RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 INS-IGF2F8WCM5 200 aa11.08□□□□□ -0.63
VCP-207ENST00000493886 ENSAO43768 121 aaKnown RBP11.08□□□□□ -0.63
VCP-207ENST00000493886 LCN2P80188 198 aa11.08□□□□□ -0.63
VCP-207ENST00000493886 PRR20EP86478 221 aa11.08□□□□□ -0.63
VCP-207ENST00000493886 PRR20CP86479 221 aa11.08□□□□□ -0.63
VCP-207ENST00000493886 PRR20DP86480 221 aa11.08□□□□□ -0.63
VCP-207ENST00000493886 PRR20BP86481 221 aa11.08□□□□□ -0.63
VCP-207ENST00000493886 PRR20AP86496 221 aa11.08□□□□□ -0.63
VCP-207ENST00000493886 MLANAQ16655 118 aa11.08□□□□□ -0.63
VCP-207ENST00000493886 RITA1Q96K30 269 aa11.08□□□□□ -0.63
VCP-207ENST00000493886 CLEC7AQ9BXN2 247 aa11.08□□□□□ -0.63
VCP-207ENST00000493886 SAP30O75446 220 aa11.08□□□□□ -0.64
VCP-207ENST00000493886 OR10J4P0C629 311 aa11.08□□□□□ -0.64
VCP-207ENST00000493886 PSG1P11464 419 aa11.08□□□□□ -0.64
VCP-207ENST00000493886 ID1P41134 155 aa11.08□□□□□ -0.64
VCP-207ENST00000493886 C10orf55Q5SWW7 151 aa11.08□□□□□ -0.64
VCP-207ENST00000493886 C11orf71Q6IPW1 123 aa11.08□□□□□ -0.64
VCP-207ENST00000493886 C8orf46Q8TAG6 207 aa11.08□□□□□ -0.64
VCP-207ENST00000493886 IGHV2-70DA0A0C4DH43 119 aa11.08□□□□□ -0.64
VCP-207ENST00000493886 CGB1A6NKQ9 187 aa11.08□□□□□ -0.64
VCP-207ENST00000493886 F2Z2F3 143 aa11.08□□□□□ -0.64
VCP-207ENST00000493886 RBP4P02753 201 aa11.08□□□□□ -0.64
VCP-207ENST00000493886 PGPEP1Q9NXJ5 209 aa11.08□□□□□ -0.64
VCP-207ENST00000493886 SMPXQ9UHP9 88 aa11.08□□□□□ -0.64
VCP-207ENST00000493886 SLC45A2Q9UMX9 530 aa11.08□□□□□ -0.64
VCP-207ENST00000493886 DLL1O00548 723 aa11.07□□□□□ -0.64
VCP-207ENST00000493886 LINC00869P0C866 280 aa11.07□□□□□ -0.64
VCP-207ENST00000493886 RHOBP62745 196 aa11.07□□□□□ -0.64
VCP-207ENST00000493886 CD69Q07108 199 aa11.07□□□□□ -0.64
VCP-207ENST00000493886 PSG5Q15238 335 aa11.07□□□□□ -0.64
VCP-207ENST00000493886 VAMP3Q15836 100 aa11.07□□□□□ -0.64
VCP-207ENST00000493886 MRPL52Q86TS9 123 aaKnown RBP11.07□□□□□ -0.64
VCP-207ENST00000493886 MS4A10Q96PG2 267 aa11.07□□□□□ -0.64
VCP-207ENST00000493886 MIEN1Q9BRT3 115 aa11.07□□□□□ -0.64
VCP-207ENST00000493886 TPSG1Q9NRR2 321 aa11.07□□□□□ -0.64
VCP-207ENST00000493886 IGKV1OR2-108A0A075B7D4 117 aa11.07□□□□□ -0.64
VCP-207ENST00000493886 IER3P46695 156 aa11.07□□□□□ -0.64
VCP-207ENST00000493886 TCL1AP56279 114 aa11.07□□□□□ -0.64
VCP-207ENST00000493886 ARF6P62330 175 aa11.07□□□□□ -0.64
VCP-207ENST00000493886 WT1-ASQ06250 92 aa11.07□□□□□ -0.64
VCP-207ENST00000493886 FXYD3Q14802 87 aa11.07□□□□□ -0.64
VCP-207ENST00000493886 ZNF738Q8NE65 137 aa11.07□□□□□ -0.64
VCP-207ENST00000493886 TIMD4Q96H15 378 aa11.07□□□□□ -0.64
VCP-207ENST00000493886 ATP6V0BQ99437 205 aa11.07□□□□□ -0.64
VCP-207ENST00000493886 BUB1B-PAK6H3BSN5 160 aa11.06□□□□□ -0.64
VCP-207ENST00000493886 OR7C2O60412 319 aa11.06□□□□□ -0.64
VCP-207ENST00000493886 COX7A1P24310 79 aa11.06□□□□□ -0.64
VCP-207ENST00000493886 IGHV3-48P01763 117 aa11.06□□□□□ -0.64
VCP-207ENST00000493886 CD99P14209 185 aa11.06□□□□□ -0.64
VCP-207ENST00000493886 CRYBB3P26998 211 aa11.06□□□□□ -0.64
VCP-207ENST00000493886 FOXL1Q12952 345 aa11.06□□□□□ -0.64
VCP-207ENST00000493886 CMTM2Q8TAZ6 248 aa11.06□□□□□ -0.64
VCP-207ENST00000493886 NEU4Q8WWR8 484 aaPredicted RBP11.06□□□□□ -0.64
VCP-207ENST00000493886 INSIG2Q9Y5U4 225 aa11.06□□□□□ -0.64
VCP-207ENST00000493886 HIVEP3Q5T1R4 2406 aa11.06□□□□□ -0.64
VCP-207ENST00000493886 IGHV1-3A0A0C4DH29 117 aa11.05□□□□□ -0.64
VCP-207ENST00000493886 OR10J1P30954 320 aa11.05□□□□□ -0.64
VCP-207ENST00000493886 MRGPRG-AS1Q2M3A8 158 aa11.05□□□□□ -0.64
VCP-207ENST00000493886 LY6G5BQ8NDX9 201 aa11.05□□□□□ -0.64
VCP-207ENST00000493886 ONECUT1Q9UBC0 465 aa11.05□□□□□ -0.64
VCP-207ENST00000493886 A4D1N5 150 aa11.05□□□□□ -0.64
VCP-207ENST00000493886 CNIH1O95406 144 aa11.05□□□□□ -0.64
VCP-207ENST00000493886 TOMM40O96008 361 aa11.05□□□□□ -0.64
VCP-207ENST00000493886 OR8I2Q8N0Y5 310 aa11.05□□□□□ -0.64
VCP-207ENST00000493886 TEX45Q8NA69 505 aa11.05□□□□□ -0.64
VCP-207ENST00000493886 NHLRC2Q8NBF2 726 aa11.05□□□□□ -0.64
VCP-207ENST00000493886 MRPL18Q9H0U6 180 aaKnown RBP11.05□□□□□ -0.64
VCP-207ENST00000493886 RNASE7Q9H1E1 156 aaKnown RBP11.05□□□□□ -0.64
VCP-207ENST00000493886 PAM16Q9Y3D7 125 aa11.05□□□□□ -0.64
VCP-207ENST00000493886 SPTBN1Q01082 2364 aaKnown RBP11.05□□□□□ -0.64
VCP-207ENST00000493886 KIAA1644Q3SXP7 199 aa11.05□□□□□ -0.64
VCP-207ENST00000493886 CENPWQ5EE01 88 aa11.05□□□□□ -0.64
VCP-207ENST00000493886 TOMM20LQ6UXN7 152 aa11.05□□□□□ -0.64
VCP-207ENST00000493886 TBX15Q96SF7 602 aa11.05□□□□□ -0.64
VCP-207ENST00000493886 TP53TG3Q9ULZ0 132 aa11.05□□□□□ -0.64
VCP-207ENST00000493886 A0A1W2PPI3 338 aa11.04□□□□□ -0.64
VCP-207ENST00000493886 SNURFLB1AK76 121 aa11.04□□□□□ -0.64
VCP-207ENST00000493886 FCN1O00602 326 aa11.04□□□□□ -0.64
VCP-207ENST00000493886 SERF1AO75920 110 aa11.04□□□□□ -0.64
VCP-207ENST00000493886 SUB1P53999 127 aaKnown RBP eCLIP11.04□□□□□ -0.648e-9■■■□□ 19.2
VCP-207ENST00000493886 ATP5J2P56134 94 aa11.04□□□□□ -0.64
VCP-207ENST00000493886 PQLC2Q6ZP29 291 aa11.04□□□□□ -0.64
VCP-207ENST00000493886 PNKDQ8N490 385 aa11.04□□□□□ -0.64
VCP-207ENST00000493886 OR1N2Q8NGR9 330 aa11.04□□□□□ -0.64
VCP-207ENST00000493886 EAF1Q96JC9 268 aaPredicted RBP11.04□□□□□ -0.64
VCP-207ENST00000493886 TXNDC17Q9BRA2 123 aa11.04□□□□□ -0.64
VCP-207ENST00000493886 AMMECR1Q9Y4X0 333 aaPredicted RBP11.04□□□□□ -0.64
VCP-207ENST00000493886 COX11Q9Y6N1 276 aa11.04□□□□□ -0.64
VCP-207ENST00000493886 CORTO00230 105 aa11.04□□□□□ -0.64
VCP-207ENST00000493886 CNTFRP26992 372 aa11.04□□□□□ -0.64
VCP-207ENST00000493886 C5orf64Q2M2E5 130 aa11.04□□□□□ -0.64
VCP-207ENST00000493886 DTX2Q86UW9 622 aa11.04□□□□□ -0.64
VCP-207ENST00000493886 OR2T6Q8NHC8 308 aa11.04□□□□□ -0.64
VCP-207ENST00000493886 RPEQ96AT9 228 aa11.04□□□□□ -0.64
VCP-207ENST00000493886 LRBAP50851 2863 aa11.04□□□□□ -0.64
VCP-207ENST00000493886 LINC00310P59036 64 aa11.03□□□□□ -0.64
VCP-207ENST00000493886 MMD2Q8IY49 270 aa11.03□□□□□ -0.64
VCP-207ENST00000493886 UHRF2Q96PU4 802 aa11.03□□□□□ -0.64
VCP-207ENST00000493886 FAM103A1Q9BTL3 118 aaKnown RBP11.03□□□□□ -0.64
VCP-207ENST00000493886 SS18L2Q9UHA2 77 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms