RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 TBR1Q16650 682 aa10.46□□□□□ -0.74
PTPN7-217ENST00000495688 SPATA45Q537H7 98 aa10.46□□□□□ -0.74
PTPN7-217ENST00000495688 PDPNQ86YL7 162 aa10.46□□□□□ -0.74
PTPN7-217ENST00000495688 TMEM208Q9BTX3 173 aa10.46□□□□□ -0.74
PTPN7-217ENST00000495688 WASHC3Q9Y3C0 194 aa10.46□□□□□ -0.74
PTPN7-217ENST00000495688 CD24P25063 80 aa10.45□□□□□ -0.74
PTPN7-217ENST00000495688 TNXAQ16473 311 aa10.45□□□□□ -0.74
PTPN7-217ENST00000495688 OR1L4Q8NGR5 311 aa10.45□□□□□ -0.74
PTPN7-217ENST00000495688 NBASA2RRP1 2371 aa10.45□□□□□ -0.74
PTPN7-217ENST00000495688 INS-IGF2F8WCM5 200 aa10.45□□□□□ -0.74
PTPN7-217ENST00000495688 NDUFB3O43676 98 aa10.45□□□□□ -0.74
PTPN7-217ENST00000495688 LOXP28300 417 aaPredicted RBP10.45□□□□□ -0.74
PTPN7-217ENST00000495688 BPIFB3P59826 476 aa10.45□□□□□ -0.74
PTPN7-217ENST00000495688 LINC00322Q6ZN03 302 aaPredicted RBP10.45□□□□□ -0.74
PTPN7-217ENST00000495688 ARL6IP6Q8N6S5 226 aa10.45□□□□□ -0.74
PTPN7-217ENST00000495688 VSTM2AQ8TAG5 236 aa10.45□□□□□ -0.74
PTPN7-217ENST00000495688 TNFRSF19Q9NS68 423 aa10.45□□□□□ -0.74
PTPN7-217ENST00000495688 PGPA6NDG6 321 aa10.44□□□□□ -0.74
PTPN7-217ENST00000495688 SLC25A5P05141 298 aaKnown RBP10.44□□□□□ -0.74
PTPN7-217ENST00000495688 PRB4P10163 310 aaPredicted RBP10.44□□□□□ -0.74
PTPN7-217ENST00000495688 MMDQ15546 238 aa10.44□□□□□ -0.74
PTPN7-217ENST00000495688 TCF24Q7RTU0 167 aa10.44□□□□□ -0.74
PTPN7-217ENST00000495688 THAP8Q8NA92 274 aa10.44□□□□□ -0.74
PTPN7-217ENST00000495688 OR4B1Q8NGF8 309 aa10.44□□□□□ -0.74
PTPN7-217ENST00000495688 TMEM186Q96B77 213 aa10.44□□□□□ -0.74
PTPN7-217ENST00000495688 C7orf69Q9H7B7 122 aa10.44□□□□□ -0.74
PTPN7-217ENST00000495688 SSUH2Q9Y2M2 353 aa10.44□□□□□ -0.74
PTPN7-217ENST00000495688 SPTA1P02549 2419 aa10.44□□□□□ -0.74
PTPN7-217ENST00000495688 IGLC7A0M8Q6 106 aa10.44□□□□□ -0.74
PTPN7-217ENST00000495688 KLK10O43240 276 aa10.44□□□□□ -0.74
PTPN7-217ENST00000495688 NPSP0C0P6 89 aa10.44□□□□□ -0.74
PTPN7-217ENST00000495688 MYCNOSP40205 109 aa10.44□□□□□ -0.74
PTPN7-217ENST00000495688 SUB1P53999 127 aaKnown RBP eCLIP10.44□□□□□ -0.745e-7■■■■■ 33
PTPN7-217ENST00000495688 C21orf62-AS1Q17RA5 79 aa10.44□□□□□ -0.74
PTPN7-217ENST00000495688 COX19Q49B96 90 aa10.44□□□□□ -0.74
PTPN7-217ENST00000495688 LRRC10Q5BKY1 277 aa10.44□□□□□ -0.74
PTPN7-217ENST00000495688 CLEC7AQ9BXN2 247 aa10.44□□□□□ -0.74
PTPN7-217ENST00000495688 M0QZK8 103 aa10.43□□□□□ -0.74
PTPN7-217ENST00000495688 CRYABP02511 175 aaKnown RBP10.43□□□□□ -0.74
PTPN7-217ENST00000495688 FAM87AP0C7U9 286 aa10.43□□□□□ -0.74
PTPN7-217ENST00000495688 PRRX1P54821 245 aa10.43□□□□□ -0.74
PTPN7-217ENST00000495688 Q71RC1 249 aaPredicted RBP10.43□□□□□ -0.74
PTPN7-217ENST00000495688 LPAR2Q9HBW0 351 aa10.43□□□□□ -0.74
PTPN7-217ENST00000495688 EPDR1Q9UM22 224 aa10.43□□□□□ -0.74
PTPN7-217ENST00000495688 DLX6P56179 175 aa10.43□□□□□ -0.74
PTPN7-217ENST00000495688 UBE2G1P62253 170 aa10.43□□□□□ -0.74
PTPN7-217ENST00000495688 FAM231DQ6ZW35 169 aa10.43□□□□□ -0.74
PTPN7-217ENST00000495688 C11orf42Q8N5U0 333 aa10.43□□□□□ -0.74
PTPN7-217ENST00000495688 OR2D3Q8NGH3 330 aa10.43□□□□□ -0.74
PTPN7-217ENST00000495688 GRAMD2BQ96HH9 432 aa10.43□□□□□ -0.74
PTPN7-217ENST00000495688 TNFRSF13BO14836 293 aaPredicted RBP10.42□□□□□ -0.74
PTPN7-217ENST00000495688 VMA21Q3ZAQ7 101 aa10.42□□□□□ -0.74
PTPN7-217ENST00000495688 PRSS33Q8NF86 280 aa10.42□□□□□ -0.74
PTPN7-217ENST00000495688 OR4A5Q8NH83 315 aa10.42□□□□□ -0.74
PTPN7-217ENST00000495688 M0QZ24 198 aa10.42□□□□□ -0.74
PTPN7-217ENST00000495688 HYPMO75409 117 aa10.42□□□□□ -0.74
PTPN7-217ENST00000495688 NBEAP1P0C6P0 100 aa10.42□□□□□ -0.74
PTPN7-217ENST00000495688 IGHV1-8P0DP01 117 aa10.42□□□□□ -0.74
PTPN7-217ENST00000495688 IGF2-ASQ6U949 168 aa10.42□□□□□ -0.74
PTPN7-217ENST00000495688 WIPF2Q8TF74 440 aaPredicted RBP10.42□□□□□ -0.74
PTPN7-217ENST00000495688 BORCS7Q96B45 105 aa10.42□□□□□ -0.74
PTPN7-217ENST00000495688 HSBP1O75506 76 aa10.41□□□□□ -0.74
PTPN7-217ENST00000495688 TOX4O94842 621 aa10.41□□□□□ -0.74
PTPN7-217ENST00000495688 IGLC2P0DOY2 106 aa10.41□□□□□ -0.74
PTPN7-217ENST00000495688 IGLC3P0DOY3 106 aa10.41□□□□□ -0.74
PTPN7-217ENST00000495688 EBLN2Q6P2I7 272 aa10.41□□□□□ -0.74
PTPN7-217ENST00000495688 RNASEKQ6P5S7 137 aaKnown RBP10.41□□□□□ -0.74
PTPN7-217ENST00000495688 KIR3DL3Q8N743 410 aa10.41□□□□□ -0.74
PTPN7-217ENST00000495688 RNASE6Q93091 150 aaKnown RBP10.41□□□□□ -0.74
PTPN7-217ENST00000495688 ALKBH7Q9BT30 221 aaPredicted RBP10.41□□□□□ -0.74
PTPN7-217ENST00000495688 SH2D7A6NKC9 451 aaPredicted RBP10.41□□□□□ -0.74
PTPN7-217ENST00000495688 DLEU1O43261 78 aa10.41□□□□□ -0.74
PTPN7-217ENST00000495688 FOXA3P55318 350 aaPredicted RBP10.41□□□□□ -0.74
PTPN7-217ENST00000495688 PMCHL1Q16048 86 aa10.41□□□□□ -0.74
PTPN7-217ENST00000495688 TMEM155Q4W5P6 130 aa10.41□□□□□ -0.74
PTPN7-217ENST00000495688 LINC00311Q8N616 119 aa10.41□□□□□ -0.74
PTPN7-217ENST00000495688 ZNF596Q8TC21 504 aa10.41□□□□□ -0.74
PTPN7-217ENST00000495688 TRAV8-1A0A0A6YYK1 113 aa10.41□□□□□ -0.74
PTPN7-217ENST00000495688 LYNX1G3V0Z9 82 aa10.41□□□□□ -0.74
PTPN7-217ENST00000495688 LYNX1P0DP58 116 aa10.41□□□□□ -0.74
PTPN7-217ENST00000495688 HIST1H1EP10412 219 aaKnown RBP10.41□□□□□ -0.74
PTPN7-217ENST00000495688 GTSF1Q8WW33 167 aa10.41□□□□□ -0.74
PTPN7-217ENST00000495688 PERPQ96FX8 193 aa10.41□□□□□ -0.74
PTPN7-217ENST00000495688 TXN2Q99757 166 aa10.41□□□□□ -0.74
PTPN7-217ENST00000495688 ARHGAP32A7KAX9 2087 aa10.4□□□□□ -0.74
PTPN7-217ENST00000495688 M0R2Z0 102 aa10.4□□□□□ -0.74
PTPN7-217ENST00000495688 PRRG2O14669 202 aa10.4□□□□□ -0.74
PTPN7-217ENST00000495688 CRYGCP07315 174 aa10.4□□□□□ -0.74
PTPN7-217ENST00000495688 ZNF137PP52743 207 aa10.4□□□□□ -0.74
PTPN7-217ENST00000495688 Q56UQ5 140 aa10.4□□□□□ -0.74
PTPN7-217ENST00000495688 Q6ZN92 141 aa10.4□□□□□ -0.74
PTPN7-217ENST00000495688 URB1-AS1Q96HZ7 61 aa10.4□□□□□ -0.74
PTPN7-217ENST00000495688 MLST8Q9BVC4 326 aa10.4□□□□□ -0.74
PTPN7-217ENST00000495688 MRPL27Q9P0M9 148 aaKnown RBP10.4□□□□□ -0.74
PTPN7-217ENST00000495688 ANKHD1Q8IWZ3 2542 aaKnown RBP10.4□□□□□ -0.74
PTPN7-217ENST00000495688 SPATA12Q7Z6I5 190 aa10.4□□□□□ -0.75
PTPN7-217ENST00000495688 STPG4Q8N801 248 aa10.4□□□□□ -0.75
PTPN7-217ENST00000495688 GPR82Q96P67 336 aa10.4□□□□□ -0.75
PTPN7-217ENST00000495688 ASCL2Q99929 193 aa10.4□□□□□ -0.75
PTPN7-217ENST00000495688 DYNLRB1Q9NP97 96 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms