RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 PFDN2Q9UHV9 154 aa12.61□□□□□ -0.39
COMMD3-214ENST00000496071 RABAC1Q9UI14 185 aa12.61□□□□□ -0.39
COMMD3-214ENST00000496071 PAIP2BQ9ULR5 123 aaKnown RBP12.61□□□□□ -0.39
COMMD3-214ENST00000496071 SPRY2O43597 315 aa12.6□□□□□ -0.39
COMMD3-214ENST00000496071 RPL35AP18077 110 aaKnown RBP12.6□□□□□ -0.39
COMMD3-214ENST00000496071 NUP62P37198 522 aaPredicted RBP12.6□□□□□ -0.39
COMMD3-214ENST00000496071 USF2Q15853 346 aaPredicted RBP12.6□□□□□ -0.39
COMMD3-214ENST00000496071 STXBP6Q8NFX7 210 aa12.6□□□□□ -0.39
COMMD3-214ENST00000496071 S100ZQ8WXG8 99 aa12.6□□□□□ -0.39
COMMD3-214ENST00000496071 K7EQG2 157 aa12.59□□□□□ -0.39
COMMD3-214ENST00000496071 NKX2-1P43699 371 aaPredicted RBP12.59□□□□□ -0.39
COMMD3-214ENST00000496071 DEFB131AP59861 70 aa12.59□□□□□ -0.39
COMMD3-214ENST00000496071 CSTL1Q9H114 145 aa12.59□□□□□ -0.39
COMMD3-214ENST00000496071 C20orf85Q9H1P6 137 aa12.59□□□□□ -0.39
COMMD3-214ENST00000496071 STRAPQ9Y3F4 350 aaKnown RBP12.59□□□□□ -0.39
COMMD3-214ENST00000496071 BUB3O43684 328 aa12.58□□□□□ -0.4
COMMD3-214ENST00000496071 TCRBP04435 133 aa12.58□□□□□ -0.4
COMMD3-214ENST00000496071 ZNF124Q15973 351 aa12.58□□□□□ -0.4
COMMD3-214ENST00000496071 DEFB135Q30KP9 77 aa12.58□□□□□ -0.4
COMMD3-214ENST00000496071 SPANXN5Q5MJ07 72 aa12.58□□□□□ -0.4
COMMD3-214ENST00000496071 ZFAND6Q6FIF0 208 aa12.58□□□□□ -0.4
COMMD3-214ENST00000496071 OR8G2PQ6IF36 304 aa12.58□□□□□ -0.4
COMMD3-214ENST00000496071 OR4D5Q8NGN0 318 aa12.58□□□□□ -0.4
COMMD3-214ENST00000496071 MITD1Q8WV92 249 aa12.58□□□□□ -0.4
COMMD3-214ENST00000496071 GLMPQ8WWB7 406 aa12.58□□□□□ -0.4
COMMD3-214ENST00000496071 RNF183Q96D59 192 aa12.58□□□□□ -0.4
COMMD3-214ENST00000496071 RNF125Q96EQ8 232 aa12.58□□□□□ -0.4
COMMD3-214ENST00000496071 TRGV9Q99603 122 aa12.58□□□□□ -0.4
COMMD3-214ENST00000496071 IGKV1D-37A0A075B6S9 117 aa12.57□□□□□ -0.4
COMMD3-214ENST00000496071 MPTX1A8MV57 137 aa12.57□□□□□ -0.4
COMMD3-214ENST00000496071 SNRPGP15A8MWD9 76 aa12.57□□□□□ -0.4
COMMD3-214ENST00000496071 CFDP00746 253 aaPredicted RBP12.57□□□□□ -0.4
COMMD3-214ENST00000496071 ZNF90Q03938 601 aa12.57□□□□□ -0.4
COMMD3-214ENST00000496071 THAP8Q8NA92 274 aa12.57□□□□□ -0.4
COMMD3-214ENST00000496071 DCANP1Q8TF63 244 aa12.57□□□□□ -0.4
COMMD3-214ENST00000496071 PBDC1Q9BVG4 233 aa12.57□□□□□ -0.4
COMMD3-214ENST00000496071 A6NHS1 94 aa12.56□□□□□ -0.4
COMMD3-214ENST00000496071 PRSS46E5RG02 174 aa12.56□□□□□ -0.4
COMMD3-214ENST00000496071 POLR2GP62487 172 aaKnown RBP eCLIP12.56□□□□□ -0.4
COMMD3-214ENST00000496071 IAH1Q2TAA2 248 aaPredicted RBP12.56□□□□□ -0.4
COMMD3-214ENST00000496071 FAM24BQ8N5W8 94 aa12.56□□□□□ -0.4
COMMD3-214ENST00000496071 SMIM8Q96KF7 97 aa12.56□□□□□ -0.4
COMMD3-214ENST00000496071 PSENENQ9NZ42 101 aa12.56□□□□□ -0.4
COMMD3-214ENST00000496071 LEMD1Q68G75 181 aa12.55□□□□□ -0.4
COMMD3-214ENST00000496071 SIGLEC15Q6ZMC9 328 aa12.55□□□□□ -0.4
COMMD3-214ENST00000496071 STHQ8IWL8 128 aa12.55□□□□□ -0.4
COMMD3-214ENST00000496071 GATAD1Q8WUU5 269 aa12.55□□□□□ -0.4
COMMD3-214ENST00000496071 SEPSECSQ9HD40 501 aaKnown RBP12.55□□□□□ -0.4
COMMD3-214ENST00000496071 FBXL17Q9UF56 701 aa12.55□□□□□ -0.4
COMMD3-214ENST00000496071 TRAV6A0A075B6T7 132 aa12.54□□□□□ -0.4
COMMD3-214ENST00000496071 H3BP45 60 aa12.54□□□□□ -0.4
COMMD3-214ENST00000496071 ZNF688P0C7X2 276 aa12.54□□□□□ -0.4
COMMD3-214ENST00000496071 LYZP61626 148 aa12.54□□□□□ -0.4
COMMD3-214ENST00000496071 C1orf194Q5T5A4 169 aa12.54□□□□□ -0.4
COMMD3-214ENST00000496071 MZT2BQ6NZ67 158 aa12.54□□□□□ -0.4
COMMD3-214ENST00000496071 ZBTB8BQ8NAP8 495 aaPredicted RBP12.54□□□□□ -0.4
COMMD3-214ENST00000496071 RAB40CQ96S21 281 aa12.54□□□□□ -0.4
COMMD3-214ENST00000496071 NRN1Q9NPD7 142 aa12.54□□□□□ -0.4
COMMD3-214ENST00000496071 IGKV1OR2-108A0A075B7D4 117 aa12.53□□□□□ -0.4
COMMD3-214ENST00000496071 FAM240BA0A1B0GVZ2 78 aa12.53□□□□□ -0.4
COMMD3-214ENST00000496071 SSSCA1O60232 199 aa12.53□□□□□ -0.4
COMMD3-214ENST00000496071 SCGB1D2O95969 90 aa12.53□□□□□ -0.4
COMMD3-214ENST00000496071 TAS2R30P59541 319 aa12.53□□□□□ -0.4
COMMD3-214ENST00000496071 SNRPD3P62318 126 aaKnown RBP12.53□□□□□ -0.4
COMMD3-214ENST00000496071 AKR1C1Q04828 323 aa12.53□□□□□ -0.4
COMMD3-214ENST00000496071 OR2F1Q13607 317 aa12.53□□□□□ -0.4
COMMD3-214ENST00000496071 ZNF846Q147U1 533 aa12.53□□□□□ -0.4
COMMD3-214ENST00000496071 ZNF431Q8TF32 576 aaPredicted RBP12.53□□□□□ -0.4
COMMD3-214ENST00000496071 NUDT15Q9NV35 164 aa12.53□□□□□ -0.4
COMMD3-214ENST00000496071 GSKIPQ9P0R6 139 aa12.53□□□□□ -0.4
COMMD3-214ENST00000496071 H2AFB2P0C5Z0 115 aa12.52□□□□□ -0.41
COMMD3-214ENST00000496071 S100A7P31151 101 aa12.52□□□□□ -0.41
COMMD3-214ENST00000496071 MORN3Q6PF18 240 aaPredicted RBP12.52□□□□□ -0.41
COMMD3-214ENST00000496071 TMEM144Q7Z5S9 345 aa12.52□□□□□ -0.41
COMMD3-214ENST00000496071 TMEM217Q8N7C4 229 aa12.52□□□□□ -0.41
COMMD3-214ENST00000496071 BPIFCQ8NFQ6 507 aa12.52□□□□□ -0.41
COMMD3-214ENST00000496071 PPP1R14BQ96C90 147 aa12.52□□□□□ -0.41
COMMD3-214ENST00000496071 WDR12Q9GZL7 423 aaKnown RBP12.52□□□□□ -0.41
COMMD3-214ENST00000496071 SLC45A2Q9UMX9 530 aa12.52□□□□□ -0.41
COMMD3-214ENST00000496071 A0A0J9YWU9 116 aa12.51□□□□□ -0.41
COMMD3-214ENST00000496071 TSC22D2O75157 780 aa12.51□□□□□ -0.41
COMMD3-214ENST00000496071 CA1P00915 261 aaPredicted RBP12.51□□□□□ -0.41
COMMD3-214ENST00000496071 ATF4P18848 351 aaPredicted RBP12.51□□□□□ -0.41
COMMD3-214ENST00000496071 PAX9P55771 341 aa12.51□□□□□ -0.41
COMMD3-214ENST00000496071 TMEM41BQ5BJD5 291 aa12.51□□□□□ -0.41
COMMD3-214ENST00000496071 ACOT7LQ6ZUV0 252 aa12.51□□□□□ -0.41
COMMD3-214ENST00000496071 TRPT1Q86TN4 253 aaKnown RBP12.51□□□□□ -0.41
COMMD3-214ENST00000496071 PTTG2Q9NZH5 202 aa12.51□□□□□ -0.41
COMMD3-214ENST00000496071 KMT2CQ8NEZ4 4911 aaKnown RBP12.5□□□□□ -0.41
COMMD3-214ENST00000496071 PMS2P5A8MQ11 134 aa12.5□□□□□ -0.41
COMMD3-214ENST00000496071 FNDC10F2Z333 226 aa12.5□□□□□ -0.41
COMMD3-214ENST00000496071 SPP1P10451 314 aa12.5□□□□□ -0.41
COMMD3-214ENST00000496071 ASAH1Q13510 395 aa12.5□□□□□ -0.41
COMMD3-214ENST00000496071 PSMG4Q5JS54 123 aa12.5□□□□□ -0.41
COMMD3-214ENST00000496071 TMEM14EPQ6UXP3 125 aa12.5□□□□□ -0.41
COMMD3-214ENST00000496071 C12orf45Q8N5I9 185 aaPredicted RBP12.5□□□□□ -0.41
COMMD3-214ENST00000496071 OR10P1Q8NGE3 313 aa12.5□□□□□ -0.41
COMMD3-214ENST00000496071 RARRES2Q99969 163 aa12.5□□□□□ -0.41
COMMD3-214ENST00000496071 NPVFQ9HCQ7 196 aa12.5□□□□□ -0.41
COMMD3-214ENST00000496071 SMCO3A2RU48 225 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms