RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 RNF125Q96EQ8 232 aa6.9□□□□□ -1.3
UBR4-216ENST00000494503 NIPSNAP3BQ9BS92 247 aa6.9□□□□□ -1.3
UBR4-216ENST00000494503 TMEM222Q9H0R3 208 aa6.9□□□□□ -1.3
UBR4-216ENST00000494503 NAA60Q9H7X0 242 aa6.9□□□□□ -1.3
UBR4-216ENST00000494503 PLA2G2EQ9NZK7 142 aa6.9□□□□□ -1.3
UBR4-216ENST00000494503 GOLT1BQ9Y3E0 138 aa6.9□□□□□ -1.3
UBR4-216ENST00000494503 TMED3Q9Y3Q3 217 aa6.9□□□□□ -1.3
UBR4-216ENST00000494503 RFNGQ9Y644 331 aa6.9□□□□□ -1.3
UBR4-216ENST00000494503 U3KQE9 123 aa6.9□□□□□ -1.3
UBR4-216ENST00000494503 DNAH6Q9C0G6 4158 aa6.9□□□□□ -1.31
UBR4-216ENST00000494503 TEX48A0A1B0GUV7 120 aa6.89□□□□□ -1.31
UBR4-216ENST00000494503 LOC102723971A0A1B0GUV8 181 aa6.89□□□□□ -1.31
UBR4-216ENST00000494503 DISC1C4P0D8 188 aa6.89□□□□□ -1.31
UBR4-216ENST00000494503 GABARAPH6UMI1 98 aa6.89□□□□□ -1.31
UBR4-216ENST00000494503 BUB3O43684 328 aa6.89□□□□□ -1.31
UBR4-216ENST00000494503 GABARAPO95166 117 aa6.89□□□□□ -1.31
UBR4-216ENST00000494503 HBE1P02100 147 aa6.89□□□□□ -1.31
UBR4-216ENST00000494503 NKX2-1P43699 371 aaPredicted RBP6.89□□□□□ -1.31
UBR4-216ENST00000494503 BSXQ3C1V8 233 aa6.89□□□□□ -1.31
UBR4-216ENST00000494503 EBLN2Q6P2I7 272 aa6.89□□□□□ -1.31
UBR4-216ENST00000494503 ZNF575Q86XF7 245 aa6.89□□□□□ -1.31
UBR4-216ENST00000494503 SELENOHQ8IZQ5 122 aaKnown RBP6.89□□□□□ -1.31
UBR4-216ENST00000494503 TMEM229BQ8NBD8 167 aa6.89□□□□□ -1.31
UBR4-216ENST00000494503 OR52E5Q8NH55 327 aa6.89□□□□□ -1.31
UBR4-216ENST00000494503 LHFPL5Q8TAF8 219 aa6.89□□□□□ -1.31
UBR4-216ENST00000494503 GPR146Q96CH1 333 aa6.89□□□□□ -1.31
UBR4-216ENST00000494503 SLC35E1Q96K37 410 aa6.89□□□□□ -1.31
UBR4-216ENST00000494503 ATG101Q9BSB4 218 aa6.89□□□□□ -1.31
UBR4-216ENST00000494503 MAGT1Q9H0U3 335 aa6.89□□□□□ -1.31
UBR4-216ENST00000494503 PRR13Q9NZ81 148 aa6.89□□□□□ -1.31
UBR4-216ENST00000494503 MTFP1Q9UDX5 166 aa6.89□□□□□ -1.31
UBR4-216ENST00000494503 PKHD1P08F94 4074 aa6.89□□□□□ -1.31
UBR4-216ENST00000494503 NACAE9PAV3 2078 aa6.88□□□□□ -1.31
UBR4-216ENST00000494503 SMIM9A6NGZ8 99 aa6.88□□□□□ -1.31
UBR4-216ENST00000494503 F6UB75 175 aa6.88□□□□□ -1.31
UBR4-216ENST00000494503 CDS2O95674 445 aa6.88□□□□□ -1.31
UBR4-216ENST00000494503 SULT1A3P0DMM9 295 aa6.88□□□□□ -1.31
UBR4-216ENST00000494503 SULT1A4P0DMN0 295 aa6.88□□□□□ -1.31
UBR4-216ENST00000494503 DAD1P61803 113 aa6.88□□□□□ -1.31
UBR4-216ENST00000494503 OR2F1Q13607 317 aa6.88□□□□□ -1.31
UBR4-216ENST00000494503 KLF9Q13886 244 aaPredicted RBP6.88□□□□□ -1.31
UBR4-216ENST00000494503 LGALS9BQ3B8N2 356 aa6.88□□□□□ -1.31
UBR4-216ENST00000494503 C1orf134Q5TEV5 83 aa6.88□□□□□ -1.31
UBR4-216ENST00000494503 GPR107Q5VW38 600 aa6.88□□□□□ -1.31
UBR4-216ENST00000494503 ZNF705AQ6ZN79 300 aaPredicted RBP6.88□□□□□ -1.31
UBR4-216ENST00000494503 FOXI2Q6ZQN5 318 aa6.88□□□□□ -1.31
UBR4-216ENST00000494503 OR8I2Q8N0Y5 310 aa6.88□□□□□ -1.31
UBR4-216ENST00000494503 LGI3Q8N145 548 aa6.88□□□□□ -1.31
UBR4-216ENST00000494503 GLYATL2Q8WU03 294 aa6.88□□□□□ -1.31
UBR4-216ENST00000494503 C15orf40Q8WUR7 153 aa6.88□□□□□ -1.31
UBR4-216ENST00000494503 ABHD1Q96SE0 405 aa6.88□□□□□ -1.31
UBR4-216ENST00000494503 WDR12Q9GZL7 423 aaKnown RBP6.88□□□□□ -1.31
UBR4-216ENST00000494503 SLC35B3Q9H1N7 401 aa6.88□□□□□ -1.31
UBR4-216ENST00000494503 SAV1Q9H4B6 383 aaPredicted RBP6.88□□□□□ -1.31
UBR4-216ENST00000494503 YTHDF2Q9Y5A9 579 aaKnown RBP6.88□□□□□ -1.31
UBR4-216ENST00000494503 ZNF705FA8MVS1 300 aaPredicted RBP6.87□□□□□ -1.31
UBR4-216ENST00000494503 FABP1P07148 127 aa6.87□□□□□ -1.31
UBR4-216ENST00000494503 ZNF705DP0CH99 300 aaPredicted RBP6.87□□□□□ -1.31
UBR4-216ENST00000494503 ZNF705BP0CI00 300 aaPredicted RBP6.87□□□□□ -1.31
UBR4-216ENST00000494503 ZNF182P17025 639 aaPredicted RBP6.87□□□□□ -1.31
UBR4-216ENST00000494503 PSMB3P49720 205 aa6.87□□□□□ -1.31
UBR4-216ENST00000494503 PSG9Q00887 426 aa6.87□□□□□ -1.31
UBR4-216ENST00000494503 ZNF90Q03938 601 aa6.87□□□□□ -1.31
UBR4-216ENST00000494503 RRN3P1Q2M238 152 aa6.87□□□□□ -1.31
UBR4-216ENST00000494503 FAM78BQ5VT40 261 aa6.87□□□□□ -1.31
UBR4-216ENST00000494503 TMEM88Q6PEY1 159 aa6.87□□□□□ -1.31
UBR4-216ENST00000494503 OR1S1Q8NH92 325 aa6.87□□□□□ -1.31
UBR4-216ENST00000494503 DTD1Q8TEA8 209 aa6.87□□□□□ -1.31
UBR4-216ENST00000494503 C16orf92Q96LL3 132 aa6.87□□□□□ -1.31
UBR4-216ENST00000494503 NEU1Q99519 415 aa6.87□□□□□ -1.31
UBR4-216ENST00000494503 SLC25A22Q9H936 323 aa6.87□□□□□ -1.31
UBR4-216ENST00000494503 SEPSECSQ9HD40 501 aaKnown RBP6.87□□□□□ -1.31
UBR4-216ENST00000494503 MCUBQ9NWR8 336 aa6.87□□□□□ -1.31
UBR4-216ENST00000494503 DKK2Q9UBU2 259 aa6.87□□□□□ -1.31
UBR4-216ENST00000494503 KCNIP3Q9Y2W7 256 aa6.87□□□□□ -1.31
UBR4-216ENST00000494503 CRYM-AS1A6NIL9 109 aa6.86□□□□□ -1.31
UBR4-216ENST00000494503 CD74P04233 296 aa6.86□□□□□ -1.31
UBR4-216ENST00000494503 AKAIN1P0CW23 69 aa6.86□□□□□ -1.31
UBR4-216ENST00000494503 AKR1C4P17516 323 aa6.86□□□□□ -1.31
UBR4-216ENST00000494503 IL18Q14116 193 aa6.86□□□□□ -1.31
UBR4-216ENST00000494503 NMSQ5H8A3 153 aa6.86□□□□□ -1.31
UBR4-216ENST00000494503 OR8G2PQ6IF36 304 aa6.86□□□□□ -1.31
UBR4-216ENST00000494503 CLVS1Q8IUQ0 354 aaPredicted RBP6.86□□□□□ -1.31
UBR4-216ENST00000494503 TMEM170AQ8WVE7 144 aa6.86□□□□□ -1.31
UBR4-216ENST00000494503 FAM210BQ96KR6 192 aa6.86□□□□□ -1.31
UBR4-216ENST00000494503 RTBDNQ9BSG5 229 aaPredicted RBP6.86□□□□□ -1.31
UBR4-216ENST00000494503 NAA50Q9GZZ1 169 aaKnown RBP6.86□□□□□ -1.31
UBR4-216ENST00000494503 RBKSQ9H477 322 aa6.86□□□□□ -1.31
UBR4-216ENST00000494503 RPRMQ9NS64 109 aa6.86□□□□□ -1.31
UBR4-216ENST00000494503 CACFD1Q9UGQ2 172 aa6.86□□□□□ -1.31
UBR4-216ENST00000494503 U3KQ87 197 aa6.86□□□□□ -1.31
UBR4-216ENST00000494503 SNRPGP15A8MWD9 76 aa6.85□□□□□ -1.31
UBR4-216ENST00000494503 C16orf90A8MZG2 172 aa6.85□□□□□ -1.31
UBR4-216ENST00000494503 NUDT3O95989 172 aa6.85□□□□□ -1.31
UBR4-216ENST00000494503 DEFB130BP0DP73 79 aa6.85□□□□□ -1.31
UBR4-216ENST00000494503 DEFB130AP0DP74 79 aa6.85□□□□□ -1.31
UBR4-216ENST00000494503 SUPT4H1P63272 117 aaKnown RBP6.85□□□□□ -1.31
UBR4-216ENST00000494503 FGL1Q08830 312 aa6.85□□□□□ -1.31
UBR4-216ENST00000494503 SMCO1Q147U7 214 aa6.85□□□□□ -1.31
UBR4-216ENST00000494503 SURF2Q15527 256 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms