RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 ZFYVE26Q68DK2 2539 aa12.28□□□□□ -0.44
TNFRSF1B-203ENST00000492361 LOC389332A0A1B0GUA5 103 aa12.28□□□□□ -0.44
TNFRSF1B-203ENST00000492361 GRNP28799 593 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1B-203ENST00000492361 GUSBP1Q15486 140 aa12.28□□□□□ -0.44
TNFRSF1B-203ENST00000492361 SFXN3Q9BWM7 321 aa12.28□□□□□ -0.44
TNFRSF1B-203ENST00000492361 LHBP01229 141 aa12.28□□□□□ -0.44
TNFRSF1B-203ENST00000492361 FXYD7P58549 80 aa12.28□□□□□ -0.44
TNFRSF1B-203ENST00000492361 FAM57AQ8TBR7 257 aa12.28□□□□□ -0.44
TNFRSF1B-203ENST00000492361 OR8B2Q96RD0 313 aa12.28□□□□□ -0.44
TNFRSF1B-203ENST00000492361 CTSZQ9UBR2 303 aa12.28□□□□□ -0.44
TNFRSF1B-203ENST00000492361 HYPMO75409 117 aa12.28□□□□□ -0.44
TNFRSF1B-203ENST00000492361 P01737 135 aa12.28□□□□□ -0.44
TNFRSF1B-203ENST00000492361 CIARTQ8N365 385 aaPredicted RBP12.28□□□□□ -0.44
TNFRSF1B-203ENST00000492361 IGHV1-69-2A0A0G2JMI3 117 aa12.27□□□□□ -0.44
TNFRSF1B-203ENST00000492361 PRSS46E5RG02 174 aa12.27□□□□□ -0.44
TNFRSF1B-203ENST00000492361 DMRTA1Q5VZB9 504 aa12.27□□□□□ -0.44
TNFRSF1B-203ENST00000492361 IGFL4Q6B9Z1 124 aa12.27□□□□□ -0.44
TNFRSF1B-203ENST00000492361 VSTM2AQ8TAG5 236 aa12.27□□□□□ -0.44
TNFRSF1B-203ENST00000492361 TP53TG3Q9ULZ0 132 aa12.27□□□□□ -0.44
TNFRSF1B-203ENST00000492361 TYMSP04818 313 aa12.27□□□□□ -0.45
TNFRSF1B-203ENST00000492361 CD99P14209 185 aa12.27□□□□□ -0.45
TNFRSF1B-203ENST00000492361 OSR1Q8TAX0 266 aaPredicted RBP12.27□□□□□ -0.45
TNFRSF1B-203ENST00000492361 RNASE6Q93091 150 aaKnown RBP12.27□□□□□ -0.45
TNFRSF1B-203ENST00000492361 DIRC2Q96SL1 478 aa12.27□□□□□ -0.45
TNFRSF1B-203ENST00000492361 IGHV3-49A0A0A0MS15 119 aa12.27□□□□□ -0.45
TNFRSF1B-203ENST00000492361 AMY1AP04745 511 aa12.27□□□□□ -0.45
TNFRSF1B-203ENST00000492361 KLRD1Q13241 179 aa12.27□□□□□ -0.45
TNFRSF1B-203ENST00000492361 SSX8Q7RTT4 187 aa12.27□□□□□ -0.45
TNFRSF1B-203ENST00000492361 HIVEP3Q5T1R4 2406 aa12.26□□□□□ -0.45
TNFRSF1B-203ENST00000492361 POLQO75417 2590 aa12.26□□□□□ -0.45
TNFRSF1B-203ENST00000492361 TMEM178BH3BS89 294 aa12.26□□□□□ -0.45
TNFRSF1B-203ENST00000492361 BMPR1BO00238 502 aa12.26□□□□□ -0.45
TNFRSF1B-203ENST00000492361 WDR73Q6P4I2 378 aa12.26□□□□□ -0.45
TNFRSF1B-203ENST00000492361 TXNDC17Q9BRA2 123 aa12.26□□□□□ -0.45
TNFRSF1B-203ENST00000492361 SLC25A2Q9BXI2 301 aa12.26□□□□□ -0.45
TNFRSF1B-203ENST00000492361 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.26□□□□□ -0.45
TNFRSF1B-203ENST00000492361 PAFAH1B2P68402 229 aa12.26□□□□□ -0.45
TNFRSF1B-203ENST00000492361 Q6ZS92 163 aa12.26□□□□□ -0.45
TNFRSF1B-203ENST00000492361 RNASEH2CQ8TDP1 164 aaKnown RBP12.26□□□□□ -0.45
TNFRSF1B-203ENST00000492361 IGLV3-9A0A075B6K5 115 aa12.25□□□□□ -0.45
TNFRSF1B-203ENST00000492361 CGB1A6NKQ9 187 aa12.25□□□□□ -0.45
TNFRSF1B-203ENST00000492361 TCF21O43680 179 aa12.25□□□□□ -0.45
TNFRSF1B-203ENST00000492361 FCGR2BP31994 310 aaPredicted RBP12.25□□□□□ -0.45
TNFRSF1B-203ENST00000492361 PPOXP50336 477 aa12.25□□□□□ -0.45
TNFRSF1B-203ENST00000492361 TBR1Q16650 682 aa12.25□□□□□ -0.45
TNFRSF1B-203ENST00000492361 C1orf194Q5T5A4 169 aa12.25□□□□□ -0.45
TNFRSF1B-203ENST00000492361 RASL11BQ9BPW5 248 aa12.25□□□□□ -0.45
TNFRSF1B-203ENST00000492361 IGHV3-66A0A0C4DH42 116 aa12.25□□□□□ -0.45
TNFRSF1B-203ENST00000492361 NUP35Q8NFH5 326 aa12.25□□□□□ -0.45
TNFRSF1B-203ENST00000492361 PERPQ96FX8 193 aa12.25□□□□□ -0.45
TNFRSF1B-203ENST00000492361 NGBQ9NPG2 151 aa12.25□□□□□ -0.45
TNFRSF1B-203ENST00000492361 PPIAL4CA0A0B4J2A2 164 aa12.25□□□□□ -0.45
TNFRSF1B-203ENST00000492361 A0A1W2PS18 150 aa12.25□□□□□ -0.45
TNFRSF1B-203ENST00000492361 CD3EP07766 207 aa12.25□□□□□ -0.45
TNFRSF1B-203ENST00000492361 C3orf79P0CE67 100 aa12.25□□□□□ -0.45
TNFRSF1B-203ENST00000492361 PPIAL4GP0DN37 164 aa12.25□□□□□ -0.45
TNFRSF1B-203ENST00000492361 C2orf83Q53S99 150 aa12.25□□□□□ -0.45
TNFRSF1B-203ENST00000492361 PATE2Q6UY27 113 aa12.25□□□□□ -0.45
TNFRSF1B-203ENST00000492361 RNF2Q99496 336 aa12.25□□□□□ -0.45
TNFRSF1B-203ENST00000492361 J3KRW8 73 aa12.24□□□□□ -0.45
TNFRSF1B-203ENST00000492361 GPX1P07203 203 aa12.24□□□□□ -0.45
TNFRSF1B-203ENST00000492361 CX3CL1P78423 397 aa12.24□□□□□ -0.45
TNFRSF1B-203ENST00000492361 WFDC3Q8IUB2 231 aa12.24□□□□□ -0.45
TNFRSF1B-203ENST00000492361 C11orf42Q8N5U0 333 aa12.24□□□□□ -0.45
TNFRSF1B-203ENST00000492361 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.24□□□□□ -0.45
TNFRSF1B-203ENST00000492361 M0R3E3 92 aa12.24□□□□□ -0.45
TNFRSF1B-203ENST00000492361 RPLP1P05386 114 aaKnown RBP12.24□□□□□ -0.45
TNFRSF1B-203ENST00000492361 CGB3P0DN86 165 aa12.24□□□□□ -0.45
TNFRSF1B-203ENST00000492361 CGB7P0DN87 165 aa12.24□□□□□ -0.45
TNFRSF1B-203ENST00000492361 HTR1DP28221 377 aa12.24□□□□□ -0.45
TNFRSF1B-203ENST00000492361 TMEM136Q6ZRR5 245 aa12.24□□□□□ -0.45
TNFRSF1B-203ENST00000492361 PIP4P1Q86T03 277 aa12.24□□□□□ -0.45
TNFRSF1B-203ENST00000492361 SRSF12Q8WXF0 261 aaKnown RBP12.24□□□□□ -0.45
TNFRSF1B-203ENST00000492361 NDUFA4L2Q9NRX3 87 aa12.24□□□□□ -0.45
TNFRSF1B-203ENST00000492361 LOC102724200A0A096LPH7 203 aaPredicted RBP12.24□□□□□ -0.45
TNFRSF1B-203ENST00000492361 E7EQL1 145 aa12.24□□□□□ -0.45
TNFRSF1B-203ENST00000492361 NUTF2P61970 127 aaKnown RBP12.24□□□□□ -0.45
TNFRSF1B-203ENST00000492361 Q71RC1 249 aaPredicted RBP12.24□□□□□ -0.45
TNFRSF1B-203ENST00000492361 MUC15Q8N387 334 aa12.24□□□□□ -0.45
TNFRSF1B-203ENST00000492361 PRSS33Q8NF86 280 aa12.24□□□□□ -0.45
TNFRSF1B-203ENST00000492361 C17orf77Q96MU5 243 aa12.24□□□□□ -0.45
TNFRSF1B-203ENST00000492361 BET1LQ9NYM9 111 aa12.24□□□□□ -0.45
TNFRSF1B-203ENST00000492361 TCRBV4S1A1TA0A5B7 111 aa12.23□□□□□ -0.45
TNFRSF1B-203ENST00000492361 TNRC6BQ9UPQ9 1833 aaKnown RBP12.23□□□□□ -0.45
TNFRSF1B-203ENST00000492361 ZNF324O75467 553 aaPredicted RBP12.23□□□□□ -0.45
TNFRSF1B-203ENST00000492361 HLA-DQA1P01909 254 aa12.23□□□□□ -0.45
TNFRSF1B-203ENST00000492361 Q9H3A6 140 aa12.23□□□□□ -0.45
TNFRSF1B-203ENST00000492361 MYO9AB2RTY4 2548 aa12.23□□□□□ -0.45
TNFRSF1B-203ENST00000492361 FAM90A9PA6NNJ1 464 aa12.23□□□□□ -0.45
TNFRSF1B-203ENST00000492361 HIST1H1EP10412 219 aaKnown RBP12.23□□□□□ -0.45
TNFRSF1B-203ENST00000492361 PSG1P11464 419 aa12.23□□□□□ -0.45
TNFRSF1B-203ENST00000492361 COA6Q5JTJ3 125 aaKnown RBP12.23□□□□□ -0.45
TNFRSF1B-203ENST00000492361 ZNF257Q9Y2Q1 563 aa12.23□□□□□ -0.45
TNFRSF1B-203ENST00000492361 IL4P05112 153 aa12.22□□□□□ -0.45
TNFRSF1B-203ENST00000492361 IGHV1-8P0DP01 117 aa12.22□□□□□ -0.45
TNFRSF1B-203ENST00000492361 EPDR1Q9UM22 224 aa12.22□□□□□ -0.45
TNFRSF1B-203ENST00000492361 IGKV3-7A0A075B6H7 116 aa12.22□□□□□ -0.45
TNFRSF1B-203ENST00000492361 A0A1W2PRE2 83 aa12.22□□□□□ -0.45
TNFRSF1B-203ENST00000492361 CFHR2P36980 270 aa12.22□□□□□ -0.45
TNFRSF1B-203ENST00000492361 YPEL3P61236 119 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms