RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 PRR20AP86496 221 aa17.02■□□□□ 0.32
PSPC1-204ENST00000492741 RELQ04864 619 aaPredicted RBP17.02■□□□□ 0.32
PSPC1-204ENST00000492741 ACOT6Q3I5F7 207 aaPredicted RBP17.02■□□□□ 0.32
PSPC1-204ENST00000492741 PRIMA1Q86XR5 153 aa17.02■□□□□ 0.32
PSPC1-204ENST00000492741 OR51G1Q8NGK1 321 aa17.02■□□□□ 0.32
PSPC1-204ENST00000492741 MBP02144 154 aa17.01■□□□□ 0.31
PSPC1-204ENST00000492741 KLHL30-AS1Q8NEE0 82 aa17.01■□□□□ 0.31
PSPC1-204ENST00000492741 CITED2Q99967 270 aaPredicted RBP17.01■□□□□ 0.31
PSPC1-204ENST00000492741 JMJD1CQ15652 2540 aa17.01■□□□□ 0.31
PSPC1-204ENST00000492741 A0A1W2PRX2 142 aa17.01■□□□□ 0.31
PSPC1-204ENST00000492741 UMAD1C9J7I0 102 aa17.01■□□□□ 0.31
PSPC1-204ENST00000492741 ORM2P19652 201 aa17.01■□□□□ 0.31
PSPC1-204ENST00000492741 LYZP61626 148 aa17.01■□□□□ 0.31
PSPC1-204ENST00000492741 ZNF600Q6ZNG1 722 aa17.01■□□□□ 0.31
PSPC1-204ENST00000492741 PBDC1Q9BVG4 233 aa17.01■□□□□ 0.31
PSPC1-204ENST00000492741 VSIRQ9H7M9 311 aa17.01■□□□□ 0.31
PSPC1-204ENST00000492741 DOK5Q9P104 306 aa17.01■□□□□ 0.31
PSPC1-204ENST00000492741 TSSC4Q9Y5U2 329 aaPredicted RBP17.01■□□□□ 0.31
PSPC1-204ENST00000492741 PUS1Q9Y606 427 aaKnown RBP eCLIP17.01■□□□□ 0.31
PSPC1-204ENST00000492741 GGCTO75223 188 aaKnown RBP17■□□□□ 0.31
PSPC1-204ENST00000492741 OR2C1O95371 312 aa17■□□□□ 0.31
PSPC1-204ENST00000492741 C18orf65Q6ZTR6 163 aa17■□□□□ 0.31
PSPC1-204ENST00000492741 ZNF767PQ75MW2 155 aa17■□□□□ 0.31
PSPC1-204ENST00000492741 OR1B1Q8NGR6 318 aa17■□□□□ 0.31
PSPC1-204ENST00000492741 C4orf3Q8WVX3 66 aa17■□□□□ 0.31
PSPC1-204ENST00000492741 PLA2G2EQ9NZK7 142 aa17■□□□□ 0.31
PSPC1-204ENST00000492741 C2CD3Q4AC94 2353 aa17■□□□□ 0.31
PSPC1-204ENST00000492741 IL4P05112 153 aa16.99■□□□□ 0.31
PSPC1-204ENST00000492741 OR5G3P0C626 314 aa16.99■□□□□ 0.31
PSPC1-204ENST00000492741 M6PRP20645 277 aa16.99■□□□□ 0.31
PSPC1-204ENST00000492741 SULT1A2P50226 295 aa16.99■□□□□ 0.31
PSPC1-204ENST00000492741 TMEM41BQ5BJD5 291 aa16.99■□□□□ 0.31
PSPC1-204ENST00000492741 OR10G4Q8NGN3 311 aa16.99■□□□□ 0.31
PSPC1-204ENST00000492741 OR10G9Q8NGN4 311 aa16.99■□□□□ 0.31
PSPC1-204ENST00000492741 OR10G7Q8NGN6 311 aa16.99■□□□□ 0.31
PSPC1-204ENST00000492741 RNF141Q8WVD5 230 aa16.99■□□□□ 0.31
PSPC1-204ENST00000492741 BMPR1BO00238 502 aa16.99■□□□□ 0.31
PSPC1-204ENST00000492741 COX7A2P2O60397 106 aa16.99■□□□□ 0.31
PSPC1-204ENST00000492741 RAB5CP51148 216 aa16.99■□□□□ 0.31
PSPC1-204ENST00000492741 RAB2AP61019 212 aa16.99■□□□□ 0.31
PSPC1-204ENST00000492741 GCSAMLQ5JQS6 135 aa16.99■□□□□ 0.31
PSPC1-204ENST00000492741 WFDC12Q8WWY7 111 aa16.99■□□□□ 0.31
PSPC1-204ENST00000492741 I3L521 148 aa16.98■□□□□ 0.31
PSPC1-204ENST00000492741 HSPB1P04792 205 aaKnown RBP16.98■□□□□ 0.31
PSPC1-204ENST00000492741 RPEL1Q2QD12 228 aa16.98■□□□□ 0.31
PSPC1-204ENST00000492741 KRTAP24-1Q3LI83 254 aa16.98■□□□□ 0.31
PSPC1-204ENST00000492741 AWAT1Q58HT5 328 aa16.98■□□□□ 0.31
PSPC1-204ENST00000492741 OR1L4Q8NGR5 311 aa16.98■□□□□ 0.31
PSPC1-204ENST00000492741 FAM213BQ8TBF2 198 aa16.98■□□□□ 0.31
PSPC1-204ENST00000492741 RPRMQ9NS64 109 aa16.98■□□□□ 0.31
PSPC1-204ENST00000492741 HYPMO75409 117 aa16.97■□□□□ 0.31
PSPC1-204ENST00000492741 RNF125Q96EQ8 232 aa16.97■□□□□ 0.31
PSPC1-204ENST00000492741 DNAJC4Q9NNZ3 241 aa16.97■□□□□ 0.31
PSPC1-204ENST00000492741 IGHV3OR16-8A0A075B7F1 116 aa16.96■□□□□ 0.31
PSPC1-204ENST00000492741 A0A1W2PPV4 95 aa16.96■□□□□ 0.31
PSPC1-204ENST00000492741 ZNF705EA8MWA4 302 aaPredicted RBP16.96■□□□□ 0.31
PSPC1-204ENST00000492741 FHITP49789 147 aa16.96■□□□□ 0.31
PSPC1-204ENST00000492741 DEFB136Q30KP8 78 aa16.96■□□□□ 0.31
PSPC1-204ENST00000492741 PXDC1Q5TGL8 231 aa16.96■□□□□ 0.31
PSPC1-204ENST00000492741 FAM122CQ6P4D5 195 aa16.96■□□□□ 0.31
PSPC1-204ENST00000492741 TOMM20LQ6UXN7 152 aa16.96■□□□□ 0.31
PSPC1-204ENST00000492741 DPF1Q92782 380 aa16.96■□□□□ 0.31
PSPC1-204ENST00000492741 PFDN5Q99471 154 aa16.96■□□□□ 0.31
PSPC1-204ENST00000492741 IGHV4OR15-8A0A075B7B6 117 aa16.96■□□□□ 0.3
PSPC1-204ENST00000492741 A0A087WW49 117 aa16.96■□□□□ 0.3
PSPC1-204ENST00000492741 ELOA3CA0A087WX78 387 aaPredicted RBP16.96■□□□□ 0.3
PSPC1-204ENST00000492741 C10orf113Q5VZT2 155 aa16.96■□□□□ 0.3
PSPC1-204ENST00000492741 C8orf86Q6ZUL3 223 aa16.96■□□□□ 0.3
PSPC1-204ENST00000492741 C20orf24Q9BUV8 137 aa16.96■□□□□ 0.3
PSPC1-204ENST00000492741 WI2-2373I1.2A0A1W2PRP0 233 aa16.95■□□□□ 0.3
PSPC1-204ENST00000492741 ZNF320A2RRD8 509 aa16.95■□□□□ 0.3
PSPC1-204ENST00000492741 PLP1P60201 277 aa16.95■□□□□ 0.3
PSPC1-204ENST00000492741 KRTAP10-3P60369 221 aa16.95■□□□□ 0.3
PSPC1-204ENST00000492741 RAB14P61106 215 aa16.95■□□□□ 0.3
PSPC1-204ENST00000492741 FAM106AQ4KMX7 169 aa16.95■□□□□ 0.3
PSPC1-204ENST00000492741 FAM78BQ5VT40 261 aa16.95■□□□□ 0.3
PSPC1-204ENST00000492741 OR11H1Q8NG94 326 aa16.95■□□□□ 0.3
PSPC1-204ENST00000492741 GATAD1Q8WUU5 269 aa16.95■□□□□ 0.3
PSPC1-204ENST00000492741 RCC1LQ96I51 464 aaKnown RBP16.95■□□□□ 0.3
PSPC1-204ENST00000492741 C19orf24Q9BVV8 132 aa16.95■□□□□ 0.3
PSPC1-204ENST00000492741 NDUFA4O00483 81 aa16.94■□□□□ 0.3
PSPC1-204ENST00000492741 RHOBP62745 196 aa16.94■□□□□ 0.3
PSPC1-204ENST00000492741 NSUN5P1Q3KNT7 163 aa16.94■□□□□ 0.3
PSPC1-204ENST00000492741 DPPA3Q6W0C5 159 aa16.94■□□□□ 0.3
PSPC1-204ENST00000492741 RPP25LQ8N5L8 163 aaKnown RBP16.94■□□□□ 0.3
PSPC1-204ENST00000492741 OR1N2Q8NGR9 330 aa16.94■□□□□ 0.3
PSPC1-204ENST00000492741 LRRC20Q8TCA0 184 aa16.94■□□□□ 0.3
PSPC1-204ENST00000492741 TMEM37Q8WXS4 190 aa16.94■□□□□ 0.3
PSPC1-204ENST00000492741 ACTR3CQ9C0K3 210 aaPredicted RBP16.94■□□□□ 0.3
PSPC1-204ENST00000492741 HIGD1AQ9Y241 93 aa16.94■□□□□ 0.3
PSPC1-204ENST00000492741 LINC01619G3V211 115 aa16.93■□□□□ 0.3
PSPC1-204ENST00000492741 ZP3P21754 424 aa16.93■□□□□ 0.3
PSPC1-204ENST00000492741 PCNPQ8WW12 178 aaKnown RBP16.93■□□□□ 0.3
PSPC1-204ENST00000492741 DUX3Q96PT4 197 aa16.93■□□□□ 0.3
PSPC1-204ENST00000492741 UHRF2Q96PU4 802 aa16.93■□□□□ 0.3
PSPC1-204ENST00000492741 SLC25A22Q9H936 323 aa16.93■□□□□ 0.3
PSPC1-204ENST00000492741 CDC34P49427 236 aaPredicted RBP16.93■□□□□ 0.3
PSPC1-204ENST00000492741 USF2Q15853 346 aaPredicted RBP16.93■□□□□ 0.3
PSPC1-204ENST00000492741 PATE2Q6UY27 113 aa16.93■□□□□ 0.3
PSPC1-204ENST00000492741 LINC00305Q7Z4B0 112 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms