RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 RABL2AQ9UBK7 228 aaPredicted RBP16.73■□□□□ 0.27
COL27A1-208ENST00000494780 RABL2BQ9UNT1 228 aa16.73■□□□□ 0.27
COL27A1-208ENST00000494780 U3KQ87 197 aa16.73■□□□□ 0.27
COL27A1-208ENST00000494780 DEFB131BA0A096LNP1 70 aa16.72■□□□□ 0.27
COL27A1-208ENST00000494780 HLA-DRB4P13762 266 aa16.72■□□□□ 0.27
COL27A1-208ENST00000494780 NUP62P37198 522 aaPredicted RBP16.72■□□□□ 0.27
COL27A1-208ENST00000494780 NKX2-1P43699 371 aaPredicted RBP16.72■□□□□ 0.27
COL27A1-208ENST00000494780 OR51S1Q8NGJ8 323 aa16.72■□□□□ 0.27
COL27A1-208ENST00000494780 HLA-DRB4X5D2U9 266 aa16.72■□□□□ 0.27
COL27A1-208ENST00000494780 CCR6P51684 374 aa16.71■□□□□ 0.27
COL27A1-208ENST00000494780 IL18Q14116 193 aa16.71■□□□□ 0.27
COL27A1-208ENST00000494780 CLVS1Q8IUQ0 354 aaPredicted RBP16.71■□□□□ 0.27
COL27A1-208ENST00000494780 OR51G1Q8NGK1 321 aa16.71■□□□□ 0.27
COL27A1-208ENST00000494780 RNF125Q96EQ8 232 aa16.71■□□□□ 0.27
COL27A1-208ENST00000494780 HSPB7Q9UBY9 170 aa16.71■□□□□ 0.27
COL27A1-208ENST00000494780 PFDN2Q9UHV9 154 aa16.71■□□□□ 0.27
COL27A1-208ENST00000494780 KLF9Q13886 244 aaPredicted RBP16.7■□□□□ 0.26
COL27A1-208ENST00000494780 LINC00336Q6ZUF6 198 aa16.7■□□□□ 0.26
COL27A1-208ENST00000494780 LGI3Q8N145 548 aa16.7■□□□□ 0.26
COL27A1-208ENST00000494780 DTD1Q8TEA8 209 aa16.7■□□□□ 0.26
COL27A1-208ENST00000494780 DIRAS2Q96HU8 199 aa16.7■□□□□ 0.26
COL27A1-208ENST00000494780 SCGB3A2Q96PL1 93 aa16.7■□□□□ 0.26
COL27A1-208ENST00000494780 NEU1Q99519 415 aa16.7■□□□□ 0.26
COL27A1-208ENST00000494780 A0A0B4J2A0 478 aa16.69■□□□□ 0.26
COL27A1-208ENST00000494780 ATP5IP56385 69 aaPredicted RBP16.69■□□□□ 0.26
COL27A1-208ENST00000494780 SMCO1Q147U7 214 aa16.69■□□□□ 0.26
COL27A1-208ENST00000494780 SPCS2Q15005 226 aa16.69■□□□□ 0.26
COL27A1-208ENST00000494780 OR8G2PQ6IF36 304 aa16.69■□□□□ 0.26
COL27A1-208ENST00000494780 ZNF705AQ6ZN79 300 aaPredicted RBP16.69■□□□□ 0.26
COL27A1-208ENST00000494780 ZNF767PQ75MW2 155 aa16.69■□□□□ 0.26
COL27A1-208ENST00000494780 GPR141Q7Z602 305 aa16.69■□□□□ 0.26
COL27A1-208ENST00000494780 PRR13Q9NZ81 148 aa16.69■□□□□ 0.26
COL27A1-208ENST00000494780 SHPKQ9UHJ6 478 aa16.69■□□□□ 0.26
COL27A1-208ENST00000494780 SCP2D1Q9UJQ7 156 aa16.69■□□□□ 0.26
COL27A1-208ENST00000494780 ANKRD20A5PA0PJZ0 165 aa16.68■□□□□ 0.26
COL27A1-208ENST00000494780 NDUFAF3Q9BU61 184 aa16.68■□□□□ 0.26
COL27A1-208ENST00000494780 PBDC1Q9BVG4 233 aa16.68■□□□□ 0.26
COL27A1-208ENST00000494780 RBKSQ9H477 322 aa16.68■□□□□ 0.26
COL27A1-208ENST00000494780 P0DMU3 169 aa16.67■□□□□ 0.26
COL27A1-208ENST00000494780 FAM231AP0DMU4 169 aa16.67■□□□□ 0.26
COL27A1-208ENST00000494780 FAM231CP0DMU5 169 aa16.67■□□□□ 0.26
COL27A1-208ENST00000494780 GPX4P36969 197 aaPredicted RBP16.67■□□□□ 0.26
COL27A1-208ENST00000494780 POM121L12Q8N7R1 296 aa16.67■□□□□ 0.26
COL27A1-208ENST00000494780 MRPS26Q9BYN8 205 aaKnown RBP16.67■□□□□ 0.26
COL27A1-208ENST00000494780 TMEM189A5PLL7 270 aa16.66■□□□□ 0.26
COL27A1-208ENST00000494780 SMIM9A6NGZ8 99 aa16.66■□□□□ 0.26
COL27A1-208ENST00000494780 ZFP92A6NM28 416 aa16.66■□□□□ 0.26
COL27A1-208ENST00000494780 ZNF705FA8MVS1 300 aaPredicted RBP16.66■□□□□ 0.26
COL27A1-208ENST00000494780 ZNF705DP0CH99 300 aaPredicted RBP16.66■□□□□ 0.26
COL27A1-208ENST00000494780 ZNF705BP0CI00 300 aaPredicted RBP16.66■□□□□ 0.26
COL27A1-208ENST00000494780 ID1P41134 155 aa16.66■□□□□ 0.26
COL27A1-208ENST00000494780 ALDH3B2P48448 385 aa16.66■□□□□ 0.26
COL27A1-208ENST00000494780 LYZL2Q7Z4W2 148 aa16.66■□□□□ 0.26
COL27A1-208ENST00000494780 SLC35E1Q96K37 410 aa16.66■□□□□ 0.26
COL27A1-208ENST00000494780 SAV1Q9H4B6 383 aaPredicted RBP16.66■□□□□ 0.26
COL27A1-208ENST00000494780 SPART-AS1P0CW21 52 aa16.65■□□□□ 0.26
COL27A1-208ENST00000494780 AKR1C4P17516 323 aa16.65■□□□□ 0.26
COL27A1-208ENST00000494780 SUPT4H1P63272 117 aaKnown RBP16.65■□□□□ 0.26
COL27A1-208ENST00000494780 SRPXP78539 464 aa16.65■□□□□ 0.26
COL27A1-208ENST00000494780 GAMTQ14353 236 aa16.65■□□□□ 0.26
COL27A1-208ENST00000494780 C1orf194Q5T5A4 169 aa16.65■□□□□ 0.26
COL27A1-208ENST00000494780 GDF5OSQ5U4N7 250 aa16.65■□□□□ 0.26
COL27A1-208ENST00000494780 FOXI2Q6ZQN5 318 aa16.65■□□□□ 0.26
COL27A1-208ENST00000494780 CLUHP3Q96NS8 147 aa16.65■□□□□ 0.26
COL27A1-208ENST00000494780 CCDC59Q9P031 241 aaKnown RBP16.65■□□□□ 0.26
COL27A1-208ENST00000494780 RSL24D1Q9UHA3 163 aaKnown RBP16.65■□□□□ 0.26
COL27A1-208ENST00000494780 IGKV1D-37A0A075B6S9 117 aa16.64■□□□□ 0.25
COL27A1-208ENST00000494780 FABP1P07148 127 aa16.64■□□□□ 0.25
COL27A1-208ENST00000494780 ANXA3P12429 323 aa16.64■□□□□ 0.25
COL27A1-208ENST00000494780 PSMB3P49720 205 aa16.64■□□□□ 0.25
COL27A1-208ENST00000494780 ZNF90Q03938 601 aa16.64■□□□□ 0.25
COL27A1-208ENST00000494780 LINC00052Q96N35 136 aa16.64■□□□□ 0.25
COL27A1-208ENST00000494780 SCRT1Q9BWW7 348 aa16.64■□□□□ 0.25
COL27A1-208ENST00000494780 WDR12Q9GZL7 423 aaKnown RBP16.64■□□□□ 0.25
COL27A1-208ENST00000494780 MCUBQ9NWR8 336 aa16.64■□□□□ 0.25
COL27A1-208ENST00000494780 PIGBOS1A0A0B4J2F0 54 aa16.63■□□□□ 0.25
COL27A1-208ENST00000494780 IGKV3-20P01619 116 aa16.63■□□□□ 0.25
COL27A1-208ENST00000494780 SPATA31B1PQ5VZV4 182 aa16.63■□□□□ 0.25
COL27A1-208ENST00000494780 OR1S1Q8NH92 325 aa16.63■□□□□ 0.25
COL27A1-208ENST00000494780 RFNGQ9Y644 331 aa16.63■□□□□ 0.25
COL27A1-208ENST00000494780 SNRPGP15A8MWD9 76 aa16.62■□□□□ 0.25
COL27A1-208ENST00000494780 SOCS3O14543 225 aa16.62■□□□□ 0.25
COL27A1-208ENST00000494780 DEFB1P60022 68 aa16.62■□□□□ 0.25
COL27A1-208ENST00000494780 LYZP61626 148 aa16.62■□□□□ 0.25
COL27A1-208ENST00000494780 COQ8AQ8NI60 647 aa16.62■□□□□ 0.25
COL27A1-208ENST00000494780 DYNC2LI1Q8TCX1 351 aa16.62■□□□□ 0.25
COL27A1-208ENST00000494780 TEX48A0A1B0GUV7 120 aa16.61■□□□□ 0.25
COL27A1-208ENST00000494780 EMP1P54849 157 aa16.61■□□□□ 0.25
COL27A1-208ENST00000494780 FXYD7P58549 80 aa16.61■□□□□ 0.25
COL27A1-208ENST00000494780 ZNF709Q8N972 641 aa16.61■□□□□ 0.25
COL27A1-208ENST00000494780 RAB2BQ8WUD1 216 aa16.61■□□□□ 0.25
COL27A1-208ENST00000494780 FAM210BQ96KR6 192 aa16.61■□□□□ 0.25
COL27A1-208ENST00000494780 TRGV9Q99603 122 aa16.61■□□□□ 0.25
COL27A1-208ENST00000494780 IGHV3OR16-12A0A075B7B8 117 aa16.6■□□□□ 0.25
COL27A1-208ENST00000494780 A0A1B0GVY2 172 aa16.6■□□□□ 0.25
COL27A1-208ENST00000494780 ZNF79Q15937 498 aa16.6■□□□□ 0.25
COL27A1-208ENST00000494780 OR4B1Q8NGF8 309 aa16.6■□□□□ 0.25
COL27A1-208ENST00000494780 BCL7BQ9BQE9 202 aa16.6■□□□□ 0.25
COL27A1-208ENST00000494780 DUXBA0A1W2PPF3 345 aa16.59■□□□□ 0.25
COL27A1-208ENST00000494780 ISLRO14498 428 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms