RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.92□□□□□ -0.824e-11■■■■■ 27.5
HMGN1-220ENST00000492280 TRAV8-1A0A0A6YYK1 113 aa9.92□□□□□ -0.82
HMGN1-220ENST00000492280 BPIFB3P59826 476 aa9.92□□□□□ -0.82
HMGN1-220ENST00000492280 HES1Q14469 280 aa9.92□□□□□ -0.82
HMGN1-220ENST00000492280 RNF114Q9Y508 228 aa9.92□□□□□ -0.82
HMGN1-220ENST00000492280 A0A1W2PRE2 83 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 CNIH1O95406 144 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 SCGB1D1O95968 90 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 RBP4P02753 201 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 LGALS7P47929 136 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 KLRB1Q12918 225 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 SSX2Q16385 188 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 FAM71F2Q6NXP2 309 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 BCL6BQ8N143 479 aaPredicted RBP9.91□□□□□ -0.82
HMGN1-220ENST00000492280 OR8B3Q8NGG8 313 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 OR4A5Q8NH83 315 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 TMEM18Q96B42 140 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 OR8B2Q96RD0 313 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 ABCA2Q9BZC7 2435 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 PEX7O00628 323 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 SLC25A5P05141 298 aaKnown RBP9.91□□□□□ -0.82
HMGN1-220ENST00000492280 PRRX1P54821 245 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 MRPL32Q9BYC8 188 aaKnown RBP9.91□□□□□ -0.82
HMGN1-220ENST00000492280 IGSF10Q6WRI0 2623 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 PGPA6NDG6 321 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 CRYGBP07316 175 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 CRISP2P16562 243 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 DEFA6Q01524 100 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 THAP8Q8NA92 274 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 CMTM2Q8TAZ6 248 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 C14orf144Q96I85 54 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 BTF3L4Q96K17 158 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 RCHY1Q96PM5 261 aa9.91□□□□□ -0.82
HMGN1-220ENST00000492280 IGHV3-23P01764 117 aa9.9□□□□□ -0.82
HMGN1-220ENST00000492280 DDTP30046 118 aa9.9□□□□□ -0.82
HMGN1-220ENST00000492280 BAGE2Q86Y30 109 aa9.9□□□□□ -0.82
HMGN1-220ENST00000492280 C8orf31Q8N9H6 132 aa9.9□□□□□ -0.82
HMGN1-220ENST00000492280 SSBP4Q9BWG4 385 aaPredicted RBP9.9□□□□□ -0.82
HMGN1-220ENST00000492280 CSPG4Q6UVK1 2322 aa9.9□□□□□ -0.83
HMGN1-220ENST00000492280 IGHV3OR16-8A0A075B7F1 116 aa9.9□□□□□ -0.83
HMGN1-220ENST00000492280 A6NNC1 897 aa9.9□□□□□ -0.83
HMGN1-220ENST00000492280 GCGP01275 180 aa9.9□□□□□ -0.83
HMGN1-220ENST00000492280 PSG1P11464 419 aa9.9□□□□□ -0.83
HMGN1-220ENST00000492280 YPEL3P61236 119 aaPredicted RBP9.9□□□□□ -0.83
HMGN1-220ENST00000492280 BAGE3Q86Y29 109 aa9.9□□□□□ -0.83
HMGN1-220ENST00000492280 DYNAPQ8N1N2 210 aa9.9□□□□□ -0.83
HMGN1-220ENST00000492280 TEX45Q8NA69 505 aa9.9□□□□□ -0.83
HMGN1-220ENST00000492280 OR1L4Q8NGR5 311 aa9.9□□□□□ -0.83
HMGN1-220ENST00000492280 WNT10AQ9GZT5 417 aa9.9□□□□□ -0.83
HMGN1-220ENST00000492280 ZANQ9Y493 2812 aa9.89□□□□□ -0.83
HMGN1-220ENST00000492280 IQCJQ1A5X6 159 aa9.89□□□□□ -0.83
HMGN1-220ENST00000492280 TDRG1Q3Y452 100 aa9.89□□□□□ -0.83
HMGN1-220ENST00000492280 LINC00322Q6ZN03 302 aaPredicted RBP9.89□□□□□ -0.83
HMGN1-220ENST00000492280 SSX8Q7RTT4 187 aa9.89□□□□□ -0.83
HMGN1-220ENST00000492280 EXOC3-AS1Q8N2X6 119 aa9.89□□□□□ -0.83
HMGN1-220ENST00000492280 GNB4Q9HAV0 340 aa9.89□□□□□ -0.83
HMGN1-220ENST00000492280 F11RQ9Y624 299 aaKnown RBP9.89□□□□□ -0.83
HMGN1-220ENST00000492280 INS-IGF2F8WCM5 200 aa9.89□□□□□ -0.83
HMGN1-220ENST00000492280 LIPFP07098 398 aa9.89□□□□□ -0.83
HMGN1-220ENST00000492280 UCNP55089 124 aa9.89□□□□□ -0.83
HMGN1-220ENST00000492280 Q6ZWC4 215 aa9.89□□□□□ -0.83
HMGN1-220ENST00000492280 C17orf77Q96MU5 243 aa9.89□□□□□ -0.83
HMGN1-220ENST00000492280 MS4A10Q96PG2 267 aa9.89□□□□□ -0.83
HMGN1-220ENST00000492280 FAM208BQ5VWN6 2430 aa9.88□□□□□ -0.83
HMGN1-220ENST00000492280 TSTD3H0UI37 97 aa9.88□□□□□ -0.83
HMGN1-220ENST00000492280 CRYGCP07315 174 aa9.88□□□□□ -0.83
HMGN1-220ENST00000492280 GPR6P46095 362 aaPredicted RBP9.88□□□□□ -0.83
HMGN1-220ENST00000492280 UQCRFS1P47985 274 aa9.88□□□□□ -0.83
HMGN1-220ENST00000492280 ATP5IP56385 69 aaPredicted RBP9.88□□□□□ -0.83
HMGN1-220ENST00000492280 SLAQ13239 276 aa9.88□□□□□ -0.83
HMGN1-220ENST00000492280 USP9YO00507 2555 aaPredicted RBP9.88□□□□□ -0.83
HMGN1-220ENST00000492280 IGHV3-35A0A0C4DH35 117 aa9.88□□□□□ -0.83
HMGN1-220ENST00000492280 NBEAP1P0C6P0 100 aa9.88□□□□□ -0.83
HMGN1-220ENST00000492280 SRIP30626 198 aa9.88□□□□□ -0.83
HMGN1-220ENST00000492280 CAMPP49913 170 aa9.88□□□□□ -0.83
HMGN1-220ENST00000492280 NUDT10Q8NFP7 164 aa9.88□□□□□ -0.83
HMGN1-220ENST00000492280 C22orf15Q8WYQ4 148 aa9.88□□□□□ -0.83
HMGN1-220ENST00000492280 NUDT11Q96G61 164 aa9.88□□□□□ -0.83
HMGN1-220ENST00000492280 C19orf24Q9BVV8 132 aa9.88□□□□□ -0.83
HMGN1-220ENST00000492280 CDC42EP3Q9UKI2 254 aa9.88□□□□□ -0.83
HMGN1-220ENST00000492280 HYPMO75409 117 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 IGLC1P0CG04 106 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 GP9P14770 177 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 PMCHP20382 165 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 PKIAP61925 76 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 UBE2G1P62253 170 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 CX3CL1P78423 397 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 NDPQ00604 133 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 TMEM136Q6ZRR5 245 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 TCF24Q7RTU0 167 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 OR5R1Q8NH85 324 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 PERPQ96FX8 193 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 HSPB9Q9BQS6 159 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 ZNF705FA8MVS1 300 aaPredicted RBP9.87□□□□□ -0.83
HMGN1-220ENST00000492280 VWC2LB2RUY7 222 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 ZNF705DP0CH99 300 aaPredicted RBP9.87□□□□□ -0.83
HMGN1-220ENST00000492280 ZNF705BP0CI00 300 aaPredicted RBP9.87□□□□□ -0.83
HMGN1-220ENST00000492280 ZFP36P26651 326 aaKnown RBP9.87□□□□□ -0.83
HMGN1-220ENST00000492280 HTR1DP28221 377 aa9.87□□□□□ -0.83
HMGN1-220ENST00000492280 SELENOTP62341 195 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms