RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 MOB4Q9Y3A3 225 aa11.05□□□□□ -0.64
PTPN7-216ENST00000492977 SCO2A0A1W2PP80 73 aa11.04□□□□□ -0.64
PTPN7-216ENST00000492977 CLDN34H7C241 214 aa11.04□□□□□ -0.64
PTPN7-216ENST00000492977 OR10J4P0C629 311 aa11.04□□□□□ -0.64
PTPN7-216ENST00000492977 KRTAP10-9P60411 292 aa11.04□□□□□ -0.64
PTPN7-216ENST00000492977 YPEL3P61236 119 aaPredicted RBP11.04□□□□□ -0.64
PTPN7-216ENST00000492977 UBE2L3P68036 154 aaKnown RBP11.04□□□□□ -0.64
PTPN7-216ENST00000492977 LOXL1Q08397 574 aaPredicted RBP11.04□□□□□ -0.64
PTPN7-216ENST00000492977 DEFB113Q30KQ7 82 aa11.04□□□□□ -0.64
PTPN7-216ENST00000492977 FAM24BQ8N5W8 94 aa11.04□□□□□ -0.64
PTPN7-216ENST00000492977 OR5T1Q8NG75 326 aa11.04□□□□□ -0.64
PTPN7-216ENST00000492977 FAM110DQ8TAY7 271 aaPredicted RBP11.04□□□□□ -0.64
PTPN7-216ENST00000492977 SSX3Q99909 188 aa11.04□□□□□ -0.64
PTPN7-216ENST00000492977 HIGD1AQ9Y241 93 aa11.04□□□□□ -0.64
PTPN7-216ENST00000492977 J3QLI3 93 aa11.03□□□□□ -0.64
PTPN7-216ENST00000492977 GNG7O60262 68 aa11.03□□□□□ -0.64
PTPN7-216ENST00000492977 TOMM40O96008 361 aa11.03□□□□□ -0.64
PTPN7-216ENST00000492977 CRYBA1P05813 215 aa11.03□□□□□ -0.64
PTPN7-216ENST00000492977 SMUG1Q53HV7 270 aa11.03□□□□□ -0.64
PTPN7-216ENST00000492977 UNQ5815/PRO19632Q6UWF5 114 aa11.03□□□□□ -0.64
PTPN7-216ENST00000492977 TXN2Q99757 166 aa11.03□□□□□ -0.64
PTPN7-216ENST00000492977 C21orf62Q9NYP8 219 aa11.03□□□□□ -0.64
PTPN7-216ENST00000492977 ABCA1O95477 2261 aa11.03□□□□□ -0.64
PTPN7-216ENST00000492977 ATP6V0E1O15342 81 aa11.03□□□□□ -0.64
PTPN7-216ENST00000492977 SCGB2A1O75556 95 aa11.03□□□□□ -0.64
PTPN7-216ENST00000492977 NDUFB8O95169 186 aa11.03□□□□□ -0.64
PTPN7-216ENST00000492977 RAB5AP20339 215 aa11.03□□□□□ -0.64
PTPN7-216ENST00000492977 LYZP61626 148 aa11.03□□□□□ -0.64
PTPN7-216ENST00000492977 C16orf82Q7Z2V1 217 aa11.03□□□□□ -0.64
PTPN7-216ENST00000492977 VN1R17PQ8TDU5 208 aa11.03□□□□□ -0.64
PTPN7-216ENST00000492977 FXYD5Q96DB9 178 aa11.03□□□□□ -0.64
PTPN7-216ENST00000492977 ANAPC16Q96DE5 110 aa11.03□□□□□ -0.64
PTPN7-216ENST00000492977 DERL1Q9BUN8 251 aa11.03□□□□□ -0.64
PTPN7-216ENST00000492977 MRPL27Q9P0M9 148 aaKnown RBP11.03□□□□□ -0.64
PTPN7-216ENST00000492977 MLXQ9UH92 298 aa11.03□□□□□ -0.64
PTPN7-216ENST00000492977 LRRK2Q5S007 2527 aa11.02□□□□□ -0.65
PTPN7-216ENST00000492977 PYYP10082 97 aa11.02□□□□□ -0.65
PTPN7-216ENST00000492977 FCGR2BP31994 310 aaPredicted RBP11.02□□□□□ -0.65
PTPN7-216ENST00000492977 SUMO1P63165 101 aaKnown RBP11.02□□□□□ -0.65
PTPN7-216ENST00000492977 ELOBQ15370 118 aa11.02□□□□□ -0.65
PTPN7-216ENST00000492977 LINC01551Q86U37 167 aa11.02□□□□□ -0.65
PTPN7-216ENST00000492977 FBXL7Q9UJT9 491 aa11.02□□□□□ -0.65
PTPN7-216ENST00000492977 LY96Q9Y6Y9 160 aa11.02□□□□□ -0.65
PTPN7-216ENST00000492977 GGTLC3B5MD39 225 aa11.01□□□□□ -0.65
PTPN7-216ENST00000492977 C9JCJ5 164 aa11.01□□□□□ -0.65
PTPN7-216ENST00000492977 OR2J3O76001 311 aa11.01□□□□□ -0.65
PTPN7-216ENST00000492977 CD99P14209 185 aa11.01□□□□□ -0.65
PTPN7-216ENST00000492977 CRIP2P52943 208 aaPredicted RBP11.01□□□□□ -0.65
PTPN7-216ENST00000492977 Q56UQ5 140 aa11.01□□□□□ -0.65
PTPN7-216ENST00000492977 S100A7AQ86SG5 101 aa11.01□□□□□ -0.65
PTPN7-216ENST00000492977 TMEM219Q86XT9 240 aa11.01□□□□□ -0.65
PTPN7-216ENST00000492977 TCEAL7Q9BRU2 100 aa11.01□□□□□ -0.65
PTPN7-216ENST00000492977 SLC25A39Q9BZJ4 359 aaPredicted RBP11.01□□□□□ -0.65
PTPN7-216ENST00000492977 TRBV9A0A0B4J1U6 114 aa11□□□□□ -0.65
PTPN7-216ENST00000492977 WI2-2373I1.2A0A1W2PRP0 233 aa11□□□□□ -0.65
PTPN7-216ENST00000492977 A6NDX4 124 aa11□□□□□ -0.65
PTPN7-216ENST00000492977 HELTA6NFD8 242 aa11□□□□□ -0.65
PTPN7-216ENST00000492977 F8W735 103 aaPredicted RBP11□□□□□ -0.65
PTPN7-216ENST00000492977 J3QKU1 62 aa11□□□□□ -0.65
PTPN7-216ENST00000492977 M0QZK8 103 aa11□□□□□ -0.65
PTPN7-216ENST00000492977 AMY1AP04745 511 aa11□□□□□ -0.65
PTPN7-216ENST00000492977 PLA2G2AP14555 144 aa11□□□□□ -0.65
PTPN7-216ENST00000492977 CRYBB3P26998 211 aa11□□□□□ -0.65
PTPN7-216ENST00000492977 FLI1Q01543 452 aaPredicted RBP11□□□□□ -0.65
PTPN7-216ENST00000492977 ECSCRQ19T08 205 aa11□□□□□ -0.65
PTPN7-216ENST00000492977 ZNF343Q6P1L6 599 aa11□□□□□ -0.65
PTPN7-216ENST00000492977 ZNF491Q8N8L2 437 aa11□□□□□ -0.65
PTPN7-216ENST00000492977 Q8WTZ3 238 aa11□□□□□ -0.65
PTPN7-216ENST00000492977 MBD6Q96DN6 1003 aa11□□□□□ -0.65
PTPN7-216ENST00000492977 TMEM14CQ9P0S9 112 aa11□□□□□ -0.65
PTPN7-216ENST00000492977 PITPNC1Q9UKF7 332 aa11□□□□□ -0.65
PTPN7-216ENST00000492977 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11□□□□□ -0.654e-6■□□□□ 10.6
PTPN7-216ENST00000492977 TRBV20OR9-2A0A075B6H5 130 aa10.99□□□□□ -0.65
PTPN7-216ENST00000492977 C1orf196B1AJZ1 125 aa10.99□□□□□ -0.65
PTPN7-216ENST00000492977 H7BYZ3 331 aa10.99□□□□□ -0.65
PTPN7-216ENST00000492977 PPP1R2P9O14990 202 aa10.99□□□□□ -0.65
PTPN7-216ENST00000492977 TGFAP01135 160 aa10.99□□□□□ -0.65
PTPN7-216ENST00000492977 NBEAP1P0C6P0 100 aa10.99□□□□□ -0.65
PTPN7-216ENST00000492977 GP9P14770 177 aa10.99□□□□□ -0.65
PTPN7-216ENST00000492977 RPL35P42766 123 aaKnown RBP10.99□□□□□ -0.65
PTPN7-216ENST00000492977 PRSS57Q6UWY2 283 aa10.99□□□□□ -0.65
PTPN7-216ENST00000492977 C2CD4CQ8TF44 421 aa10.99□□□□□ -0.65
PTPN7-216ENST00000492977 RNF125Q96EQ8 232 aa10.99□□□□□ -0.65
PTPN7-216ENST00000492977 URGCP-MRPS24S4R325 110 aa10.99□□□□□ -0.65
PTPN7-216ENST00000492977 ASH1LQ9NR48 2969 aaKnown RBP10.99□□□□□ -0.65
PTPN7-216ENST00000492977 LINC01548A6NM66 108 aa10.99□□□□□ -0.65
PTPN7-216ENST00000492977 H3BUX3 64 aa10.99□□□□□ -0.65
PTPN7-216ENST00000492977 Q5PR19 223 aa10.99□□□□□ -0.65
PTPN7-216ENST00000492977 NECAP1Q8NC96 275 aa10.99□□□□□ -0.65
PTPN7-216ENST00000492977 SHANK2-AS3Q9BTD1 123 aa10.99□□□□□ -0.65
PTPN7-216ENST00000492977 ELOVL1Q9BW60 279 aa10.99□□□□□ -0.65
PTPN7-216ENST00000492977 GAR1Q9NY12 217 aaKnown RBP10.99□□□□□ -0.65
PTPN7-216ENST00000492977 RNF24Q9Y225 148 aa10.99□□□□□ -0.65
PTPN7-216ENST00000492977 S4R3C0 116 aa10.99□□□□□ -0.65
PTPN7-216ENST00000492977 SH2D7A6NKC9 451 aaPredicted RBP10.98□□□□□ -0.65
PTPN7-216ENST00000492977 G3V318 75 aa10.98□□□□□ -0.65
PTPN7-216ENST00000492977 H3BRN7 92 aa10.98□□□□□ -0.65
PTPN7-216ENST00000492977 PF4P02776 101 aa10.98□□□□□ -0.65
PTPN7-216ENST00000492977 IL4P05112 153 aa10.98□□□□□ -0.65
PTPN7-216ENST00000492977 MYCNOSP40205 109 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms