RNA–Protein interactions for RNA: ENST00000495615.5

CBWD5-231, Transcript of COBW domain containing 5, human

TSL 3

Gene CBWD5, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD5-231	ENST00000495615	COL1A1	P02452	1464 aa	Predicted RBP	0.42	□□□□□ -2.34
CBWD5-231	ENST00000495615	KDM6A	O15550	1401 aa	Predicted RBP	0.42	□□□□□ -2.34
CBWD5-231	ENST00000495615	IGHV1-58	A0A0C4DH39	117 aa		0.42	□□□□□ -2.34
CBWD5-231	ENST00000495615	FAM236D	A0A1B0GTK5	79 aa		0.42	□□□□□ -2.34
CBWD5-231	ENST00000495615	C1orf196	B1AJZ1	125 aa		0.42	□□□□□ -2.34
CBWD5-231	ENST00000495615	NUPR1	O60356	82 aa		0.42	□□□□□ -2.34
CBWD5-231	ENST00000495615	RPP14	O95059	124 aa	Known RBP	0.42	□□□□□ -2.34
CBWD5-231	ENST00000495615	FAM236C	P0DP71	79 aa		0.42	□□□□□ -2.34
CBWD5-231	ENST00000495615	CEBPG	P53567	150 aa		0.42	□□□□□ -2.34
CBWD5-231	ENST00000495615	IMPG1	Q17R60	797 aa		0.42	□□□□□ -2.34
CBWD5-231	ENST00000495615	IAH1	Q2TAA2	248 aa	Predicted RBP	0.42	□□□□□ -2.34
CBWD5-231	ENST00000495615	LINC00575	Q6W349	94 aa		0.42	□□□□□ -2.34
CBWD5-231	ENST00000495615	ARL5B	Q96KC2	179 aa		0.42	□□□□□ -2.34
CBWD5-231	ENST00000495615	LINC00467	Q9BRT7	94 aa		0.42	□□□□□ -2.34
CBWD5-231	ENST00000495615	TVP23B	Q9NYZ1	205 aa		0.42	□□□□□ -2.34
CBWD5-231	ENST00000495615	FBXO5	Q9UKT4	447 aa		0.42	□□□□□ -2.34
CBWD5-231	ENST00000495615	TNFSF18	Q9UNG2	199 aa		0.42	□□□□□ -2.34
CBWD5-231	ENST00000495615	PLXND1	Q9Y4D7	1925 aa		0.42	□□□□□ -2.34
CBWD5-231	ENST00000495615	NEB	P20929	6669 aa		0.42	□□□□□ -2.34
CBWD5-231	ENST00000495615	UBR4	Q5T4S7	5183 aa		0.42	□□□□□ -2.34
CBWD5-231	ENST00000495615	SCN10A	Q9Y5Y9	1956 aa		0.41	□□□□□ -2.34
CBWD5-231	ENST00000495615	hCG_1818297	A0A087WSY0	165 aa		0.41	□□□□□ -2.34
CBWD5-231	ENST00000495615		A8MT66	165 aa		0.41	□□□□□ -2.34
CBWD5-231	ENST00000495615	CYB5B	O43169	146 aa		0.41	□□□□□ -2.34
CBWD5-231	ENST00000495615	NIPSNAP2	O75323	286 aa		0.41	□□□□□ -2.34
CBWD5-231	ENST00000495615	LYPLA2	O95372	231 aa		0.41	□□□□□ -2.34
CBWD5-231	ENST00000495615	CNIH1	O95406	144 aa		0.41	□□□□□ -2.34
CBWD5-231	ENST00000495615	IGLV3-1	P01715	115 aa		0.41	□□□□□ -2.34
CBWD5-231	ENST00000495615	RPS17	P08708	135 aa	Known RBP	0.41	□□□□□ -2.34
CBWD5-231	ENST00000495615	SMIM17	P0DL12	118 aa		0.41	□□□□□ -2.34
CBWD5-231	ENST00000495615	EIF5A	P63241	154 aa	Known RBP	0.41	□□□□□ -2.34
CBWD5-231	ENST00000495615	ITGB3BP	Q13352	177 aa	Predicted RBP	0.41	□□□□□ -2.34
CBWD5-231	ENST00000495615	PPP1R14B	Q96C90	147 aa		0.41	□□□□□ -2.34
CBWD5-231	ENST00000495615	SLAMF6	Q96DU3	332 aa		0.41	□□□□□ -2.34
CBWD5-231	ENST00000495615	TP53RK	Q96S44	253 aa		0.41	□□□□□ -2.34
CBWD5-231	ENST00000495615	TRIM4	Q9C037	500 aa		0.41	□□□□□ -2.34
CBWD5-231	ENST00000495615	ADCY9	O60503	1353 aa		0.41	□□□□□ -2.34
CBWD5-231	ENST00000495615	MACF1	Q9UPN3	7388 aa	Known RBP	0.41	□□□□□ -2.34
CBWD5-231	ENST00000495615	MDN1	Q9NU22	5596 aa		0.41	□□□□□ -2.34
CBWD5-231	ENST00000495615	UNC13C	Q8NB66	2214 aa		0.41	□□□□□ -2.34
CBWD5-231	ENST00000495615	MYH10	P35580	1976 aa		0.41	□□□□□ -2.34
CBWD5-231	ENST00000495615	CHD3	Q12873	2000 aa	Known RBP	0.4	□□□□□ -2.34
CBWD5-231	ENST00000495615	TNS3	Q68CZ2	1445 aa		0.4	□□□□□ -2.34
CBWD5-231	ENST00000495615	ZNF106	Q9H2Y7	1883 aa	Known RBP	0.4	□□□□□ -2.35
CBWD5-231	ENST00000495615	hADV38S2	A0JD32	116 aa		0.4	□□□□□ -2.35
CBWD5-231	ENST00000495615	GADD45G	O95257	159 aa		0.4	□□□□□ -2.35
CBWD5-231	ENST00000495615	ZNF682	O95780	498 aa		0.4	□□□□□ -2.35
CBWD5-231	ENST00000495615	C8G	P07360	202 aa		0.4	□□□□□ -2.35
CBWD5-231	ENST00000495615	AES	Q08117	197 aa		0.4	□□□□□ -2.35
CBWD5-231	ENST00000495615	LYRM7	Q5U5X0	104 aa		0.4	□□□□□ -2.35
CBWD5-231	ENST00000495615	OTUD6B	Q8N6M0	293 aa		0.4	□□□□□ -2.35
CBWD5-231	ENST00000495615	SLC30A7	Q8NEW0	376 aa		0.4	□□□□□ -2.35
CBWD5-231	ENST00000495615	WFDC5	Q8TCV5	224 aa		0.4	□□□□□ -2.35
CBWD5-231	ENST00000495615	PRADC1	Q9BSG0	188 aa		0.4	□□□□□ -2.35
CBWD5-231	ENST00000495615	PARD6G	Q9BYG4	376 aa	Predicted RBP	0.4	□□□□□ -2.35
CBWD5-231	ENST00000495615	RNF122	Q9H9V4	155 aa		0.4	□□□□□ -2.35
CBWD5-231	ENST00000495615	ROBO3	Q96MS0	1386 aa		0.4	□□□□□ -2.35
CBWD5-231	ENST00000495615	KIAA1549	Q9HCM3	1950 aa		0.39	□□□□□ -2.35
CBWD5-231	ENST00000495615	SCN8A	Q9UQD0	1980 aa		0.39	□□□□□ -2.35
CBWD5-231	ENST00000495615	KPNA3	O00505	521 aa	Predicted RBP	0.39	□□□□□ -2.35
CBWD5-231	ENST00000495615	KMT2D	O14686	5537 aa		0.39	□□□□□ -2.35
CBWD5-231	ENST00000495615	KLF7	O75840	302 aa	Predicted RBP	0.39	□□□□□ -2.35
CBWD5-231	ENST00000495615	SERPINE1	P05121	402 aa		0.39	□□□□□ -2.35
CBWD5-231	ENST00000495615	SRP14	P37108	136 aa	Known RBP	0.39	□□□□□ -2.35
CBWD5-231	ENST00000495615	DEFA3	P59666	94 aa		0.39	□□□□□ -2.35
CBWD5-231	ENST00000495615	EDDM3A	Q14507	147 aa		0.39	□□□□□ -2.35
CBWD5-231	ENST00000495615	C12orf74	Q32Q52	190 aa		0.39	□□□□□ -2.35
CBWD5-231	ENST00000495615	SPINK9	Q5DT21	86 aa		0.39	□□□□□ -2.35
CBWD5-231	ENST00000495615		Q6Q795	121 aa		0.39	□□□□□ -2.35
CBWD5-231	ENST00000495615	SLC25A40	Q8TBP6	338 aa		0.39	□□□□□ -2.35
CBWD5-231	ENST00000495615	PRRT1	Q99946	306 aa		0.39	□□□□□ -2.35
CBWD5-231	ENST00000495615	PARVG	Q9HBI0	331 aa		0.39	□□□□□ -2.35
CBWD5-231	ENST00000495615	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	0.39	□□□□□ -2.35
CBWD5-231	ENST00000495615	UQCC1	Q9NVA1	299 aa		0.39	□□□□□ -2.35
CBWD5-231	ENST00000495615	UBAP1	Q9NZ09	502 aa		0.39	□□□□□ -2.35
CBWD5-231	ENST00000495615	PRELID3B	Q9Y3B1	194 aa		0.39	□□□□□ -2.35
CBWD5-231	ENST00000495615	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	0.39	□□□□□ -2.35
CBWD5-231	ENST00000495615	RTL1	A6NKG5	1358 aa		0.39	□□□□□ -2.35
CBWD5-231	ENST00000495615	HECW2	Q9P2P5	1572 aa		0.39	□□□□□ -2.35
CBWD5-231	ENST00000495615	MYO18A	Q92614	2054 aa	Known RBP	0.39	□□□□□ -2.35
CBWD5-231	ENST00000495615	HECW1	Q76N89	1606 aa		0.38	□□□□□ -2.35
CBWD5-231	ENST00000495615	TET1	Q8NFU7	2136 aa		0.38	□□□□□ -2.35
CBWD5-231	ENST00000495615	DST	Q03001	7570 aa	Known RBP	0.38	□□□□□ -2.35
CBWD5-231	ENST00000495615	SYNE2	Q8WXH0	6885 aa	Known RBP	0.38	□□□□□ -2.35
CBWD5-231	ENST00000495615	CASP8AP2	Q9UKL3	1982 aa		0.38	□□□□□ -2.35
CBWD5-231	ENST00000495615		A0A087WUJ7	227 aa		0.38	□□□□□ -2.35
CBWD5-231	ENST00000495615	TRGV10	A0A0A0MS01	117 aa		0.38	□□□□□ -2.35
CBWD5-231	ENST00000495615	SMIM9	A6NGZ8	99 aa		0.38	□□□□□ -2.35
CBWD5-231	ENST00000495615	PDE6D	O43924	150 aa		0.38	□□□□□ -2.35
CBWD5-231	ENST00000495615	HIST1H3A	P68431	136 aa		0.38	□□□□□ -2.35
CBWD5-231	ENST00000495615	H3F3A	P84243	136 aa		0.38	□□□□□ -2.35
CBWD5-231	ENST00000495615	SPA17	Q15506	151 aa		0.38	□□□□□ -2.35
CBWD5-231	ENST00000495615	HAGHL	Q6PII5	290 aa	Predicted RBP	0.38	□□□□□ -2.35
CBWD5-231	ENST00000495615	C12orf45	Q8N5I9	185 aa	Predicted RBP	0.38	□□□□□ -2.35
CBWD5-231	ENST00000495615	OR8J2	Q8NGG1	315 aa		0.38	□□□□□ -2.35
CBWD5-231	ENST00000495615	OR51A2	Q8NGJ7	313 aa		0.38	□□□□□ -2.35
CBWD5-231	ENST00000495615	ZNF431	Q8TF32	576 aa	Predicted RBP	0.38	□□□□□ -2.35
CBWD5-231	ENST00000495615	CANT1	Q8WVQ1	401 aa		0.38	□□□□□ -2.35
CBWD5-231	ENST00000495615	ADAT3	Q96EY9	351 aa	Predicted RBP	0.38	□□□□□ -2.35
CBWD5-231	ENST00000495615	SMR3A	Q99954	134 aa		0.38	□□□□□ -2.35

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms