RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 MAP6D1Q9H9H5 199 aa13.09□□□□□ -0.31
HDAC4-211ENST00000494800 RPL35AP18077 110 aaKnown RBP13.08□□□□□ -0.32
HDAC4-211ENST00000494800 USF2Q15853 346 aaPredicted RBP13.08□□□□□ -0.32
HDAC4-211ENST00000494800 IAH1Q2TAA2 248 aaPredicted RBP13.08□□□□□ -0.32
HDAC4-211ENST00000494800 RNF125Q96EQ8 232 aa13.08□□□□□ -0.32
HDAC4-211ENST00000494800 PBDC1Q9BVG4 233 aa13.08□□□□□ -0.32
HDAC4-211ENST00000494800 WDR12Q9GZL7 423 aaKnown RBP13.08□□□□□ -0.32
HDAC4-211ENST00000494800 NUDT15Q9NV35 164 aa13.08□□□□□ -0.32
HDAC4-211ENST00000494800 TP53TG1Q9Y2A0 90 aa13.08□□□□□ -0.32
HDAC4-211ENST00000494800 TRAV6A0A075B6T7 132 aa13.07□□□□□ -0.32
HDAC4-211ENST00000494800 FAM240BA0A1B0GVZ2 78 aa13.07□□□□□ -0.32
HDAC4-211ENST00000494800 A6NHS1 94 aa13.07□□□□□ -0.32
HDAC4-211ENST00000494800 MPTX1A8MV57 137 aa13.07□□□□□ -0.32
HDAC4-211ENST00000494800 SNRPGP15A8MWD9 76 aa13.07□□□□□ -0.32
HDAC4-211ENST00000494800 SSSCA1O60232 199 aa13.07□□□□□ -0.32
HDAC4-211ENST00000494800 POLR2GP62487 172 aaKnown RBP eCLIP13.07□□□□□ -0.32
HDAC4-211ENST00000494800 ZNF846Q147U1 533 aa13.07□□□□□ -0.32
HDAC4-211ENST00000494800 OR8G2PQ6IF36 304 aa13.07□□□□□ -0.32
HDAC4-211ENST00000494800 C16orf54Q6UWD8 224 aa13.07□□□□□ -0.32
HDAC4-211ENST00000494800 OR4D5Q8NGN0 318 aa13.07□□□□□ -0.32
HDAC4-211ENST00000494800 PSENENQ9NZ42 101 aa13.07□□□□□ -0.32
HDAC4-211ENST00000494800 PTTG2Q9NZH5 202 aa13.07□□□□□ -0.32
HDAC4-211ENST00000494800 U3KQE9 123 aa13.07□□□□□ -0.32
HDAC4-211ENST00000494800 H3BP45 60 aa13.06□□□□□ -0.32
HDAC4-211ENST00000494800 SCGB1D2O95969 90 aa13.06□□□□□ -0.32
HDAC4-211ENST00000494800 CFDP00746 253 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-211ENST00000494800 DEFB131AP59861 70 aa13.06□□□□□ -0.32
HDAC4-211ENST00000494800 CASC10Q5T4H9 136 aa13.06□□□□□ -0.32
HDAC4-211ENST00000494800 TRGV9Q99603 122 aa13.06□□□□□ -0.32
HDAC4-211ENST00000494800 GSKIPQ9P0R6 139 aa13.06□□□□□ -0.32
HDAC4-211ENST00000494800 SPRY2O43597 315 aa13.05□□□□□ -0.32
HDAC4-211ENST00000494800 H2AFB2P0C5Z0 115 aa13.05□□□□□ -0.32
HDAC4-211ENST00000494800 S100A7P31151 101 aa13.05□□□□□ -0.32
HDAC4-211ENST00000494800 LYZP61626 148 aa13.05□□□□□ -0.32
HDAC4-211ENST00000494800 ZNF90Q03938 601 aa13.05□□□□□ -0.32
HDAC4-211ENST00000494800 AKR1C1Q04828 323 aa13.05□□□□□ -0.32
HDAC4-211ENST00000494800 ZBTB8BQ8NAP8 495 aaPredicted RBP13.05□□□□□ -0.32
HDAC4-211ENST00000494800 ZNF431Q8TF32 576 aaPredicted RBP13.05□□□□□ -0.32
HDAC4-211ENST00000494800 GLMPQ8WWB7 406 aa13.05□□□□□ -0.32
HDAC4-211ENST00000494800 PPP1R14BQ96C90 147 aa13.05□□□□□ -0.32
HDAC4-211ENST00000494800 SMIM8Q96KF7 97 aa13.05□□□□□ -0.32
HDAC4-211ENST00000494800 RAB40CQ96S21 281 aa13.05□□□□□ -0.32
HDAC4-211ENST00000494800 OVOL2Q9BRP0 275 aa13.05□□□□□ -0.32
HDAC4-211ENST00000494800 CSTL1Q9H114 145 aa13.05□□□□□ -0.32
HDAC4-211ENST00000494800 IGKV1D-37A0A075B6S9 117 aa13.04□□□□□ -0.32
HDAC4-211ENST00000494800 K7EQG2 157 aa13.04□□□□□ -0.32
HDAC4-211ENST00000494800 BUB3O43684 328 aa13.04□□□□□ -0.32
HDAC4-211ENST00000494800 DEFB135Q30KP9 77 aa13.04□□□□□ -0.32
HDAC4-211ENST00000494800 SIGLEC15Q6ZMC9 328 aa13.04□□□□□ -0.32
HDAC4-211ENST00000494800 STHQ8IWL8 128 aa13.04□□□□□ -0.32
HDAC4-211ENST00000494800 THAP8Q8NA92 274 aa13.04□□□□□ -0.32
HDAC4-211ENST00000494800 BATF3Q9NR55 127 aa13.04□□□□□ -0.32
HDAC4-211ENST00000494800 FBXL17Q9UF56 701 aa13.04□□□□□ -0.32
HDAC4-211ENST00000494800 SMCO3A2RU48 225 aa13.03□□□□□ -0.32
HDAC4-211ENST00000494800 FAM25EA8MYX2 175 aa13.03□□□□□ -0.32
HDAC4-211ENST00000494800 TAS2R30P59541 319 aa13.03□□□□□ -0.32
HDAC4-211ENST00000494800 SNRPD3P62318 126 aaKnown RBP13.03□□□□□ -0.32
HDAC4-211ENST00000494800 ASAH1Q13510 395 aa13.03□□□□□ -0.32
HDAC4-211ENST00000494800 OR2F1Q13607 317 aa13.03□□□□□ -0.32
HDAC4-211ENST00000494800 ZNF124Q15973 351 aa13.03□□□□□ -0.32
HDAC4-211ENST00000494800 LEMD1Q68G75 181 aa13.03□□□□□ -0.32
HDAC4-211ENST00000494800 ACOT7LQ6ZUV0 252 aa13.03□□□□□ -0.32
HDAC4-211ENST00000494800 ENKURQ8TC29 256 aa13.03□□□□□ -0.32
HDAC4-211ENST00000494800 DCANP1Q8TF63 244 aa13.03□□□□□ -0.32
HDAC4-211ENST00000494800 NRN1Q9NPD7 142 aa13.03□□□□□ -0.32
HDAC4-211ENST00000494800 C5orf51A6NDU8 294 aa13.02□□□□□ -0.33
HDAC4-211ENST00000494800 PRSS46E5RG02 174 aa13.02□□□□□ -0.33
HDAC4-211ENST00000494800 ZNF688P0C7X2 276 aa13.02□□□□□ -0.33
HDAC4-211ENST00000494800 C1orf194Q5T5A4 169 aa13.02□□□□□ -0.33
HDAC4-211ENST00000494800 ZFAND6Q6FIF0 208 aa13.02□□□□□ -0.33
HDAC4-211ENST00000494800 C12orf45Q8N5I9 185 aaPredicted RBP13.02□□□□□ -0.33
HDAC4-211ENST00000494800 FAM24BQ8N5W8 94 aa13.02□□□□□ -0.33
HDAC4-211ENST00000494800 BPIFCQ8NFQ6 507 aa13.02□□□□□ -0.33
HDAC4-211ENST00000494800 RNF183Q96D59 192 aa13.02□□□□□ -0.33
HDAC4-211ENST00000494800 NBEAL2Q6ZNJ1 2754 aa13.02□□□□□ -0.33
HDAC4-211ENST00000494800 L7N2F9 121 aa13.01□□□□□ -0.33
HDAC4-211ENST00000494800 TSC22D2O75157 780 aa13.01□□□□□ -0.33
HDAC4-211ENST00000494800 UPK1BO75841 260 aa13.01□□□□□ -0.33
HDAC4-211ENST00000494800 VAMP2P63027 116 aa13.01□□□□□ -0.33
HDAC4-211ENST00000494800 OR10P1Q8NGE3 313 aa13.01□□□□□ -0.33
HDAC4-211ENST00000494800 SEC22CQ9BRL7 303 aa13.01□□□□□ -0.33
HDAC4-211ENST00000494800 SEPSECSQ9HD40 501 aaKnown RBP13.01□□□□□ -0.33
HDAC4-211ENST00000494800 MGAT4CQ9UBM8 478 aa13.01□□□□□ -0.33
HDAC4-211ENST00000494800 TBC1D24Q9ULP9 559 aa13.01□□□□□ -0.33
HDAC4-211ENST00000494800 IGKV1OR2-108A0A075B7D4 117 aa13□□□□□ -0.33
HDAC4-211ENST00000494800 CCSO14618 274 aa13□□□□□ -0.33
HDAC4-211ENST00000494800 PSMG4Q5JS54 123 aa13□□□□□ -0.33
HDAC4-211ENST00000494800 TMEM144Q7Z5S9 345 aa13□□□□□ -0.33
HDAC4-211ENST00000494800 TMEM217Q8N7C4 229 aa13□□□□□ -0.33
HDAC4-211ENST00000494800 GATAD1Q8WUU5 269 aa13□□□□□ -0.33
HDAC4-211ENST00000494800 GPN1Q9HCN4 374 aaPredicted RBP13□□□□□ -0.33
HDAC4-211ENST00000494800 SLC45A2Q9UMX9 530 aa13□□□□□ -0.33
HDAC4-211ENST00000494800 CA1P00915 261 aaPredicted RBP12.99□□□□□ -0.33
HDAC4-211ENST00000494800 MBPP02686 304 aaPredicted RBP12.99□□□□□ -0.33
HDAC4-211ENST00000494800 METTL15P1P0C7V9 234 aa12.99□□□□□ -0.33
HDAC4-211ENST00000494800 PVALBP20472 110 aaPredicted RBP12.99□□□□□ -0.33
HDAC4-211ENST00000494800 DLK1P80370 383 aa12.99□□□□□ -0.33
HDAC4-211ENST00000494800 TMEM41BQ5BJD5 291 aa12.99□□□□□ -0.33
HDAC4-211ENST00000494800 SAMD13Q5VXD3 122 aa12.99□□□□□ -0.33
HDAC4-211ENST00000494800 TMEM14EPQ6UXP3 125 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms