38□□□□□ -1.23
HPS4-217ENST00000496385 GAGE6Q13070 117 aa7.38□□□□□ -1.23
HPS4-217ENST00000496385 TRAT1Q6PIZ9 186 aa7.38□□□□□ -1.23
HPS4-217ENST00000496385 C8orf86Q6ZUL3 223 aa7.38□□□□□ -1.23
HPS4-217ENST00000496385 C7orf69Q9H7B7 122 aa7.38□□□□□ -1.23
HPS4-217ENST00000496385 AP5S1Q9NUS5 200 aa7.38□□□□□ -1.23
HPS4-217ENST00000496385 CNTRLQ7Z7A1 2325 aa7.38□□□□□ -1.23
HPS4-217ENST00000496385 KIAA1549Q9HCM3 1950 aa7.38□□□□□ -1.23
HPS4-217ENST00000496385 KBTBD11-OT1A0A1B0GTJ5 212 aa7.38□□□□□ -1.23
HPS4-217ENST00000496385 E9PLD3 99 aa7.38□□□□□ -1.23
HPS4-217ENST00000496385 J3QT63 122 aa7.38□□□□□ -1.23
HPS4-217ENST00000496385 SLC25A17O43808 307 aa7.38□□□□□ -1.23
HPS4-217ENST00000496385 ZFAND5O76080 213 aa7.38□□□□□ -1.23
HPS4-217ENST00000496385 SRSF1Q07955 248 aaKnown RBP eCLIP7.38□□□□□ -1.23
HPS4-217ENST00000496385 KLRD1Q13241 179 aa7.38□□□□□ -1.23
HPS4-217ENST00000496385 FOXE3Q13461 319 aa7.38□□□□□ -1.23
HPS4-217ENST00000496385 SPINK9Q5DT21 86 aa7.38□□□□□ -1.23
HPS4-217ENST00000496385 PPP1R32Q7Z5V6 425 aa7.38□□□□□ -1.23
HPS4-217ENST00000496385 C8orf46Q8TAG6 207 aa7.38□□□□□ -1.23
HPS4-217ENST00000496385 NAA38Q9BRA0 125 aaKnown RBP7.38□□□□□ -1.23
HPS4-217ENST00000496385 ZNF492Q9P255 531 aa7.38□□□□□ -1.23
HPS4-217ENST00000496385 AMMECR1Q9Y4X0 333 aaPredicted RBP7.38□□□□□ -1.23
HPS4-217ENST00000496385 SNAI2O43623 268 aa7.37□□□□□ -1.23
HPS4-217ENST00000496385 SS18L1O75177 396 aaPredicted RBP7.37□□□□□ -1.23
HPS4-217ENST00000496385 B4GALT1P15291 398 aa7.37□□□□□ -1.23
HPS4-217ENST00000496385 FCGR2BP31994 310 aaPredicted RBP7.37□□□□□ -1.23
HPS4-217ENST00000496385 FOXA3P55318 350 aaPredicted RBP7.37□□□□□ -1.23
HPS4-217ENST00000496385 RBPMS2Q6ZRY4 209 aaKnown RBP7.37□□□□□ -1.23
HPS4-217ENST00000496385 RPRMLQ8N4K4 120 aa7.37□□□□□ -1.23
HPS4-217ENST00000496385 NANOS1Q8WY41 292 aaKnown RBP7.37□□□□□ -1.23
HPS4-217ENST00000496385 PRSS22Q9GZN4 317 aa7.37□□□□□ -1.23
HPS4-217ENST00000496385 RPP21Q9H633 154 aaKnown RBP7.37□□□□□ -1.23
HPS4-217ENST00000496385 RALYQ9UKM9 306 aaKnown RBP7.37□□□□□ -1.23
HPS4-217ENST00000496385 PSG8Q9UQ74 426 aa7.37□□□□□ -1.23
HPS4-217ENST00000496385 INSIG2Q9Y5U4 225 aa7.37□□□□□ -1.23
HPS4-217ENST00000496385 IGLV3-12A0A075B6K2 115 aa7.37□□□□□ -1.23
HPS4-217ENST00000496385 OOEPA6NGQ2 149 aa7.37□□□□□ -1.23
HPS4-217ENST00000496385 CHEK1O14757 476 aa7.37□□□□□ -1.23
HPS4-217ENST00000496385 MGST3O14880 152 aa7.37□□□□□ -1.23
HPS4-217ENST00000496385 INO80CQ6PI98 192 aaPredicted RBP7.37□□□□□ -1.23
HPS4-217ENST00000496385 ZNF808Q8N4W9 903 aaPredicted RBP7.37□□□□□ -1.23
HPS4-217ENST00000496385 IGSF10Q6WRI0 2623 aa7.37□□□□□ -1.23
HPS4-217ENST00000496385 SHISA9B4DS77 424 aa7.37□□□□□ -1.23
HPS4-217ENST00000496385 HAX1O00165 279 aa7.37□□□□□ -1.23
HPS4-217ENST00000496385 PEX7O00628 323 aa7.37□□□□□ -1.23
HPS4-217ENST00000496385 OR2H2O95918 312 aa7.37□□□□□ -1.23
HPS4-217ENST00000496385 DSCR4P56555 118 aaPredicted RBP7.37□□□□□ -1.23
HPS4-217ENST00000496385 ERVK-16P61578 105 aa7.37□□□□□ -1.23
HPS4-217ENST00000496385 WFDC2Q14508 124 aa7.37□□□□□ -1.23
HPS4-217ENST00000496385 Q6ZR03 302 aa7.37□□□□□ -1.23
HPS4-217ENST00000496385 GATD1Q8NB37 220 aa7.37□□□□□ -1.23
HPS4-217ENST00000496385 PHLDA1Q8WV24 401 aaPredicted RBP7.37□□□□□ -1.23
HPS4-217ENST00000496385 SLC25A33Q9BSK2 321 aa7.37□□□□□ -1.23
HPS4-217ENST00000496385 A0A1B0GW15 77 aa7.36□□□□□ -1.23
HPS4-217ENST00000496385 TMEM30CPA0ZSE6 113 aa7.36□□□□□ -1.23
HPS4-217ENST00000496385 VSTM5A8MXK1 200 aa7.36□□□□□ -1.23
HPS4-217ENST00000496385 THBDP07204 575 aa7.36□□□□□ -1.23
HPS4-217ENST00000496385 SP1P08047 785 aa7.36□□□□□ -1.23
HPS4-217ENST00000496385 CELA3AP09093 270 aa7.36□□□□□ -1.23
HPS4-217ENST00000496385 PATE4P0C8F1 98 aa7.36□□□□□ -1.23
HPS4-217ENST00000496385 ZNF146Q15072 292 aa7.36□□□□□ -1.23
HPS4-217ENST00000496385 AAED1Q7RTV5 226 aa7.36□□□□□ -1.23
HPS4-217ENST00000496385 RPS19BP1Q86WX3 136 aaKnown RBP7.36□□□□□ -1.23
HPS4-217ENST00000496385 OR9G1Q8NH87 305 aa7.36□□□□□ -1.23
HPS4-217ENST00000496385 TM2D2Q9BX73 214 aa7.36□□□□□ -1.23
HPS4-217ENST00000496385 LINC00312Q9Y6C7 94 aa7.36□□□□□ -1.23
HPS4-217ENST00000496385 IGHV3-15A0A0B4J1V0 119 aa7.36□□□□□ -1.23
HPS4-217ENST00000496385 TMEM8BA6NDV4 472 aa7.36□□□□□ -1.23
HPS4-217ENST00000496385 K7ENP7 123 aa7.36□□□□□ -1.23
HPS4-217ENST00000496385 SPINK8P0C7L1 97 aa7.36□□□□□ -1.23
HPS4-217ENST00000496385 CCL11P51671 97 aa7.36□□□□□ -1.23
HPS4-217ENST00000496385 GAGE13Q4V321 117 aa7.36□□□□□ -1.23
HPS4-217ENST00000496385 TCF19Q9Y242 345 aa7.36□□□□□ -1.23
HPS4-217ENST00000496385 POLDIP2Q9Y2S7 368 aa7.36□□□□□ -1.23
HPS4-217ENST00000496385 KLF12Q9Y4X4 402 aa7.36□□□□□ -1.23
HPS4-217ENST00000496385 CHD6Q8TD26 2715 aa7.35□□□□□ -1.23
HPS4-217ENST00000496385 LOC102723996A0A087X1L8 192 aa7.35□□□□□ -1.23
HPS4-217ENST00000496385 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.35□□□□□ -1.23
HPS4-217ENST00000496385 ACTL6BO94805 426 aa7.35□□□□□ -1.23
HPS4-217ENST00000496385 NGFP01138 241 aa7.35□□□□□ -1.23
HPS4-217ENST00000496385 KIR2DS2P43631 304 aa7.35□□□□□ -1.23
HPS4-217ENST00000496385 Q0VFX4 171 aa7.35□□□□□ -1.23
HPS4-217ENST00000496385 TAL2Q16559 108 aa7.35□□□□□ -1.23
HPS4-217ENST00000496385 ABHD12Q8N2K0 398 aa7.35□□□□□ -1.23
HPS4-217ENST00000496385 FGFBP3Q8TAT2 258 aa7.35□□□□□ -1.23
HPS4-217ENST00000496385 RAX2Q96IS3 184 aa7.35□□□□□ -1.23
HPS4-217ENST00000496385 DOCK10Q96BY6 2186 aa7.35□□□□□ -1.23
HPS4-217ENST00000496385 SRRM4A7MD48 611 aaKnown RBP7.35□□□□□ -1.23
HPS4-217ENST00000496385 LINC00473A8K010 186 aa7.35□□□□□ -1.23
HPS4-217ENST00000496385 COX6A1P12074 109 aa7.35□□□□□ -1.23
HPS4-217ENST00000496385 HLA-DRB4P13762 266 aa7.35□□□□□ -1.23
HPS4-217ENST00000496385 ETDBQ3ZM63 59 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms