RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 ANXA3P12429 323 aa10.64□□□□□ -0.71
ATG4B-223ENST00000493618 RBMY1FQ15415 496 aaKnown RBP10.64□□□□□ -0.71
ATG4B-223ENST00000493618 MORN3Q6PF18 240 aaPredicted RBP10.64□□□□□ -0.71
ATG4B-223ENST00000493618 SIGLEC15Q6ZMC9 328 aa10.64□□□□□ -0.71
ATG4B-223ENST00000493618 RAB40CQ96S21 281 aa10.64□□□□□ -0.71
ATG4B-223ENST00000493618 PBDC1Q9BVG4 233 aa10.64□□□□□ -0.71
ATG4B-223ENST00000493618 U3KQ87 197 aa10.64□□□□□ -0.71
ATG4B-223ENST00000493618 FAM90A26D6RGX4 464 aa10.63□□□□□ -0.71
ATG4B-223ENST00000493618 IAPPP10997 89 aa10.63□□□□□ -0.71
ATG4B-223ENST00000493618 ZNF90Q03938 601 aa10.63□□□□□ -0.71
ATG4B-223ENST00000493618 TRIM63Q969Q1 353 aa10.63□□□□□ -0.71
ATG4B-223ENST00000493618 CACFD1Q9UGQ2 172 aa10.63□□□□□ -0.71
ATG4B-223ENST00000493618 PAIP2BQ9ULR5 123 aaKnown RBP10.63□□□□□ -0.71
ATG4B-223ENST00000493618 X6R8D5 127 aa10.63□□□□□ -0.71
ATG4B-223ENST00000493618 CCDC160A6NGH7 325 aa10.62□□□□□ -0.71
ATG4B-223ENST00000493618 ZFP92A6NM28 416 aa10.62□□□□□ -0.71
ATG4B-223ENST00000493618 BUB3O43684 328 aa10.62□□□□□ -0.71
ATG4B-223ENST00000493618 FAUP35544 74 aaKnown RBP10.62□□□□□ -0.71
ATG4B-223ENST00000493618 AP2S1P53680 142 aaPredicted RBP10.62□□□□□ -0.71
ATG4B-223ENST00000493618 DEFB1P60022 68 aa10.62□□□□□ -0.71
ATG4B-223ENST00000493618 SRPXP78539 464 aa10.62□□□□□ -0.71
ATG4B-223ENST00000493618 GAMTQ14353 236 aa10.62□□□□□ -0.71
ATG4B-223ENST00000493618 TOMM5Q8N4H5 51 aa10.62□□□□□ -0.71
ATG4B-223ENST00000493618 C2CD4CQ8TF44 421 aa10.62□□□□□ -0.71
ATG4B-223ENST00000493618 RNF125Q96EQ8 232 aa10.62□□□□□ -0.71
ATG4B-223ENST00000493618 SLC35E1Q96K37 410 aa10.62□□□□□ -0.71
ATG4B-223ENST00000493618 NRN1Q9NPD7 142 aa10.62□□□□□ -0.71
ATG4B-223ENST00000493618 V9GYH0 126 aa10.62□□□□□ -0.71
ATG4B-223ENST00000493618 IGKV1D-37A0A075B6S9 117 aa10.61□□□□□ -0.71
ATG4B-223ENST00000493618 ELOA3CA0A087WX78 387 aaPredicted RBP10.61□□□□□ -0.71
ATG4B-223ENST00000493618 VAMP1P23763 118 aa10.61□□□□□ -0.71
ATG4B-223ENST00000493618 OR2F1Q13607 317 aa10.61□□□□□ -0.71
ATG4B-223ENST00000493618 ZNF79Q15937 498 aa10.61□□□□□ -0.71
ATG4B-223ENST00000493618 LGALS9CQ6DKI2 356 aa10.61□□□□□ -0.71
ATG4B-223ENST00000493618 ZNF705EA8MWA4 302 aaPredicted RBP10.6□□□□□ -0.71
ATG4B-223ENST00000493618 IGLL5B9A064 214 aa10.6□□□□□ -0.71
ATG4B-223ENST00000493618 PITX3O75364 302 aa10.6□□□□□ -0.71
ATG4B-223ENST00000493618 MIFP14174 115 aa10.6□□□□□ -0.71
ATG4B-223ENST00000493618 HLA-DMBP28068 263 aa10.6□□□□□ -0.71
ATG4B-223ENST00000493618 GPX4P36969 197 aaPredicted RBP10.6□□□□□ -0.71
ATG4B-223ENST00000493618 FXYD7P58549 80 aa10.6□□□□□ -0.71
ATG4B-223ENST00000493618 LYZP61626 148 aa10.6□□□□□ -0.71
ATG4B-223ENST00000493618 SNRPD3P62318 126 aaKnown RBP10.6□□□□□ -0.71
ATG4B-223ENST00000493618 TMEM41BQ5BJD5 291 aa10.6□□□□□ -0.71
ATG4B-223ENST00000493618 ZNF767PQ75MW2 155 aa10.6□□□□□ -0.71
ATG4B-223ENST00000493618 CSNK1G2-AS1Q8NCQ2 148 aa10.6□□□□□ -0.71
ATG4B-223ENST00000493618 MAGT1Q9H0U3 335 aa10.6□□□□□ -0.71
ATG4B-223ENST00000493618 XCL2Q9UBD3 114 aa10.6□□□□□ -0.71
ATG4B-223ENST00000493618 TBC1D24Q9ULP9 559 aa10.6□□□□□ -0.71
ATG4B-223ENST00000493618 IGKV3-20P01619 116 aa10.59□□□□□ -0.71
ATG4B-223ENST00000493618 HOXB5P09067 269 aa10.59□□□□□ -0.71
ATG4B-223ENST00000493618 AP3S2P59780 193 aa10.59□□□□□ -0.71
ATG4B-223ENST00000493618 PRR20EP86478 221 aa10.59□□□□□ -0.71
ATG4B-223ENST00000493618 PRR20CP86479 221 aa10.59□□□□□ -0.71
ATG4B-223ENST00000493618 PRR20DP86480 221 aa10.59□□□□□ -0.71
ATG4B-223ENST00000493618 PRR20BP86481 221 aa10.59□□□□□ -0.71
ATG4B-223ENST00000493618 PRR20AP86496 221 aa10.59□□□□□ -0.71
ATG4B-223ENST00000493618 PPP1R1AQ13522 171 aa10.59□□□□□ -0.71
ATG4B-223ENST00000493618 TMEM128Q5BJH2 165 aa10.59□□□□□ -0.71
ATG4B-223ENST00000493618 GDF5OSQ5U4N7 250 aa10.59□□□□□ -0.71
ATG4B-223ENST00000493618 Q6ZTC4 211 aa10.59□□□□□ -0.71
ATG4B-223ENST00000493618 LINC00052Q96N35 136 aa10.59□□□□□ -0.71
ATG4B-223ENST00000493618 WDR12Q9GZL7 423 aaKnown RBP10.59□□□□□ -0.71
ATG4B-223ENST00000493618 CELA1Q9UNI1 258 aa10.59□□□□□ -0.71
ATG4B-223ENST00000493618 DUXBA0A1W2PPF3 345 aa10.58□□□□□ -0.72
ATG4B-223ENST00000493618 H3BMM0 161 aa10.58□□□□□ -0.72
ATG4B-223ENST00000493618 SFT2D2O95562 160 aa10.58□□□□□ -0.72
ATG4B-223ENST00000493618 RAB11AP62491 216 aa10.58□□□□□ -0.72
ATG4B-223ENST00000493618 PPP1R14BQ96C90 147 aa10.58□□□□□ -0.72
ATG4B-223ENST00000493618 APLNQ9ULZ1 77 aa10.58□□□□□ -0.72
ATG4B-223ENST00000493618 IGKV1OR2-108A0A075B7D4 117 aa10.57□□□□□ -0.72
ATG4B-223ENST00000493618 WRBO00258 174 aa10.57□□□□□ -0.72
ATG4B-223ENST00000493618 S100A5P33763 92 aa10.57□□□□□ -0.72
ATG4B-223ENST00000493618 ATP5IP56385 69 aaPredicted RBP10.57□□□□□ -0.72
ATG4B-223ENST00000493618 OR8G2PQ6IF36 304 aa10.57□□□□□ -0.72
ATG4B-223ENST00000493618 HRH4Q9H3N8 390 aa10.57□□□□□ -0.72
ATG4B-223ENST00000493618 C11orf94C9JXX5 98 aa10.56□□□□□ -0.72
ATG4B-223ENST00000493618 MED6O75586 246 aa10.56□□□□□ -0.72
ATG4B-223ENST00000493618 HLA-DRB4P13762 266 aa10.56□□□□□ -0.72
ATG4B-223ENST00000493618 NUP62P37198 522 aaPredicted RBP10.56□□□□□ -0.72
ATG4B-223ENST00000493618 NKX2-1P43699 371 aaPredicted RBP10.56□□□□□ -0.72
ATG4B-223ENST00000493618 GGNBP1Q5YKI7 109 aa10.56□□□□□ -0.72
ATG4B-223ENST00000493618 CCDC190Q86UF4 302 aa10.56□□□□□ -0.72
ATG4B-223ENST00000493618 CENPSQ8N2Z9 138 aa10.56□□□□□ -0.72
ATG4B-223ENST00000493618 LRTM2Q8N967 370 aa10.56□□□□□ -0.72
ATG4B-223ENST00000493618 SLC25A21Q9BQT8 299 aaPredicted RBP10.56□□□□□ -0.72
ATG4B-223ENST00000493618 SEPSECSQ9HD40 501 aaKnown RBP10.56□□□□□ -0.72
ATG4B-223ENST00000493618 HLA-DRB4X5D2U9 266 aa10.56□□□□□ -0.72
ATG4B-223ENST00000493618 IGHV3OR16-12A0A075B7B8 117 aa10.55□□□□□ -0.72
ATG4B-223ENST00000493618 TRAV10A0A0B4J240 114 aa10.55□□□□□ -0.72
ATG4B-223ENST00000493618 SNRPGP15A8MWD9 76 aa10.55□□□□□ -0.72
ATG4B-223ENST00000493618 H3BP45 60 aa10.55□□□□□ -0.72
ATG4B-223ENST00000493618 SYNGR2O43760 224 aa10.55□□□□□ -0.72
ATG4B-223ENST00000493618 FABP1P07148 127 aa10.55□□□□□ -0.72
ATG4B-223ENST00000493618 SLC25A6P12236 298 aa10.55□□□□□ -0.72
ATG4B-223ENST00000493618 GATA2P23769 480 aaPredicted RBP10.55□□□□□ -0.72
ATG4B-223ENST00000493618 NUTF2P61970 127 aaKnown RBP10.55□□□□□ -0.72
ATG4B-223ENST00000493618 SPANXN5Q5MJ07 72 aa10.55□□□□□ -0.72
ATG4B-223ENST00000493618 THAP8Q8NA92 274 aa10.55□□□□□ -0.72
ATG4B-223ENST00000493618 COQ8AQ8NI60 647 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms