RNA–Protein interactions for RNA: ENST00000491787.7

PBX3-209, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-209ENST00000491787 TMEM170AQ8WVE7 144 aa12.52□□□□□ -0.41
PBX3-209ENST00000491787 GLMPQ8WWB7 406 aa12.52□□□□□ -0.41
PBX3-209ENST00000491787 KRTAP17-1Q9BYP8 105 aa12.52□□□□□ -0.41
PBX3-209ENST00000491787 SEPSECSQ9HD40 501 aaKnown RBP12.52□□□□□ -0.41
PBX3-209ENST00000491787 X6R8D5 127 aa12.52□□□□□ -0.41
PBX3-209ENST00000491787 IGHV4-28A0A0C4DH34 117 aa12.51□□□□□ -0.41
PBX3-209ENST00000491787 ZNF688P0C7X2 276 aa12.51□□□□□ -0.41
PBX3-209ENST00000491787 EIF2B2P49770 351 aaKnown RBP12.51□□□□□ -0.41
PBX3-209ENST00000491787 PYDC2Q56P42 97 aa12.51□□□□□ -0.41
PBX3-209ENST00000491787 TMEM128Q5BJH2 165 aa12.51□□□□□ -0.41
PBX3-209ENST00000491787 TOMM5Q8N4H5 51 aa12.51□□□□□ -0.41
PBX3-209ENST00000491787 FAT2Q9NYQ8 4349 aa12.5□□□□□ -0.41
PBX3-209ENST00000491787 HELTA6NFD8 242 aa12.5□□□□□ -0.41
PBX3-209ENST00000491787 KNCNA6PVL3 124 aa12.5□□□□□ -0.41
PBX3-209ENST00000491787 IFNA10P01566 189 aa12.5□□□□□ -0.41
PBX3-209ENST00000491787 S100A5P33763 92 aa12.5□□□□□ -0.41
PBX3-209ENST00000491787 LYZL2Q7Z4W2 148 aa12.5□□□□□ -0.41
PBX3-209ENST00000491787 DTD1Q8TEA8 209 aa12.5□□□□□ -0.41
PBX3-209ENST00000491787 RAB40CQ96S21 281 aa12.5□□□□□ -0.41
PBX3-209ENST00000491787 SLC25A21Q9BQT8 299 aaPredicted RBP12.5□□□□□ -0.41
PBX3-209ENST00000491787 PRR13Q9NZ81 148 aa12.5□□□□□ -0.41
PBX3-209ENST00000491787 V9GYH0 126 aa12.5□□□□□ -0.41
PBX3-209ENST00000491787 ELOA3CA0A087WX78 387 aaPredicted RBP12.49□□□□□ -0.41
PBX3-209ENST00000491787 HNRNPCP07910 306 aaKnown RBP eCLIP12.49□□□□□ -0.41
PBX3-209ENST00000491787 AP2S1P53680 142 aaPredicted RBP12.49□□□□□ -0.41
PBX3-209ENST00000491787 RBKSQ9H477 322 aa12.49□□□□□ -0.41
PBX3-209ENST00000491787 DNAH2Q9P225 4427 aa12.49□□□□□ -0.41
PBX3-209ENST00000491787 IGLL5B9A064 214 aa12.48□□□□□ -0.41
PBX3-209ENST00000491787 ZNF701M0R085 212 aaPredicted RBP12.48□□□□□ -0.41
PBX3-209ENST00000491787 NXPH3O95157 252 aa12.48□□□□□ -0.41
PBX3-209ENST00000491787 TOMM40O96008 361 aa12.48□□□□□ -0.41
PBX3-209ENST00000491787 SLC25A6P12236 298 aa12.48□□□□□ -0.41
PBX3-209ENST00000491787 HLA-DMBP28068 263 aa12.48□□□□□ -0.41
PBX3-209ENST00000491787 ZNF79Q15937 498 aa12.48□□□□□ -0.41
PBX3-209ENST00000491787 ACTL10Q5JWF8 245 aa12.48□□□□□ -0.41
PBX3-209ENST00000491787 LRTM2Q8N967 370 aa12.48□□□□□ -0.41
PBX3-209ENST00000491787 NPIPB3Q92617 1050 aa12.48□□□□□ -0.41
PBX3-209ENST00000491787 CCDC160A6NGH7 325 aa12.47□□□□□ -0.41
PBX3-209ENST00000491787 BUB3O43684 328 aa12.47□□□□□ -0.41
PBX3-209ENST00000491787 PITX3O75364 302 aa12.47□□□□□ -0.41
PBX3-209ENST00000491787 IL4P05112 153 aa12.47□□□□□ -0.41
PBX3-209ENST00000491787 RD3LP0DJH9 198 aa12.47□□□□□ -0.41
PBX3-209ENST00000491787 GPX4P36969 197 aaPredicted RBP12.47□□□□□ -0.41
PBX3-209ENST00000491787 NUP62P37198 522 aaPredicted RBP12.47□□□□□ -0.41
PBX3-209ENST00000491787 DHRS2Q13268 280 aa12.47□□□□□ -0.41
PBX3-209ENST00000491787 USF2Q15853 346 aaPredicted RBP12.47□□□□□ -0.41
PBX3-209ENST00000491787 TMED4Q7Z7H5 227 aa12.47□□□□□ -0.41
PBX3-209ENST00000491787 CCDC190Q86UF4 302 aa12.47□□□□□ -0.41
PBX3-209ENST00000491787 OR1S1Q8NH92 325 aa12.47□□□□□ -0.41
PBX3-209ENST00000491787 ACY3Q96HD9 319 aa12.47□□□□□ -0.41
PBX3-209ENST00000491787 TBC1D24Q9ULP9 559 aa12.47□□□□□ -0.41
PBX3-209ENST00000491787 TRAV10A0A0B4J240 114 aa12.46□□□□□ -0.41
PBX3-209ENST00000491787 FAM90A26D6RGX4 464 aa12.46□□□□□ -0.41
PBX3-209ENST00000491787 Q6ZTC4 211 aa12.46□□□□□ -0.41
PBX3-209ENST00000491787 RBM38Q9H0Z9 239 aaKnown RBP12.46□□□□□ -0.41
PBX3-209ENST00000491787 KIAA1109Q2LD37 5005 aa12.45□□□□□ -0.42
PBX3-209ENST00000491787 H3BMM0 161 aa12.45□□□□□ -0.42
PBX3-209ENST00000491787 PSMG4Q5JS54 123 aa12.45□□□□□ -0.42
PBX3-209ENST00000491787 SPANXN2Q5MJ10 180 aa12.45□□□□□ -0.42
PBX3-209ENST00000491787 RNF126Q9BV68 326 aa12.45□□□□□ -0.42
PBX3-209ENST00000491787 CLEC5AQ9NY25 188 aa12.45□□□□□ -0.42
PBX3-209ENST00000491787 PFDN2Q9UHV9 154 aa12.45□□□□□ -0.42
PBX3-209ENST00000491787 TMED3Q9Y3Q3 217 aa12.45□□□□□ -0.42
PBX3-209ENST00000491787 FABP1P07148 127 aa12.44□□□□□ -0.42
PBX3-209ENST00000491787 PSG1P11464 419 aa12.44□□□□□ -0.42
PBX3-209ENST00000491787 VAMP1P23763 118 aa12.44□□□□□ -0.42
PBX3-209ENST00000491787 UBE2MP61081 183 aaKnown RBP12.44□□□□□ -0.42
PBX3-209ENST00000491787 C12orf74Q32Q52 190 aa12.44□□□□□ -0.42
PBX3-209ENST00000491787 OR8G2PQ6IF36 304 aa12.44□□□□□ -0.42
PBX3-209ENST00000491787 OR51G1Q8NGK1 321 aa12.44□□□□□ -0.42
PBX3-209ENST00000491787 SLC35E1Q96K37 410 aa12.44□□□□□ -0.42
PBX3-209ENST00000491787 NRN1Q9NPD7 142 aa12.44□□□□□ -0.42
PBX3-209ENST00000491787 PKHD1P08F94 4074 aa12.43□□□□□ -0.42
PBX3-209ENST00000491787 IGHV4-4A0A075B6R2 117 aa12.43□□□□□ -0.42
PBX3-209ENST00000491787 MED6O75586 246 aa12.43□□□□□ -0.42
PBX3-209ENST00000491787 SFT2D2O95562 160 aa12.43□□□□□ -0.42
PBX3-209ENST00000491787 SNRPD3P62318 126 aaKnown RBP12.43□□□□□ -0.42
PBX3-209ENST00000491787 RAB11AP62491 216 aa12.43□□□□□ -0.42
PBX3-209ENST00000491787 GAMTQ14353 236 aa12.43□□□□□ -0.42
PBX3-209ENST00000491787 CENPSQ8N2Z9 138 aa12.43□□□□□ -0.42
PBX3-209ENST00000491787 RNF125Q96EQ8 232 aa12.43□□□□□ -0.42
PBX3-209ENST00000491787 CIB3Q96Q77 187 aaPredicted RBP12.43□□□□□ -0.42
PBX3-209ENST00000491787 C1QTNF4Q9BXJ3 329 aa12.43□□□□□ -0.42
PBX3-209ENST00000491787 CELA1Q9UNI1 258 aa12.43□□□□□ -0.42
PBX3-209ENST00000491787 NKX2-1P43699 371 aaPredicted RBP12.42□□□□□ -0.42
PBX3-209ENST00000491787 NUTF2P61970 127 aaKnown RBP12.42□□□□□ -0.42
PBX3-209ENST00000491787 RPP30P78346 268 aaKnown RBP12.42□□□□□ -0.42
PBX3-209ENST00000491787 PPP1R1AQ13522 171 aa12.42□□□□□ -0.42
PBX3-209ENST00000491787 SIGLEC15Q6ZMC9 328 aa12.42□□□□□ -0.42
PBX3-209ENST00000491787 NEU1Q99519 415 aa12.42□□□□□ -0.42
PBX3-209ENST00000491787 SRRQ9GZT4 340 aa12.42□□□□□ -0.42
PBX3-209ENST00000491787 NAP1L6A6NFF2 107 aa12.41□□□□□ -0.42
PBX3-209ENST00000491787 ZFP92A6NM28 416 aa12.41□□□□□ -0.42
PBX3-209ENST00000491787 AMBPP02760 352 aa12.41□□□□□ -0.42
PBX3-209ENST00000491787 HLA-DRB4P13762 266 aa12.41□□□□□ -0.42
PBX3-209ENST00000491787 ZNF705AQ6ZN79 300 aaPredicted RBP12.41□□□□□ -0.42
PBX3-209ENST00000491787 CLUHP3Q96NS8 147 aa12.41□□□□□ -0.42
PBX3-209ENST00000491787 HLA-DRB4X5D2U9 266 aa12.41□□□□□ -0.42
PBX3-209ENST00000491787 IGKV1D-37A0A075B6S9 117 aa12.4□□□□□ -0.42
PBX3-209ENST00000491787 C1orf194Q5T5A4 169 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms