RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 HELTA6NFD8 242 aa8.42□□□□□ -1.06
VTI1A-208ENST00000494728 BUB3O43684 328 aa8.42□□□□□ -1.06
VTI1A-208ENST00000494728 NOL3O60936 208 aaKnown RBP8.42□□□□□ -1.06
VTI1A-208ENST00000494728 ZNF90Q03938 601 aa8.42□□□□□ -1.06
VTI1A-208ENST00000494728 SMCO1Q147U7 214 aa8.42□□□□□ -1.06
VTI1A-208ENST00000494728 GDF5OSQ5U4N7 250 aa8.42□□□□□ -1.06
VTI1A-208ENST00000494728 LGALS9CQ6DKI2 356 aa8.42□□□□□ -1.06
VTI1A-208ENST00000494728 OR51G1Q8NGK1 321 aa8.42□□□□□ -1.06
VTI1A-208ENST00000494728 MCFD2Q8NI22 146 aa8.42□□□□□ -1.06
VTI1A-208ENST00000494728 DTD1Q8TEA8 209 aa8.42□□□□□ -1.06
VTI1A-208ENST00000494728 Q8WTZ3 238 aa8.42□□□□□ -1.06
VTI1A-208ENST00000494728 SCRT1Q9BWW7 348 aa8.42□□□□□ -1.06
VTI1A-208ENST00000494728 RSL24D1Q9UHA3 163 aaKnown RBP8.42□□□□□ -1.06
VTI1A-208ENST00000494728 SCP2D1Q9UJQ7 156 aa8.42□□□□□ -1.06
VTI1A-208ENST00000494728 IGKV1OR2-108A0A075B7D4 117 aa8.41□□□□□ -1.06
VTI1A-208ENST00000494728 FABP12A6NFH5 140 aa8.41□□□□□ -1.06
VTI1A-208ENST00000494728 PITX3O75364 302 aa8.41□□□□□ -1.06
VTI1A-208ENST00000494728 SCGB2A1O75556 95 aa8.41□□□□□ -1.06
VTI1A-208ENST00000494728 IFNA10P01566 189 aa8.41□□□□□ -1.06
VTI1A-208ENST00000494728 RD3LP0DJH9 198 aa8.41□□□□□ -1.06
VTI1A-208ENST00000494728 SPP1P10451 314 aa8.41□□□□□ -1.06
VTI1A-208ENST00000494728 CCR6P51684 374 aa8.41□□□□□ -1.06
VTI1A-208ENST00000494728 GAMTQ14353 236 aa8.41□□□□□ -1.06
VTI1A-208ENST00000494728 SIGLEC15Q6ZMC9 328 aa8.41□□□□□ -1.06
VTI1A-208ENST00000494728 Q6ZTC4 211 aa8.41□□□□□ -1.06
VTI1A-208ENST00000494728 TMED4Q7Z7H5 227 aa8.41□□□□□ -1.06
VTI1A-208ENST00000494728 LGI3Q8N145 548 aa8.41□□□□□ -1.06
VTI1A-208ENST00000494728 RNF125Q96EQ8 232 aa8.41□□□□□ -1.06
VTI1A-208ENST00000494728 NARS2Q96I59 477 aaKnown RBP8.41□□□□□ -1.06
VTI1A-208ENST00000494728 RAB40CQ96S21 281 aa8.41□□□□□ -1.06
VTI1A-208ENST00000494728 WDR12Q9GZL7 423 aaKnown RBP8.41□□□□□ -1.06
VTI1A-208ENST00000494728 MFFQ9GZY8 342 aa8.41□□□□□ -1.06
VTI1A-208ENST00000494728 NRN1Q9NPD7 142 aa8.41□□□□□ -1.06
VTI1A-208ENST00000494728 RABL2AQ9UBK7 228 aaPredicted RBP8.41□□□□□ -1.06
VTI1A-208ENST00000494728 RABL2BQ9UNT1 228 aa8.41□□□□□ -1.06
VTI1A-208ENST00000494728 KIAA1109Q2LD37 5005 aa8.41□□□□□ -1.06
VTI1A-208ENST00000494728 CCDC160A6NGH7 325 aa8.4□□□□□ -1.06
VTI1A-208ENST00000494728 LCE2BO14633 110 aa8.4□□□□□ -1.06
VTI1A-208ENST00000494728 IAPPP10997 89 aa8.4□□□□□ -1.06
VTI1A-208ENST00000494728 HLA-DMBP28068 263 aa8.4□□□□□ -1.06
VTI1A-208ENST00000494728 MORN3Q6PF18 240 aaPredicted RBP8.4□□□□□ -1.06
VTI1A-208ENST00000494728 ZNF767PQ75MW2 155 aa8.4□□□□□ -1.06
VTI1A-208ENST00000494728 C2CD4CQ8TF44 421 aa8.4□□□□□ -1.06
VTI1A-208ENST00000494728 PBDC1Q9BVG4 233 aa8.4□□□□□ -1.06
VTI1A-208ENST00000494728 APLNQ9ULZ1 77 aa8.4□□□□□ -1.06
VTI1A-208ENST00000494728 KCNIP3Q9Y2W7 256 aa8.4□□□□□ -1.06
VTI1A-208ENST00000494728 U3KQ87 197 aa8.4□□□□□ -1.06
VTI1A-208ENST00000494728 PRSS46E5RG02 174 aa8.39□□□□□ -1.07
VTI1A-208ENST00000494728 H3BMM0 161 aa8.39□□□□□ -1.07
VTI1A-208ENST00000494728 SOCS3O14543 225 aa8.39□□□□□ -1.07
VTI1A-208ENST00000494728 MIFP14174 115 aa8.39□□□□□ -1.07
VTI1A-208ENST00000494728 ETFRF1Q6IPR1 90 aa8.39□□□□□ -1.07
VTI1A-208ENST00000494728 OR1S1Q8NH92 325 aa8.39□□□□□ -1.07
VTI1A-208ENST00000494728 C17orf77Q96MU5 243 aa8.39□□□□□ -1.07
VTI1A-208ENST00000494728 HRH4Q9H3N8 390 aa8.39□□□□□ -1.07
VTI1A-208ENST00000494728 XCL2Q9UBD3 114 aa8.39□□□□□ -1.07
VTI1A-208ENST00000494728 TBC1D24Q9ULP9 559 aa8.39□□□□□ -1.07
VTI1A-208ENST00000494728 DYNC1H1Q14204 4646 aaKnown RBP8.38□□□□□ -1.07
VTI1A-208ENST00000494728 IGLL5B9A064 214 aa8.38□□□□□ -1.07
VTI1A-208ENST00000494728 IFNA4P05014 189 aa8.38□□□□□ -1.07
VTI1A-208ENST00000494728 HLA-DRB4P13762 266 aa8.38□□□□□ -1.07
VTI1A-208ENST00000494728 EIF2B2P49770 351 aaKnown RBP8.38□□□□□ -1.07
VTI1A-208ENST00000494728 LYZP61626 148 aa8.38□□□□□ -1.07
VTI1A-208ENST00000494728 PPP1R1AQ13522 171 aa8.38□□□□□ -1.07
VTI1A-208ENST00000494728 OR2F1Q13607 317 aa8.38□□□□□ -1.07
VTI1A-208ENST00000494728 PYDC2Q56P42 97 aa8.38□□□□□ -1.07
VTI1A-208ENST00000494728 MAGT1Q9H0U3 335 aa8.38□□□□□ -1.07
VTI1A-208ENST00000494728 RBM38Q9H0Z9 239 aaKnown RBP8.38□□□□□ -1.07
VTI1A-208ENST00000494728 HLA-DRB4X5D2U9 266 aa8.38□□□□□ -1.07
VTI1A-208ENST00000494728 DNAH11Q96DT5 4516 aa8.37□□□□□ -1.07
VTI1A-208ENST00000494728 ZFP92A6NM28 416 aa8.37□□□□□ -1.07
VTI1A-208ENST00000494728 F6UB75 175 aa8.37□□□□□ -1.07
VTI1A-208ENST00000494728 IGKV3-20P01619 116 aa8.37□□□□□ -1.07
VTI1A-208ENST00000494728 VAMP1P23763 118 aa8.37□□□□□ -1.07
VTI1A-208ENST00000494728 AP2S1P53680 142 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-208ENST00000494728 FXYD7P58549 80 aa8.37□□□□□ -1.07
VTI1A-208ENST00000494728 SRPXP78539 464 aa8.37□□□□□ -1.07
VTI1A-208ENST00000494728 TMEM41BQ5BJD5 291 aa8.37□□□□□ -1.07
VTI1A-208ENST00000494728 TMEM128Q5BJH2 165 aa8.37□□□□□ -1.07
VTI1A-208ENST00000494728 CCDC190Q86UF4 302 aa8.37□□□□□ -1.07
VTI1A-208ENST00000494728 NOXA1Q86UR1 476 aa8.37□□□□□ -1.07
VTI1A-208ENST00000494728 TOMM5Q8N4H5 51 aa8.37□□□□□ -1.07
VTI1A-208ENST00000494728 LRTM2Q8N967 370 aa8.37□□□□□ -1.07
VTI1A-208ENST00000494728 ZNF709Q8N972 641 aa8.37□□□□□ -1.07
VTI1A-208ENST00000494728 SLC35E1Q96K37 410 aa8.37□□□□□ -1.07
VTI1A-208ENST00000494728 SCGB3A2Q96PL1 93 aa8.37□□□□□ -1.07
VTI1A-208ENST00000494728 NACAE9PAV3 2078 aa8.37□□□□□ -1.07
VTI1A-208ENST00000494728 DUXBA0A1W2PPF3 345 aa8.36□□□□□ -1.07
VTI1A-208ENST00000494728 H3BP45 60 aa8.36□□□□□ -1.07
VTI1A-208ENST00000494728 ANXA3P12429 323 aa8.36□□□□□ -1.07
VTI1A-208ENST00000494728 GATA2P23769 480 aaPredicted RBP8.36□□□□□ -1.07
VTI1A-208ENST00000494728 GPX4P36969 197 aaPredicted RBP8.36□□□□□ -1.07
VTI1A-208ENST00000494728 SNRPD3P62318 126 aaKnown RBP8.36□□□□□ -1.07
VTI1A-208ENST00000494728 C12orf74Q32Q52 190 aa8.36□□□□□ -1.07
VTI1A-208ENST00000494728 OR8G2PQ6IF36 304 aa8.36□□□□□ -1.07
VTI1A-208ENST00000494728 TMEM182Q6ZP80 229 aaPredicted RBP8.36□□□□□ -1.07
VTI1A-208ENST00000494728 THAP8Q8NA92 274 aa8.36□□□□□ -1.07
VTI1A-208ENST00000494728 C20orf173Q96LM9 149 aa8.36□□□□□ -1.07
VTI1A-208ENST00000494728 CACFD1Q9UGQ2 172 aa8.36□□□□□ -1.07
VTI1A-208ENST00000494728 IGHV4-4A0A075B6R2 117 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms