RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 DTX2Q86UW9 622 aa9.46□□□□□ -0.89
BRCA1-222ENST00000493919 SCCPDHQ8NBX0 429 aa9.46□□□□□ -0.89
BRCA1-222ENST00000493919 FAM110DQ8TAY7 271 aaPredicted RBP9.46□□□□□ -0.89
BRCA1-222ENST00000493919 DYNLRB1Q9NP97 96 aa9.46□□□□□ -0.89
BRCA1-222ENST00000493919 M0R135 149 aa9.46□□□□□ -0.9
BRCA1-222ENST00000493919 ENSAO43768 121 aaKnown RBP9.46□□□□□ -0.9
BRCA1-222ENST00000493919 LINC00694P0DN24 101 aa9.46□□□□□ -0.9
BRCA1-222ENST00000493919 VDAC2P45880 294 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-222ENST00000493919 PPP1CBP62140 327 aa9.46□□□□□ -0.9
BRCA1-222ENST00000493919 ATP5G2Q06055 141 aa9.46□□□□□ -0.9
BRCA1-222ENST00000493919 C11orf71Q6IPW1 123 aa9.46□□□□□ -0.9
BRCA1-222ENST00000493919 FGFRL1Q8N441 504 aa9.46□□□□□ -0.9
BRCA1-222ENST00000493919 TMEM229BQ8NBD8 167 aa9.46□□□□□ -0.9
BRCA1-222ENST00000493919 OTOSQ8NHW6 89 aa9.46□□□□□ -0.9
BRCA1-222ENST00000493919 C8orf46Q8TAG6 207 aa9.46□□□□□ -0.9
BRCA1-222ENST00000493919 SPTSSAQ969W0 71 aa9.46□□□□□ -0.9
BRCA1-222ENST00000493919 MRPL24Q96A35 216 aaKnown RBP9.46□□□□□ -0.9
BRCA1-222ENST00000493919 ZNF799Q96GE5 643 aa9.46□□□□□ -0.9
BRCA1-222ENST00000493919 AMELYQ99218 206 aa9.46□□□□□ -0.9
BRCA1-222ENST00000493919 NRN1Q9NPD7 142 aa9.46□□□□□ -0.9
BRCA1-222ENST00000493919 TAAR3PQ9P1P4 343 aa9.46□□□□□ -0.9
BRCA1-222ENST00000493919 KLHDC2Q9Y2U9 406 aa9.46□□□□□ -0.9
BRCA1-222ENST00000493919 H3BUT2 72 aa9.45□□□□□ -0.9
BRCA1-222ENST00000493919 SOCS1O15524 211 aa9.45□□□□□ -0.9
BRCA1-222ENST00000493919 SERF1AO75920 110 aa9.45□□□□□ -0.9
BRCA1-222ENST00000493919 CDK2P24941 298 aa9.45□□□□□ -0.9
BRCA1-222ENST00000493919 PPP1CCP36873 323 aaKnown RBP9.45□□□□□ -0.9
BRCA1-222ENST00000493919 GNG5P63218 68 aa9.45□□□□□ -0.9
BRCA1-222ENST00000493919 TTC32Q5I0X7 151 aa9.45□□□□□ -0.9
BRCA1-222ENST00000493919 FAM90A2PQ658T7 463 aa9.45□□□□□ -0.9
BRCA1-222ENST00000493919 RASL11AQ6T310 242 aa9.45□□□□□ -0.9
BRCA1-222ENST00000493919 FAM159AQ6UWV7 190 aa9.45□□□□□ -0.9
BRCA1-222ENST00000493919 C20orf173Q96LM9 149 aa9.45□□□□□ -0.9
BRCA1-222ENST00000493919 YTHDF2Q9Y5A9 579 aaKnown RBP9.45□□□□□ -0.9
BRCA1-222ENST00000493919 CREBBPQ92793 2442 aa9.45□□□□□ -0.9
BRCA1-222ENST00000493919 TMEM262E9PQX1 116 aa9.44□□□□□ -0.9
BRCA1-222ENST00000493919 CD1AP06126 327 aa9.44□□□□□ -0.9
BRCA1-222ENST00000493919 H2BFMP0C1H6 154 aa9.44□□□□□ -0.9
BRCA1-222ENST00000493919 CAMPP49913 170 aa9.44□□□□□ -0.9
BRCA1-222ENST00000493919 HSPE1P61604 102 aaKnown RBP9.44□□□□□ -0.9
BRCA1-222ENST00000493919 GGTLC2Q14390 218 aa9.44□□□□□ -0.9
BRCA1-222ENST00000493919 OXLD1Q5BKU9 147 aa9.44□□□□□ -0.9
BRCA1-222ENST00000493919 RFLNBQ8N5W9 214 aa9.44□□□□□ -0.9
BRCA1-222ENST00000493919 OR1L1Q8NH94 360 aa9.44□□□□□ -0.9
BRCA1-222ENST00000493919 C10orf35Q96D05 121 aa9.44□□□□□ -0.9
BRCA1-222ENST00000493919 PRNDQ9UKY0 176 aa9.44□□□□□ -0.9
BRCA1-222ENST00000493919 ARID1AO14497 2285 aa9.44□□□□□ -0.9
BRCA1-222ENST00000493919 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-222ENST00000493919 LOC102723971A0A1B0GUV8 181 aa9.44□□□□□ -0.9
BRCA1-222ENST00000493919 NDUFS7O75251 213 aa9.44□□□□□ -0.9
BRCA1-222ENST00000493919 CRISP2P16562 243 aa9.44□□□□□ -0.9
BRCA1-222ENST00000493919 VDAC1P21796 283 aa9.44□□□□□ -0.9
BRCA1-222ENST00000493919 AADACP22760 399 aa9.44□□□□□ -0.9
BRCA1-222ENST00000493919 MPV17P39210 176 aa9.44□□□□□ -0.9
BRCA1-222ENST00000493919 XGP55808 180 aa9.44□□□□□ -0.9
BRCA1-222ENST00000493919 INSL4Q14641 139 aa9.44□□□□□ -0.9
BRCA1-222ENST00000493919 ZNF718Q3SXZ3 478 aa9.44□□□□□ -0.9
BRCA1-222ENST00000493919 OSR1Q8TAX0 266 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-222ENST00000493919 IGFBPL1Q8WX77 278 aa9.44□□□□□ -0.9
BRCA1-222ENST00000493919 VGLL1Q99990 258 aa9.44□□□□□ -0.9
BRCA1-222ENST00000493919 RASL11BQ9BPW5 248 aa9.44□□□□□ -0.9
BRCA1-222ENST00000493919 SPANXDQ9BXN6 97 aa9.44□□□□□ -0.9
BRCA1-222ENST00000493919 ZNF469Q96JG9 3925 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-222ENST00000493919 TRAV9-1A0A075B6T8 112 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 OR9G9P0C7N8 305 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 IGLL1P15814 213 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 LINC00310P59036 64 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 RSPO1Q2MKA7 263 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-222ENST00000493919 C4orf48Q5BLP8 95 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 CYP2G1PQ6ZSU1 146 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 LINC00336Q6ZUF6 198 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 ZCCHC24Q8N2G6 241 aaKnown RBP9.43□□□□□ -0.9
BRCA1-222ENST00000493919 OR1L8Q8NGR8 309 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 KLF14Q8TD94 323 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-222ENST00000493919 WIPF2Q8TF74 440 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-222ENST00000493919 SSBP3Q9BWW4 388 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-222ENST00000493919 MS4A6AQ9H2W1 248 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 C1RLQ9NZP8 487 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 ARFGEF3Q5TH69 2177 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 TRAV24A0A0B4J272 114 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 FAM90A20PA6NIJ5 464 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 OVOL3O00110 214 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 NPFFO15130 113 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 CHST1O43916 411 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 GPR137BO60478 399 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 C3orf79P0CE67 100 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 GPR183P32249 361 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 DIAPH2-AS1Q14236 149 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 TEX36Q5VZQ5 186 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 BAGE3Q86Y29 109 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 BAGE2Q86Y30 109 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 CLDND2Q8NHS1 167 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 MRPL30Q8TCC3 161 aaKnown RBP9.43□□□□□ -0.9
BRCA1-222ENST00000493919 BORCS7Q96B45 105 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 TP53TG3Q9ULZ0 132 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 TMEM14AQ9Y6G1 99 aa9.43□□□□□ -0.9
BRCA1-222ENST00000493919 LY6HO94772 140 aa9.42□□□□□ -0.9
BRCA1-222ENST00000493919 FCGR2CP31995 323 aa9.42□□□□□ -0.9
BRCA1-222ENST00000493919 ZNF85Q03923 595 aa9.42□□□□□ -0.9
BRCA1-222ENST00000493919 GAGE2BQ13066 116 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 1270.8 ms