RNA–Protein interactions for RNA: ENST00000495190.1

VPS8-226, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 756 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-226ENST00000495190 FGF8P55075 233 aaPredicted RBP3.55□□□□□ -1.84
VPS8-226ENST00000495190 RHOBP62745 196 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 GRB2P62993 217 aaKnown RBP3.55□□□□□ -1.84
VPS8-226ENST00000495190 KISS1Q15726 138 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 ZNF726P1Q15940 193 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 HLA-DRB5Q30154 266 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 HNRNPA1L2Q32P51 320 aaKnown RBP3.55□□□□□ -1.84
VPS8-226ENST00000495190 SMIM21Q3B7S5 101 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 TDRG1Q3Y452 100 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 SPIN3Q5JUX0 258 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 C1orf185Q5T7R7 199 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 FAM78BQ5VT40 261 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 RAET1LQ5VY80 246 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 TMEM215Q68D42 235 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 LCN15Q6UWW0 184 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 C12orf54Q6X4T0 127 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 BHLHA15Q7RTS1 189 aaPredicted RBP3.55□□□□□ -1.84
VPS8-226ENST00000495190 H2BFWTQ7Z2G1 175 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 BAGE3Q86Y29 109 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 BAGE2Q86Y30 109 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 CALHM1Q8IU99 346 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 ZADH2Q8N4Q0 377 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 Q8N976 141 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 NECAP1Q8NC96 275 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 OR4P4Q8NGL7 312 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 OR51E1Q8TCB6 317 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 ZNF721Q8TF20 911 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 LSM10Q969L4 123 aaKnown RBP3.55□□□□□ -1.84
VPS8-226ENST00000495190 SAMD10Q9BYL1 202 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 UBE2ZQ9H832 354 aaPredicted RBP3.55□□□□□ -1.84
VPS8-226ENST00000495190 PATZ1Q9HBE1 687 aaKnown RBP3.55□□□□□ -1.84
VPS8-226ENST00000495190 SMPXQ9UHP9 88 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 PRO0461Q9UI25 63 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 MCTS1Q9ULC4 181 aaKnown RBP3.55□□□□□ -1.84
VPS8-226ENST00000495190 SLC17A4Q9Y2C5 497 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 POLR1DQ9Y2S0 133 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 COL4A2P08572 1712 aa3.55□□□□□ -1.84
VPS8-226ENST00000495190 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.54□□□□□ -1.84
VPS8-226ENST00000495190 TMED7-TICAM2A0A0A6YYA0 188 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 H0Y980 276 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 H0YGG7 62 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 SSSCA1O60232 199 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 CST7O76096 145 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 S1PR2O95136 353 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 TMEM50AO95807 157 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 TNFP01375 233 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 IGLV2-23P01705 113 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 HLA-DRB1P01911 266 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 LINC00869P0C866 280 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 SMIM17P0DL12 118 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 CYBAP13498 195 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 KITLGP21583 273 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 NMUP48645 174 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 ZNF121P58317 390 aaPredicted RBP3.54□□□□□ -1.84
VPS8-226ENST00000495190 ARG2P78540 354 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 RUNX1Q01196 453 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 FAM53BQ14153 422 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 HIST3H3Q16695 136 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 C6orf226Q5I0X4 101 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 LDLRAD2Q5SZI1 272 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 STUMQ69YW2 141 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 LCN12Q6JVE5 192 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 MRPL54Q6P161 138 aaKnown RBP3.54□□□□□ -1.84
VPS8-226ENST00000495190 UNQ5815/PRO19632Q6UWF5 114 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 DEFB125Q8N687 156 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 OR10P1Q8NGE3 313 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 SGMS2Q8NHU3 365 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 PLPPR1Q8TBJ4 325 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 ABHD3Q8WU67 409 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 TMEM234Q8WY98 164 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 C11orf40Q8WZ69 217 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 REEP6Q96HR9 211 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 PMCHL2Q9BQD1 86 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 WDR61Q9GZS3 305 aaKnown RBP3.54□□□□□ -1.84
VPS8-226ENST00000495190 ST20Q9HBF5 79 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 TUBG2Q9NRH3 451 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 KCNIP2Q9NS61 270 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 IL36BQ9NZH7 164 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 DEC1Q9P2X7 70 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 CLN8Q9UBY8 286 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 NXT1Q9UKK6 140 aaKnown RBP3.54□□□□□ -1.84
VPS8-226ENST00000495190 KLK12Q9UKR0 248 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 PSG11Q9UQ72 335 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 FANCMQ8IYD8 2048 aa3.54□□□□□ -1.84
VPS8-226ENST00000495190 SCN3AQ9NY46 2000 aa3.53□□□□□ -1.84
VPS8-226ENST00000495190 IGKV1D-13A0A0B4J2D9 117 aa3.53□□□□□ -1.84
VPS8-226ENST00000495190 IGKV1-9A0A0C4DH69 117 aa3.53□□□□□ -1.84
VPS8-226ENST00000495190 A0A1B0GV72 72 aa3.53□□□□□ -1.84
VPS8-226ENST00000495190 MDFIC2A0A1B0GVS7 189 aa3.53□□□□□ -1.84
VPS8-226ENST00000495190 RBFOX2O43251 390 aaKnown RBP eCLIP3.53□□□□□ -1.84
VPS8-226ENST00000495190 SNAI2O43623 268 aa3.53□□□□□ -1.84
VPS8-226ENST00000495190 SYNGR2O43760 224 aa3.53□□□□□ -1.84
VPS8-226ENST00000495190 OR7C2O60412 319 aa3.53□□□□□ -1.84
VPS8-226ENST00000495190 SS18L1O75177 396 aaPredicted RBP3.53□□□□□ -1.84
VPS8-226ENST00000495190 PDCD6O75340 191 aa3.53□□□□□ -1.84
VPS8-226ENST00000495190 ZNF324O75467 553 aaPredicted RBP3.53□□□□□ -1.84
VPS8-226ENST00000495190 TRAPPC6AO75865 159 aa3.53□□□□□ -1.84
VPS8-226ENST00000495190 DHRS3O75911 302 aa3.53□□□□□ -1.84
VPS8-226ENST00000495190 MPZL1O95297 269 aa3.53□□□□□ -1.84
VPS8-226ENST00000495190 PPYP01298 95 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms