RNA–Protein interactions for RNA: ENST00000493947.5

ZNF655-223, Transcript of zinc finger protein 655, human

TSL 4

Gene ZNF655, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF655-223	ENST00000493947	ETFRF1	Q6IPR1	90 aa		11.93	□□□□□ -0.5
ZNF655-223	ENST00000493947	PRRT1	Q99946	306 aa		11.93	□□□□□ -0.5
ZNF655-223	ENST00000493947	RNF126	Q9BV68	326 aa		11.93	□□□□□ -0.5
ZNF655-223	ENST00000493947	SCRT1	Q9BWW7	348 aa		11.93	□□□□□ -0.5
ZNF655-223	ENST00000493947	IGKV1D-37	A0A075B6S9	117 aa		11.92	□□□□□ -0.5
ZNF655-223	ENST00000493947	AMBP	P02760	352 aa		11.92	□□□□□ -0.5
ZNF655-223	ENST00000493947	HLA-DRB4	P13762	266 aa		11.92	□□□□□ -0.5
ZNF655-223	ENST00000493947	SNRPD3	P62318	126 aa	Known RBP	11.92	□□□□□ -0.5
ZNF655-223	ENST00000493947	GDF5OS	Q5U4N7	250 aa		11.92	□□□□□ -0.5
ZNF655-223	ENST00000493947	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.92	□□□□□ -0.5
ZNF655-223	ENST00000493947	ZNF767P	Q75MW2	155 aa		11.92	□□□□□ -0.5
ZNF655-223	ENST00000493947	OR51G1	Q8NGK1	321 aa		11.92	□□□□□ -0.5
ZNF655-223	ENST00000493947	XCL2	Q9UBD3	114 aa		11.92	□□□□□ -0.5
ZNF655-223	ENST00000493947	CACFD1	Q9UGQ2	172 aa		11.92	□□□□□ -0.5
ZNF655-223	ENST00000493947	HLA-DRB4	X5D2U9	266 aa		11.92	□□□□□ -0.5
ZNF655-223	ENST00000493947	GSTZ1	O43708	216 aa	Predicted RBP	11.91	□□□□□ -0.5
ZNF655-223	ENST00000493947	DEFB1	P60022	68 aa		11.91	□□□□□ -0.5
ZNF655-223	ENST00000493947	LYZL2	Q7Z4W2	148 aa		11.91	□□□□□ -0.5
ZNF655-223	ENST00000493947	CLVS1	Q8IUQ0	354 aa	Predicted RBP	11.91	□□□□□ -0.5
ZNF655-223	ENST00000493947	DYNC2LI1	Q8TCX1	351 aa		11.91	□□□□□ -0.5
ZNF655-223	ENST00000493947	RNF125	Q96EQ8	232 aa		11.91	□□□□□ -0.5
ZNF655-223	ENST00000493947	C1QTNF4	Q9BXJ3	329 aa		11.91	□□□□□ -0.5
ZNF655-223	ENST00000493947	WDR12	Q9GZL7	423 aa	Known RBP	11.91	□□□□□ -0.5
ZNF655-223	ENST00000493947	RBKS	Q9H477	322 aa		11.91	□□□□□ -0.5
ZNF655-223	ENST00000493947		U3KQ87	197 aa		11.91	□□□□□ -0.5
ZNF655-223	ENST00000493947	NACA	E9PAV3	2078 aa		11.91	□□□□□ -0.5
ZNF655-223	ENST00000493947	DEFB131B	A0A096LNP1	70 aa		11.9	□□□□□ -0.5
ZNF655-223	ENST00000493947		A0A0B4J2A0	478 aa		11.9	□□□□□ -0.5
ZNF655-223	ENST00000493947	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.9	□□□□□ -0.5
ZNF655-223	ENST00000493947	IFNA10	P01566	189 aa		11.9	□□□□□ -0.5
ZNF655-223	ENST00000493947	ZNF705D	P0CH99	300 aa	Predicted RBP	11.9	□□□□□ -0.5
ZNF655-223	ENST00000493947	ZNF705B	P0CI00	300 aa	Predicted RBP	11.9	□□□□□ -0.5
ZNF655-223	ENST00000493947	NKX2-1	P43699	371 aa	Predicted RBP	11.9	□□□□□ -0.5
ZNF655-223	ENST00000493947	CCR6	P51684	374 aa		11.9	□□□□□ -0.5
ZNF655-223	ENST00000493947	IL18	Q14116	193 aa		11.9	□□□□□ -0.5
ZNF655-223	ENST00000493947	SMCO1	Q147U7	214 aa		11.9	□□□□□ -0.5
ZNF655-223	ENST00000493947	NOXA1	Q86UR1	476 aa		11.9	□□□□□ -0.5
ZNF655-223	ENST00000493947	DTD1	Q8TEA8	209 aa		11.9	□□□□□ -0.5
ZNF655-223	ENST00000493947	DIRAS2	Q96HU8	199 aa		11.9	□□□□□ -0.5
ZNF655-223	ENST00000493947	SOST	Q9BQB4	213 aa		11.9	□□□□□ -0.5
ZNF655-223	ENST00000493947	MRPS26	Q9BYN8	205 aa	Known RBP	11.9	□□□□□ -0.5
ZNF655-223	ENST00000493947	CCDC59	Q9P031	241 aa	Known RBP	11.9	□□□□□ -0.5
ZNF655-223	ENST00000493947	SHPK	Q9UHJ6	478 aa		11.9	□□□□□ -0.5
ZNF655-223	ENST00000493947		A0A1B0GVY2	172 aa		11.89	□□□□□ -0.51
ZNF655-223	ENST00000493947	SOCS3	O14543	225 aa		11.89	□□□□□ -0.51
ZNF655-223	ENST00000493947	NUTF2	P61970	127 aa	Known RBP	11.89	□□□□□ -0.51
ZNF655-223	ENST00000493947	ZNF90	Q03938	601 aa		11.89	□□□□□ -0.51
ZNF655-223	ENST00000493947	KLF9	Q13886	244 aa	Predicted RBP	11.89	□□□□□ -0.51
ZNF655-223	ENST00000493947	GAMT	Q14353	236 aa		11.89	□□□□□ -0.51
ZNF655-223	ENST00000493947	OR8G2P	Q6IF36	304 aa		11.89	□□□□□ -0.51
ZNF655-223	ENST00000493947	GPR141	Q7Z602	305 aa		11.89	□□□□□ -0.51
ZNF655-223	ENST00000493947	LGI3	Q8N145	548 aa		11.89	□□□□□ -0.51
ZNF655-223	ENST00000493947	NEU1	Q99519	415 aa		11.89	□□□□□ -0.51
ZNF655-223	ENST00000493947	RABL2A	Q9UBK7	228 aa	Predicted RBP	11.89	□□□□□ -0.51
ZNF655-223	ENST00000493947	RABL2B	Q9UNT1	228 aa		11.89	□□□□□ -0.51
ZNF655-223	ENST00000493947	KCNIP3	Q9Y2W7	256 aa		11.89	□□□□□ -0.51
ZNF655-223	ENST00000493947	PITX3	O75364	302 aa		11.88	□□□□□ -0.51
ZNF655-223	ENST00000493947	ZNF709	Q8N972	641 aa		11.88	□□□□□ -0.51
ZNF655-223	ENST00000493947	CLUHP3	Q96NS8	147 aa		11.88	□□□□□ -0.51
ZNF655-223	ENST00000493947	SAV1	Q9H4B6	383 aa	Predicted RBP	11.88	□□□□□ -0.51
ZNF655-223	ENST00000493947	DYNC1H1	Q14204	4646 aa	Known RBP	11.88	□□□□□ -0.51
ZNF655-223	ENST00000493947	IGKV1OR2-108	A0A075B7D4	117 aa		11.87	□□□□□ -0.51
ZNF655-223	ENST00000493947	AKR1C4	P17516	323 aa		11.87	□□□□□ -0.51
ZNF655-223	ENST00000493947	GPX4	P36969	197 aa	Predicted RBP	11.87	□□□□□ -0.51
ZNF655-223	ENST00000493947	GSG1L	Q6UXU4	331 aa		11.87	□□□□□ -0.51
ZNF655-223	ENST00000493947	SLIRP	Q9GZT3	109 aa	Known RBP	11.87	□□□□□ -0.51
ZNF655-223	ENST00000493947	SCP2D1	Q9UJQ7	156 aa		11.87	□□□□□ -0.51
ZNF655-223	ENST00000493947	NUP62	P37198	522 aa	Predicted RBP	11.86	□□□□□ -0.51
ZNF655-223	ENST00000493947	ATP5I	P56385	69 aa	Predicted RBP	11.86	□□□□□ -0.51
ZNF655-223	ENST00000493947	POM121L12	Q8N7R1	296 aa		11.86	□□□□□ -0.51
ZNF655-223	ENST00000493947	PBDC1	Q9BVG4	233 aa		11.86	□□□□□ -0.51
ZNF655-223	ENST00000493947	ZFP92	A6NM28	416 aa		11.85	□□□□□ -0.51
ZNF655-223	ENST00000493947	IGKV3-20	P01619	116 aa		11.85	□□□□□ -0.51
ZNF655-223	ENST00000493947	TNFSF8	P32971	234 aa		11.85	□□□□□ -0.51
ZNF655-223	ENST00000493947	PSMB3	P49720	205 aa		11.85	□□□□□ -0.51
ZNF655-223	ENST00000493947	FXYD7	P58549	80 aa		11.85	□□□□□ -0.51
ZNF655-223	ENST00000493947	ZNF79	Q15937	498 aa		11.85	□□□□□ -0.51
ZNF655-223	ENST00000493947	C1orf194	Q5T5A4	169 aa		11.85	□□□□□ -0.51
ZNF655-223	ENST00000493947	FOXI2	Q6ZQN5	318 aa		11.85	□□□□□ -0.51
ZNF655-223	ENST00000493947	LINC00336	Q6ZUF6	198 aa		11.85	□□□□□ -0.51
ZNF655-223	ENST00000493947	RAB2B	Q8WUD1	216 aa		11.85	□□□□□ -0.51
ZNF655-223	ENST00000493947	C17orf77	Q96MU5	243 aa		11.85	□□□□□ -0.51
ZNF655-223	ENST00000493947	SCGB3A2	Q96PL1	93 aa		11.85	□□□□□ -0.51
ZNF655-223	ENST00000493947	RSL24D1	Q9UHA3	163 aa	Known RBP	11.85	□□□□□ -0.51
ZNF655-223	ENST00000493947	MUC4	Q99102	2169 aa		11.84	□□□□□ -0.51
ZNF655-223	ENST00000493947	SMIM9	A6NGZ8	99 aa		11.84	□□□□□ -0.51
ZNF655-223	ENST00000493947	PRSS46	E5RG02	174 aa		11.84	□□□□□ -0.51
ZNF655-223	ENST00000493947	RTL8C	O15255	209 aa		11.84	□□□□□ -0.51
ZNF655-223	ENST00000493947		P0DMU3	169 aa		11.84	□□□□□ -0.51
ZNF655-223	ENST00000493947	FAM231A	P0DMU4	169 aa		11.84	□□□□□ -0.51
ZNF655-223	ENST00000493947	FAM231C	P0DMU5	169 aa		11.84	□□□□□ -0.51
ZNF655-223	ENST00000493947	TMBIM6	P55061	237 aa		11.84	□□□□□ -0.51
ZNF655-223	ENST00000493947	PAX9	P55771	341 aa		11.84	□□□□□ -0.51
ZNF655-223	ENST00000493947	CENPS	Q8N2Z9	138 aa		11.84	□□□□□ -0.51
ZNF655-223	ENST00000493947	THAP8	Q8NA92	274 aa		11.84	□□□□□ -0.51
ZNF655-223	ENST00000493947	TRIM63	Q969Q1	353 aa		11.84	□□□□□ -0.51
ZNF655-223	ENST00000493947	SLC35E1	Q96K37	410 aa		11.84	□□□□□ -0.51
ZNF655-223	ENST00000493947	LINC00052	Q96N35	136 aa		11.84	□□□□□ -0.51
ZNF655-223	ENST00000493947	BCL7B	Q9BQE9	202 aa		11.84	□□□□□ -0.51
ZNF655-223	ENST00000493947	NDUFAF3	Q9BU61	184 aa		11.84	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms