RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 OR13C8Q8NGS7 320 aa6.85□□□□□ -1.31
HDAC3-212ENST00000492407 GGTLC1Q9BX51 225 aa6.85□□□□□ -1.31
HDAC3-212ENST00000492407 MRPL27Q9P0M9 148 aaKnown RBP6.85□□□□□ -1.31
HDAC3-212ENST00000492407 TP53TG1Q9Y2A0 90 aa6.85□□□□□ -1.31
HDAC3-212ENST00000492407 UFC1Q9Y3C8 167 aa6.85□□□□□ -1.31
HDAC3-212ENST00000492407 PLECQ15149 4684 aaKnown RBP6.84□□□□□ -1.31
HDAC3-212ENST00000492407 TRAV26-1A0A087WT03 109 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 LOC102724200A0A096LPH7 203 aaPredicted RBP6.84□□□□□ -1.31
HDAC3-212ENST00000492407 IGKV1D-13A0A0B4J2D9 117 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 F6UZH7 168 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 EREGO14944 169 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 TOMM40O96008 361 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 MT-CO2P00403 227 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 HPRT1P00492 218 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 MT-ND4LP03901 98 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 IGKV1-13P0DP09 117 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 DEFA4P12838 97 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 MYOD1P15172 320 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 ID1P41134 155 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 MFAP4P55083 255 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 TAS2R31P59538 309 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 RBMS2Q15434 407 aaKnown RBP6.84□□□□□ -1.31
HDAC3-212ENST00000492407 TMEM241Q24JQ0 296 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 RNF151Q2KHN1 245 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 AKR1C8PQ5T2L2 129 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 C22orf42Q6IC83 251 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 CLEC19AQ6UXS0 136 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 Q6ZWC4 215 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 NR2C2APQ86WQ0 139 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 TMEM61Q8N0U2 210 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 VN1R17PQ8TDU5 208 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 RXFP4Q8TDU9 374 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 FCGR1BQ92637 280 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 PTH2Q96A98 100 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 RPUSD4Q96CM3 377 aaKnown RBP6.84□□□□□ -1.31
HDAC3-212ENST00000492407 WDR89Q96FK6 387 aaPredicted RBP6.84□□□□□ -1.31
HDAC3-212ENST00000492407 CCDC140Q96MF4 163 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 ATG101Q9BSB4 218 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 C5orf66Q9H5L9 145 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 WFDC1Q9HC57 220 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 RETNQ9HD89 108 aa6.84□□□□□ -1.31
HDAC3-212ENST00000492407 CARHSP1Q9Y2V2 147 aaKnown RBP6.84□□□□□ -1.31
HDAC3-212ENST00000492407 A0A1B0GW64 132 aa6.83□□□□□ -1.32
HDAC3-212ENST00000492407 E7EUB6 86 aa6.83□□□□□ -1.32
HDAC3-212ENST00000492407 SSNA1O43805 119 aa6.83□□□□□ -1.32
HDAC3-212ENST00000492407 HLA-AP01891 365 aaKnown RBP6.83□□□□□ -1.32
HDAC3-212ENST00000492407 OR2B8PP59922 312 aa6.83□□□□□ -1.32
HDAC3-212ENST00000492407 ERVFC1-1P60608 527 aa6.83□□□□□ -1.32
HDAC3-212ENST00000492407 CATR1Q13166 79 aa6.83□□□□□ -1.32
HDAC3-212ENST00000492407 PEA15Q15121 130 aa6.83□□□□□ -1.32
HDAC3-212ENST00000492407 CTF1Q16619 201 aa6.83□□□□□ -1.32
HDAC3-212ENST00000492407 OCIAD2Q56VL3 154 aa6.83□□□□□ -1.32
HDAC3-212ENST00000492407 COL5A1-AS1Q5SY13 56 aa6.83□□□□□ -1.32
HDAC3-212ENST00000492407 HOGA1Q86XE5 327 aa6.83□□□□□ -1.32
HDAC3-212ENST00000492407 VKORC1L1Q8N0U8 176 aa6.83□□□□□ -1.32
HDAC3-212ENST00000492407 ZNF502Q8TBZ5 544 aa6.83□□□□□ -1.32
HDAC3-212ENST00000492407 NUDCD2Q8WVJ2 157 aa6.83□□□□□ -1.32
HDAC3-212ENST00000492407 SPAG8Q99932 426 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-212ENST00000492407 OVOL2Q9BRP0 275 aa6.83□□□□□ -1.32
HDAC3-212ENST00000492407 SLIRPQ9GZT3 109 aaKnown RBP6.83□□□□□ -1.32
HDAC3-212ENST00000492407 PLEKHA2Q9HB19 425 aa6.83□□□□□ -1.32
HDAC3-212ENST00000492407 TXNL4BQ9NX01 149 aaKnown RBP6.83□□□□□ -1.32
HDAC3-212ENST00000492407 ETV7Q9Y603 341 aa6.83□□□□□ -1.32
HDAC3-212ENST00000492407 KIR2DL5BA0A0G2JN68 375 aa6.82□□□□□ -1.32
HDAC3-212ENST00000492407 KIR2DL5BA0A0G2JPC4 375 aa6.82□□□□□ -1.32
HDAC3-212ENST00000492407 TMEM235A6NFC5 223 aa6.82□□□□□ -1.32
HDAC3-212ENST00000492407 PET100P0DJ07 73 aa6.82□□□□□ -1.32
HDAC3-212ENST00000492407 AKR1C4P17516 323 aa6.82□□□□□ -1.32
HDAC3-212ENST00000492407 F2RP25116 425 aa6.82□□□□□ -1.32
HDAC3-212ENST00000492407 S100GP29377 79 aa6.82□□□□□ -1.32
HDAC3-212ENST00000492407 FCGR2CP31995 323 aa6.82□□□□□ -1.32
HDAC3-212ENST00000492407 APOC4P55056 127 aa6.82□□□□□ -1.32
HDAC3-212ENST00000492407 CMC4P56277 68 aaPredicted RBP6.82□□□□□ -1.32
HDAC3-212ENST00000492407 SURF2Q15527 256 aaPredicted RBP6.82□□□□□ -1.32
HDAC3-212ENST00000492407 TIMM50Q3ZCQ8 353 aa6.82□□□□□ -1.32
HDAC3-212ENST00000492407 EIF5AL1Q6IS14 154 aaKnown RBP6.82□□□□□ -1.32
HDAC3-212ENST00000492407 STEAP1BQ6NZ63 245 aa6.82□□□□□ -1.32
HDAC3-212ENST00000492407 SPSB3Q6PJ21 355 aa6.82□□□□□ -1.32
HDAC3-212ENST00000492407 KIR2DL5AQ8N109 375 aa6.82□□□□□ -1.32
HDAC3-212ENST00000492407 BEST4Q8NFU0 473 aa6.82□□□□□ -1.32
HDAC3-212ENST00000492407 OR1L6Q8NGR2 347 aa6.82□□□□□ -1.32
HDAC3-212ENST00000492407 KIR2DL5BQ8NHK3 375 aa6.82□□□□□ -1.32
HDAC3-212ENST00000492407 MCFD2Q8NI22 146 aa6.82□□□□□ -1.32
HDAC3-212ENST00000492407 MARCH1Q8TCQ1 289 aa6.82□□□□□ -1.32
HDAC3-212ENST00000492407 C2CD4CQ8TF44 421 aa6.82□□□□□ -1.32
HDAC3-212ENST00000492407 SDHCQ99643 169 aaPredicted RBP6.82□□□□□ -1.32
HDAC3-212ENST00000492407 ACTR3CQ9C0K3 210 aaPredicted RBP6.82□□□□□ -1.32
HDAC3-212ENST00000492407 COMMD5Q9GZQ3 224 aa6.82□□□□□ -1.32
HDAC3-212ENST00000492407 NAA50Q9GZZ1 169 aaKnown RBP6.82□□□□□ -1.32
HDAC3-212ENST00000492407 SMCO4Q9NRQ5 59 aa6.82□□□□□ -1.32
HDAC3-212ENST00000492407 TAS2R8Q9NYW2 309 aa6.82□□□□□ -1.32
HDAC3-212ENST00000492407 IGLC7A0M8Q6 106 aa6.81□□□□□ -1.32
HDAC3-212ENST00000492407 NUPR2A6NF83 97 aa6.81□□□□□ -1.32
HDAC3-212ENST00000492407 CGB1A6NKQ9 187 aa6.81□□□□□ -1.32
HDAC3-212ENST00000492407 COLCA2A8K830 154 aa6.81□□□□□ -1.32
HDAC3-212ENST00000492407 K7EMT4 169 aa6.81□□□□□ -1.32
HDAC3-212ENST00000492407 UPK2O00526 184 aa6.81□□□□□ -1.32
HDAC3-212ENST00000492407 SIVA1O15304 175 aa6.81□□□□□ -1.32
HDAC3-212ENST00000492407 PPYP01298 95 aa6.81□□□□□ -1.32
HDAC3-212ENST00000492407 NMBP08949 121 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms