RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 TMEM147Q9BVK8 224 aa12.98□□□□□ -0.33
HDAC6-235ENST00000495515 TMEM231Q9H6L2 316 aa12.98□□□□□ -0.33
HDAC6-235ENST00000495515 PFDN2Q9UHV9 154 aa12.98□□□□□ -0.33
HDAC6-235ENST00000495515 IGKV1OR2-108A0A075B7D4 117 aa12.97□□□□□ -0.33
HDAC6-235ENST00000495515 IGHV7-4-1A0A0J9YVY3 117 aa12.97□□□□□ -0.33
HDAC6-235ENST00000495515 A0A1W2PS18 150 aa12.97□□□□□ -0.33
HDAC6-235ENST00000495515 IL4P05112 153 aa12.97□□□□□ -0.33
HDAC6-235ENST00000495515 RPL12P30050 165 aaKnown RBP12.97□□□□□ -0.33
HDAC6-235ENST00000495515 NUP62P37198 522 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-235ENST00000495515 SELENOTP62341 195 aa12.97□□□□□ -0.33
HDAC6-235ENST00000495515 ZNF90Q03938 601 aa12.97□□□□□ -0.33
HDAC6-235ENST00000495515 DEFB114Q30KQ6 69 aa12.97□□□□□ -0.33
HDAC6-235ENST00000495515 LCN12Q6JVE5 192 aa12.97□□□□□ -0.33
HDAC6-235ENST00000495515 ADAMTSL5Q6ZMM2 481 aa12.97□□□□□ -0.33
HDAC6-235ENST00000495515 BPIFCQ8NFQ6 507 aa12.97□□□□□ -0.33
HDAC6-235ENST00000495515 OR2T35Q8NGX2 323 aa12.97□□□□□ -0.33
HDAC6-235ENST00000495515 ZNF414Q96IQ9 312 aa12.97□□□□□ -0.33
HDAC6-235ENST00000495515 SMPXQ9UHP9 88 aa12.97□□□□□ -0.33
HDAC6-235ENST00000495515 NHLH2Q02577 135 aa12.96□□□□□ -0.33
HDAC6-235ENST00000495515 OR2F1Q13607 317 aa12.96□□□□□ -0.33
HDAC6-235ENST00000495515 LAMTOR1Q6IAA8 161 aa12.96□□□□□ -0.33
HDAC6-235ENST00000495515 OR5C1Q8NGR4 320 aa12.96□□□□□ -0.33
HDAC6-235ENST00000495515 RNF125Q96EQ8 232 aa12.96□□□□□ -0.33
HDAC6-235ENST00000495515 RHPN1-AS1Q9BWJ2 59 aa12.96□□□□□ -0.33
HDAC6-235ENST00000495515 CD5P06127 495 aa12.95□□□□□ -0.34
HDAC6-235ENST00000495515 S100A7P31151 101 aa12.95□□□□□ -0.34
HDAC6-235ENST00000495515 VWC2Q2TAL6 325 aa12.95□□□□□ -0.34
HDAC6-235ENST00000495515 CD300EQ496F6 205 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-235ENST00000495515 BTNL8Q6UX41 500 aa12.95□□□□□ -0.34
HDAC6-235ENST00000495515 RBPMS2Q6ZRY4 209 aaKnown RBP12.95□□□□□ -0.34
HDAC6-235ENST00000495515 CYP2G1PQ6ZSU1 146 aa12.95□□□□□ -0.34
HDAC6-235ENST00000495515 GRAMD2BQ96HH9 432 aa12.95□□□□□ -0.34
HDAC6-235ENST00000495515 PBDC1Q9BVG4 233 aa12.95□□□□□ -0.34
HDAC6-235ENST00000495515 RABAC1Q9UI14 185 aa12.95□□□□□ -0.34
HDAC6-235ENST00000495515 ZNF256Q9Y2P7 627 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-235ENST00000495515 HSPB11Q9Y547 144 aa12.95□□□□□ -0.34
HDAC6-235ENST00000495515 TRAV25A0A0B4J276 109 aa12.94□□□□□ -0.34
HDAC6-235ENST00000495515 WI2-2373I1.2A0A1W2PRP0 233 aa12.94□□□□□ -0.34
HDAC6-235ENST00000495515 HNRNPCP07910 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
HDAC6-235ENST00000495515 EDN2P20800 178 aa12.94□□□□□ -0.34
HDAC6-235ENST00000495515 CRYBB3P26998 211 aa12.94□□□□□ -0.34
HDAC6-235ENST00000495515 LYZP61626 148 aa12.94□□□□□ -0.34
HDAC6-235ENST00000495515 ZNF546Q86UE3 836 aa12.94□□□□□ -0.34
HDAC6-235ENST00000495515 MLXQ9UH92 298 aa12.94□□□□□ -0.34
HDAC6-235ENST00000495515 WDR83OSQ9Y284 106 aa12.94□□□□□ -0.34
HDAC6-235ENST00000495515 LSM4Q9Y4Z0 139 aaKnown RBP12.94□□□□□ -0.34
HDAC6-235ENST00000495515 IGHV3-49A0A0A0MS15 119 aa12.93□□□□□ -0.34
HDAC6-235ENST00000495515 UBE2L5PA0A1B0GUS4 154 aa12.93□□□□□ -0.34
HDAC6-235ENST00000495515 CHEK1O14757 476 aa12.93□□□□□ -0.34
HDAC6-235ENST00000495515 MPDU1O75352 247 aa12.93□□□□□ -0.34
HDAC6-235ENST00000495515 DFFBO76075 338 aa12.93□□□□□ -0.34
HDAC6-235ENST00000495515 KRTAP10-11P60412 298 aa12.93□□□□□ -0.34
HDAC6-235ENST00000495515 CLINT1Q14677 625 aa12.93□□□□□ -0.34
HDAC6-235ENST00000495515 USF2Q15853 346 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-235ENST00000495515 S100A7AQ86SG5 101 aa12.93□□□□□ -0.34
HDAC6-235ENST00000495515 INO80EQ8NBZ0 244 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-235ENST00000495515 FXYD6-FXYD2A0A087WZ82 144 aa12.92□□□□□ -0.34
HDAC6-235ENST00000495515 AGPAT2O15120 278 aa12.92□□□□□ -0.34
HDAC6-235ENST00000495515 GP9P14770 177 aa12.92□□□□□ -0.34
HDAC6-235ENST00000495515 CAMLGP49069 296 aa12.92□□□□□ -0.34
HDAC6-235ENST00000495515 EIF2B2P49770 351 aaKnown RBP12.92□□□□□ -0.34
HDAC6-235ENST00000495515 PXDC1Q5TGL8 231 aa12.92□□□□□ -0.34
HDAC6-235ENST00000495515 CHAC2Q8WUX2 184 aa12.92□□□□□ -0.34
HDAC6-235ENST00000495515 PPP1R14BQ96C90 147 aa12.92□□□□□ -0.34
HDAC6-235ENST00000495515 ATP5SQ99766 215 aa12.92□□□□□ -0.34
HDAC6-235ENST00000495515 VSIRQ9H7M9 311 aa12.92□□□□□ -0.34
HDAC6-235ENST00000495515 SLC45A2Q9UMX9 530 aa12.92□□□□□ -0.34
HDAC6-235ENST00000495515 IGHV3OR16-13A0A075B7E8 117 aa12.91□□□□□ -0.34
HDAC6-235ENST00000495515 IGHV3-74A0A0B4J1X5 117 aa12.91□□□□□ -0.34
HDAC6-235ENST00000495515 IFNA5P01569 189 aa12.91□□□□□ -0.34
HDAC6-235ENST00000495515 LINC00869P0C866 280 aa12.91□□□□□ -0.34
HDAC6-235ENST00000495515 GUCA2BQ16661 112 aa12.91□□□□□ -0.34
HDAC6-235ENST00000495515 Q5BKY6 102 aa12.91□□□□□ -0.34
HDAC6-235ENST00000495515 TMEM61Q8N0U2 210 aa12.91□□□□□ -0.34
HDAC6-235ENST00000495515 ST8SIA2Q92186 375 aa12.91□□□□□ -0.34
HDAC6-235ENST00000495515 AQP10Q96PS8 301 aa12.91□□□□□ -0.34
HDAC6-235ENST00000495515 MGST2Q99735 147 aa12.91□□□□□ -0.34
HDAC6-235ENST00000495515 NOTCH1P46531 2555 aa12.91□□□□□ -0.34
HDAC6-235ENST00000495515 ORM2P19652 201 aa12.9□□□□□ -0.34
HDAC6-235ENST00000495515 FGF7P21781 194 aa12.9□□□□□ -0.34
HDAC6-235ENST00000495515 GATA2P23769 480 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-235ENST00000495515 DEFA6Q01524 100 aa12.9□□□□□ -0.34
HDAC6-235ENST00000495515 Q6ZRG5 221 aa12.9□□□□□ -0.34
HDAC6-235ENST00000495515 OR1B1Q8NGR6 318 aa12.9□□□□□ -0.34
HDAC6-235ENST00000495515 RNF2Q99496 336 aa12.9□□□□□ -0.34
HDAC6-235ENST00000495515 KCNIP2Q9NS61 270 aa12.9□□□□□ -0.34
HDAC6-235ENST00000495515 AURKAIP1Q9NWT8 199 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-235ENST00000495515 U3KQE9 123 aa12.9□□□□□ -0.34
HDAC6-235ENST00000495515 IGHV3-66A0A0C4DH42 116 aa12.89□□□□□ -0.35
HDAC6-235ENST00000495515 IZUMO1RA6ND01 250 aa12.89□□□□□ -0.35
HDAC6-235ENST00000495515 HELTA6NFD8 242 aa12.89□□□□□ -0.35
HDAC6-235ENST00000495515 TSPAN4O14817 238 aa12.89□□□□□ -0.35
HDAC6-235ENST00000495515 HYPMO75409 117 aa12.89□□□□□ -0.35
HDAC6-235ENST00000495515 APOHP02749 345 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-235ENST00000495515 AP2S1P53680 142 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-235ENST00000495515 PLP1P60201 277 aa12.89□□□□□ -0.35
HDAC6-235ENST00000495515 PAFAH1B2P68402 229 aa12.89□□□□□ -0.35
HDAC6-235ENST00000495515 TMEM182Q6ZP80 229 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-235ENST00000495515 TCF24Q7RTU0 167 aa12.89□□□□□ -0.35
HDAC6-235ENST00000495515 GTSCR1Q86UQ5 136 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms