RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 CYTL1Q9NRR1 136 aa12.96□□□□□ -0.33
SNX17-209ENST00000494893 ZNF320A2RRD8 509 aa12.95□□□□□ -0.34
SNX17-209ENST00000494893 GP9P14770 177 aa12.95□□□□□ -0.34
SNX17-209ENST00000494893 CLINT1Q14677 625 aa12.95□□□□□ -0.34
SNX17-209ENST00000494893 SPSB3Q6PJ21 355 aa12.95□□□□□ -0.34
SNX17-209ENST00000494893 TMEM190Q8WZ59 177 aa12.95□□□□□ -0.34
SNX17-209ENST00000494893 TXN2Q99757 166 aa12.95□□□□□ -0.34
SNX17-209ENST00000494893 GGACTQ9BVM4 153 aa12.95□□□□□ -0.34
SNX17-209ENST00000494893 SELENOKQ9Y6D0 94 aa12.95□□□□□ -0.34
SNX17-209ENST00000494893 CORTO00230 105 aa12.94□□□□□ -0.34
SNX17-209ENST00000494893 DFFBO76075 338 aa12.94□□□□□ -0.34
SNX17-209ENST00000494893 CBLN1P23435 193 aa12.94□□□□□ -0.34
SNX17-209ENST00000494893 DLK1P80370 383 aa12.94□□□□□ -0.34
SNX17-209ENST00000494893 DEFB114Q30KQ6 69 aa12.94□□□□□ -0.34
SNX17-209ENST00000494893 DEFB121Q5J5C9 76 aa12.94□□□□□ -0.34
SNX17-209ENST00000494893 ATP5SQ99766 215 aa12.94□□□□□ -0.34
SNX17-209ENST00000494893 IGHV3OR16-8A0A075B7F1 116 aa12.93□□□□□ -0.34
SNX17-209ENST00000494893 C8orf88P0DMB2 117 aa12.93□□□□□ -0.34
SNX17-209ENST00000494893 GPX4P36969 197 aaPredicted RBP12.93□□□□□ -0.34
SNX17-209ENST00000494893 CD69Q07108 199 aa12.93□□□□□ -0.34
SNX17-209ENST00000494893 VWC2Q2TAL6 325 aa12.93□□□□□ -0.34
SNX17-209ENST00000494893 CD300EQ496F6 205 aaPredicted RBP12.93□□□□□ -0.34
SNX17-209ENST00000494893 Q8N1Y9 231 aa12.93□□□□□ -0.34
SNX17-209ENST00000494893 LILRB2Q8N423 598 aa12.93□□□□□ -0.34
SNX17-209ENST00000494893 TMEM147Q9BVK8 224 aa12.93□□□□□ -0.34
SNX17-209ENST00000494893 MLXQ9UH92 298 aa12.93□□□□□ -0.34
SNX17-209ENST00000494893 BORCS7-ASMTA0A0B4J1R7 106 aa12.92□□□□□ -0.34
SNX17-209ENST00000494893 FNDC10F2Z333 226 aa12.92□□□□□ -0.34
SNX17-209ENST00000494893 NDUFA4O00483 81 aa12.92□□□□□ -0.34
SNX17-209ENST00000494893 JTBO76095 146 aa12.92□□□□□ -0.34
SNX17-209ENST00000494893 ZNF266Q14584 549 aa12.92□□□□□ -0.34
SNX17-209ENST00000494893 RPL7L1Q6DKI1 246 aaKnown RBP12.92□□□□□ -0.34
SNX17-209ENST00000494893 ETFRF1Q6IPR1 90 aa12.92□□□□□ -0.34
SNX17-209ENST00000494893 SLC51BQ86UW2 128 aa12.92□□□□□ -0.34
SNX17-209ENST00000494893 ZNF471Q9BX82 626 aaPredicted RBP12.92□□□□□ -0.34
SNX17-209ENST00000494893 ZNF785A8K8V0 405 aa12.91□□□□□ -0.34
SNX17-209ENST00000494893 GNG7O60262 68 aa12.91□□□□□ -0.34
SNX17-209ENST00000494893 OPRK1P41145 380 aa12.91□□□□□ -0.34
SNX17-209ENST00000494893 ELLP55199 621 aaPredicted RBP12.91□□□□□ -0.34
SNX17-209ENST00000494893 SLC16A13Q7RTY0 426 aa12.91□□□□□ -0.34
SNX17-209ENST00000494893 STOML3Q8TAV4 291 aa12.91□□□□□ -0.34
SNX17-209ENST00000494893 UQCC1Q9NVA1 299 aa12.91□□□□□ -0.34
SNX17-209ENST00000494893 GAR1Q9NY12 217 aaKnown RBP12.91□□□□□ -0.34
SNX17-209ENST00000494893 RPS10-NUDT3A0A1W2PQS6 291 aa12.9□□□□□ -0.34
SNX17-209ENST00000494893 NUPL2O15504 423 aaKnown RBP12.9□□□□□ -0.34
SNX17-209ENST00000494893 ZNF207O43670 478 aaKnown RBP12.9□□□□□ -0.34
SNX17-209ENST00000494893 IFNA5P01569 189 aa12.9□□□□□ -0.34
SNX17-209ENST00000494893 NPBWR1P48145 328 aa12.9□□□□□ -0.34
SNX17-209ENST00000494893 EIF5AP63241 154 aaKnown RBP12.9□□□□□ -0.34
SNX17-209ENST00000494893 OR2K2Q8NGT1 345 aa12.9□□□□□ -0.34
SNX17-209ENST00000494893 OR4X1Q8NH49 305 aa12.9□□□□□ -0.34
SNX17-209ENST00000494893 PARD6GQ9BYG4 376 aaPredicted RBP12.9□□□□□ -0.34
SNX17-209ENST00000494893 ARV1Q9H2C2 271 aa12.9□□□□□ -0.34
SNX17-209ENST00000494893 UFC1Q9Y3C8 167 aa12.9□□□□□ -0.34
SNX17-209ENST00000494893 COL7A1Q02388 2944 aa12.89□□□□□ -0.35
SNX17-209ENST00000494893 SORL1Q92673 2214 aa12.89□□□□□ -0.35
SNX17-209ENST00000494893 CLN5O75503 358 aa12.89□□□□□ -0.35
SNX17-209ENST00000494893 IGKV1-17P01599 117 aa12.89□□□□□ -0.35
SNX17-209ENST00000494893 TPT1P13693 172 aaKnown RBP12.89□□□□□ -0.35
SNX17-209ENST00000494893 GAMTQ14353 236 aa12.89□□□□□ -0.35
SNX17-209ENST00000494893 LCN12Q6JVE5 192 aa12.89□□□□□ -0.35
SNX17-209ENST00000494893 BTNL8Q6UX41 500 aa12.89□□□□□ -0.35
SNX17-209ENST00000494893 TMEM61Q8N0U2 210 aa12.89□□□□□ -0.35
SNX17-209ENST00000494893 DYNLRB2Q8TF09 96 aa12.89□□□□□ -0.35
SNX17-209ENST00000494893 ST8SIA2Q92186 375 aa12.89□□□□□ -0.35
SNX17-209ENST00000494893 SLC35E1Q96K37 410 aa12.89□□□□□ -0.35
SNX17-209ENST00000494893 C20orf24Q9BUV8 137 aa12.89□□□□□ -0.35
SNX17-209ENST00000494893 ZFAND3Q9H8U3 227 aa12.89□□□□□ -0.35
SNX17-209ENST00000494893 NPVFQ9HCQ7 196 aa12.89□□□□□ -0.35
SNX17-209ENST00000494893 DAZ1Q9NQZ3 744 aaKnown RBP12.89□□□□□ -0.35
SNX17-209ENST00000494893 TECRQ9NZ01 308 aaKnown RBP12.89□□□□□ -0.35
SNX17-209ENST00000494893 MRPL27Q9P0M9 148 aaKnown RBP12.89□□□□□ -0.35
SNX17-209ENST00000494893 WDR83OSQ9Y284 106 aa12.89□□□□□ -0.35
SNX17-209ENST00000494893 UBE2L5PA0A1B0GUS4 154 aa12.88□□□□□ -0.35
SNX17-209ENST00000494893 SMCO3A2RU48 225 aa12.88□□□□□ -0.35
SNX17-209ENST00000494893 K7EMT4 169 aa12.88□□□□□ -0.35
SNX17-209ENST00000494893 RND2P52198 227 aa12.88□□□□□ -0.35
SNX17-209ENST00000494893 RELQ04864 619 aaPredicted RBP12.88□□□□□ -0.35
SNX17-209ENST00000494893 TOMM20LQ6UXN7 152 aa12.88□□□□□ -0.35
SNX17-209ENST00000494893 TMEM144Q7Z5S9 345 aa12.88□□□□□ -0.35
SNX17-209ENST00000494893 BAP18Q8IXM2 172 aa12.88□□□□□ -0.35
SNX17-209ENST00000494893 SCGB1C1Q8TD33 95 aa12.88□□□□□ -0.35
SNX17-209ENST00000494893 MARC2Q969Z3 335 aa12.88□□□□□ -0.35
SNX17-209ENST00000494893 B9D2Q9BPU9 175 aa12.88□□□□□ -0.35
SNX17-209ENST00000494893 GINS3Q9BRX5 216 aa12.88□□□□□ -0.35
SNX17-209ENST00000494893 WDR61Q9GZS3 305 aaKnown RBP12.88□□□□□ -0.35
SNX17-209ENST00000494893 AKR1C1Q04828 323 aa12.87□□□□□ -0.35
SNX17-209ENST00000494893 TIGITQ495A1 244 aa12.87□□□□□ -0.35
SNX17-209ENST00000494893 TMEM116Q8NCL8 245 aa12.87□□□□□ -0.35
SNX17-209ENST00000494893 SMAD5-AS1Q9Y6J3 95 aa12.87□□□□□ -0.35
SNX17-209ENST00000494893 IGLC1P0CG04 106 aa12.86□□□□□ -0.35
SNX17-209ENST00000494893 FGF7P21781 194 aa12.86□□□□□ -0.35
SNX17-209ENST00000494893 ZNF600Q6ZNG1 722 aa12.86□□□□□ -0.35
SNX17-209ENST00000494893 HSD17B11Q8NBQ5 300 aa12.86□□□□□ -0.35
SNX17-209ENST00000494893 ACY3Q96HD9 319 aa12.86□□□□□ -0.35
SNX17-209ENST00000494893 PUS1Q9Y606 427 aaKnown RBP eCLIP12.86□□□□□ -0.35
SNX17-209ENST00000494893 MPDU1O75352 247 aa12.85□□□□□ -0.35
SNX17-209ENST00000494893 YIF1AO95070 293 aa12.85□□□□□ -0.35
SNX17-209ENST00000494893 CFDP00746 253 aaPredicted RBP12.85□□□□□ -0.35
SNX17-209ENST00000494893 IFITM2Q01629 132 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms