RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 IL22RA2Q969J5 263 aa15.88■□□□□ 0.13
HDDC3-203ENST00000494993 PRRT1Q99946 306 aa15.88■□□□□ 0.13
HDDC3-203ENST00000494993 HLA-DRB4X5D2U9 266 aa15.88■□□□□ 0.13
HDDC3-203ENST00000494993 DNAH17Q9UFH2 4485 aa15.88■□□□□ 0.13
HDDC3-203ENST00000494993 IFNA10P01566 189 aa15.87■□□□□ 0.13
HDDC3-203ENST00000494993 OR51G1Q8NGK1 321 aa15.87■□□□□ 0.13
HDDC3-203ENST00000494993 CTDSPLO15194 276 aa15.86■□□□□ 0.13
HDDC3-203ENST00000494993 NKX2-1P43699 371 aaPredicted RBP15.86■□□□□ 0.13
HDDC3-203ENST00000494993 LINC00336Q6ZUF6 198 aa15.86■□□□□ 0.13
HDDC3-203ENST00000494993 OR51S1Q8NGJ8 323 aa15.86■□□□□ 0.13
HDDC3-203ENST00000494993 RNF125Q96EQ8 232 aa15.86■□□□□ 0.13
HDDC3-203ENST00000494993 PRR13Q9NZ81 148 aa15.86■□□□□ 0.13
HDDC3-203ENST00000494993 HSPB7Q9UBY9 170 aa15.86■□□□□ 0.13
HDDC3-203ENST00000494993 KCNIP3Q9Y2W7 256 aa15.86■□□□□ 0.13
HDDC3-203ENST00000494993 U3KQ87 197 aa15.86■□□□□ 0.13
HDDC3-203ENST00000494993 DNAH2Q9P225 4427 aa15.86■□□□□ 0.13
HDDC3-203ENST00000494993 NUP62P37198 522 aaPredicted RBP15.85■□□□□ 0.13
HDDC3-203ENST00000494993 IL18Q14116 193 aa15.85■□□□□ 0.13
HDDC3-203ENST00000494993 CLVS1Q8IUQ0 354 aaPredicted RBP15.85■□□□□ 0.13
HDDC3-203ENST00000494993 DTD1Q8TEA8 209 aa15.85■□□□□ 0.13
HDDC3-203ENST00000494993 NEU1Q99519 415 aa15.85■□□□□ 0.13
HDDC3-203ENST00000494993 CCR6P51684 374 aa15.84■□□□□ 0.13
HDDC3-203ENST00000494993 KLF9Q13886 244 aaPredicted RBP15.84■□□□□ 0.13
HDDC3-203ENST00000494993 SMCO1Q147U7 214 aa15.84■□□□□ 0.13
HDDC3-203ENST00000494993 SPCS2Q15005 226 aa15.84■□□□□ 0.13
HDDC3-203ENST00000494993 OR8G2PQ6IF36 304 aa15.84■□□□□ 0.13
HDDC3-203ENST00000494993 ZNF705AQ6ZN79 300 aaPredicted RBP15.84■□□□□ 0.13
HDDC3-203ENST00000494993 LGI3Q8N145 548 aa15.84■□□□□ 0.13
HDDC3-203ENST00000494993 NDUFAF3Q9BU61 184 aa15.84■□□□□ 0.13
HDDC3-203ENST00000494993 PBDC1Q9BVG4 233 aa15.84■□□□□ 0.13
HDDC3-203ENST00000494993 SCRT1Q9BWW7 348 aa15.84■□□□□ 0.13
HDDC3-203ENST00000494993 RBKSQ9H477 322 aa15.84■□□□□ 0.13
HDDC3-203ENST00000494993 PCLOQ9Y6V0 5065 aa15.84■□□□□ 0.13
HDDC3-203ENST00000494993 A0A0B4J2A0 478 aa15.83■□□□□ 0.12
HDDC3-203ENST00000494993 ANKRD20A5PA0PJZ0 165 aa15.83■□□□□ 0.12
HDDC3-203ENST00000494993 P0DMU3 169 aa15.83■□□□□ 0.12
HDDC3-203ENST00000494993 FAM231AP0DMU4 169 aa15.83■□□□□ 0.12
HDDC3-203ENST00000494993 FAM231CP0DMU5 169 aa15.83■□□□□ 0.12
HDDC3-203ENST00000494993 GDF5OSQ5U4N7 250 aa15.83■□□□□ 0.12
HDDC3-203ENST00000494993 DIRAS2Q96HU8 199 aa15.83■□□□□ 0.12
HDDC3-203ENST00000494993 RABL2AQ9UBK7 228 aaPredicted RBP15.83■□□□□ 0.12
HDDC3-203ENST00000494993 SHPKQ9UHJ6 478 aa15.83■□□□□ 0.12
HDDC3-203ENST00000494993 PFDN2Q9UHV9 154 aa15.83■□□□□ 0.12
HDDC3-203ENST00000494993 RABL2BQ9UNT1 228 aa15.83■□□□□ 0.12
HDDC3-203ENST00000494993 PKHD1P08F94 4074 aa15.82■□□□□ 0.12
HDDC3-203ENST00000494993 ZNF705FA8MVS1 300 aaPredicted RBP15.82■□□□□ 0.12
HDDC3-203ENST00000494993 ZNF705DP0CH99 300 aaPredicted RBP15.82■□□□□ 0.12
HDDC3-203ENST00000494993 ZNF705BP0CI00 300 aaPredicted RBP15.82■□□□□ 0.12
HDDC3-203ENST00000494993 DEFB1P60022 68 aa15.82■□□□□ 0.12
HDDC3-203ENST00000494993 LYZL2Q7Z4W2 148 aa15.82■□□□□ 0.12
HDDC3-203ENST00000494993 GPR141Q7Z602 305 aa15.82■□□□□ 0.12
HDDC3-203ENST00000494993 POM121L12Q8N7R1 296 aa15.82■□□□□ 0.12
HDDC3-203ENST00000494993 SCGB3A2Q96PL1 93 aa15.82■□□□□ 0.12
HDDC3-203ENST00000494993 SCP2D1Q9UJQ7 156 aa15.82■□□□□ 0.12
HDDC3-203ENST00000494993 IGKV1D-37A0A075B6S9 117 aa15.81■□□□□ 0.12
HDDC3-203ENST00000494993 ZFP92A6NM28 416 aa15.81■□□□□ 0.12
HDDC3-203ENST00000494993 IGKV3-20P01619 116 aa15.81■□□□□ 0.12
HDDC3-203ENST00000494993 SUPT4H1P63272 117 aaKnown RBP15.81■□□□□ 0.12
HDDC3-203ENST00000494993 WDR12Q9GZL7 423 aaKnown RBP15.81■□□□□ 0.12
HDDC3-203ENST00000494993 SAV1Q9H4B6 383 aaPredicted RBP15.81■□□□□ 0.12
HDDC3-203ENST00000494993 TMEM189A5PLL7 270 aa15.8■□□□□ 0.12
HDDC3-203ENST00000494993 SMIM9A6NGZ8 99 aa15.8■□□□□ 0.12
HDDC3-203ENST00000494993 SPART-AS1P0CW21 52 aa15.8■□□□□ 0.12
HDDC3-203ENST00000494993 AKR1C4P17516 323 aa15.8■□□□□ 0.12
HDDC3-203ENST00000494993 GPX4P36969 197 aaPredicted RBP15.8■□□□□ 0.12
HDDC3-203ENST00000494993 ID1P41134 155 aa15.8■□□□□ 0.12
HDDC3-203ENST00000494993 ALDH3B2P48448 385 aa15.8■□□□□ 0.12
HDDC3-203ENST00000494993 ATP5IP56385 69 aaPredicted RBP15.8■□□□□ 0.12
HDDC3-203ENST00000494993 FXYD7P58549 80 aa15.8■□□□□ 0.12
HDDC3-203ENST00000494993 ZNF90Q03938 601 aa15.8■□□□□ 0.12
HDDC3-203ENST00000494993 GAMTQ14353 236 aa15.8■□□□□ 0.12
HDDC3-203ENST00000494993 FOXI2Q6ZQN5 318 aa15.8■□□□□ 0.12
HDDC3-203ENST00000494993 SLC35E1Q96K37 410 aa15.8■□□□□ 0.12
HDDC3-203ENST00000494993 LINC00052Q96N35 136 aa15.8■□□□□ 0.12
HDDC3-203ENST00000494993 MRPS26Q9BYN8 205 aaKnown RBP15.8■□□□□ 0.12
HDDC3-203ENST00000494993 A0A1B0GVY2 172 aa15.79■□□□□ 0.12
HDDC3-203ENST00000494993 PSMB3P49720 205 aa15.79■□□□□ 0.12
HDDC3-203ENST00000494993 C1orf194Q5T5A4 169 aa15.79■□□□□ 0.12
HDDC3-203ENST00000494993 CLUHP3Q96NS8 147 aa15.79■□□□□ 0.12
HDDC3-203ENST00000494993 CCDC59Q9P031 241 aaKnown RBP15.79■□□□□ 0.12
HDDC3-203ENST00000494993 IGHV3OR16-12A0A075B7B8 117 aa15.78■□□□□ 0.12
HDDC3-203ENST00000494993 SOCS3O14543 225 aa15.78■□□□□ 0.12
HDDC3-203ENST00000494993 EMP1P54849 157 aa15.78■□□□□ 0.12
HDDC3-203ENST00000494993 LYZP61626 148 aa15.78■□□□□ 0.12
HDDC3-203ENST00000494993 SRPXP78539 464 aa15.78■□□□□ 0.12
HDDC3-203ENST00000494993 ZNF709Q8N972 641 aa15.78■□□□□ 0.12
HDDC3-203ENST00000494993 OR1S1Q8NH92 325 aa15.78■□□□□ 0.12
HDDC3-203ENST00000494993 COQ8AQ8NI60 647 aa15.78■□□□□ 0.12
HDDC3-203ENST00000494993 MCUBQ9NWR8 336 aa15.78■□□□□ 0.12
HDDC3-203ENST00000494993 RFNGQ9Y644 331 aa15.78■□□□□ 0.12
HDDC3-203ENST00000494993 FABP1P07148 127 aa15.77■□□□□ 0.12
HDDC3-203ENST00000494993 ANXA3P12429 323 aa15.77■□□□□ 0.12
HDDC3-203ENST00000494993 OR4B1Q8NGF8 309 aa15.77■□□□□ 0.12
HDDC3-203ENST00000494993 DYNC2LI1Q8TCX1 351 aa15.77■□□□□ 0.12
HDDC3-203ENST00000494993 RSL24D1Q9UHA3 163 aaKnown RBP15.77■□□□□ 0.12
HDDC3-203ENST00000494993 NACAE9PAV3 2078 aa15.76■□□□□ 0.11
HDDC3-203ENST00000494993 ZNF79Q15937 498 aa15.76■□□□□ 0.11
HDDC3-203ENST00000494993 SPATA31B1PQ5VZV4 182 aa15.76■□□□□ 0.11
HDDC3-203ENST00000494993 TEX48A0A1B0GUV7 120 aa15.75■□□□□ 0.11
HDDC3-203ENST00000494993 SNRPGP15A8MWD9 76 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms