RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 DHRS2Q13268 280 aa11.14□□□□□ -0.63
USP39-217ENST00000491659 C4orf46Q504U0 113 aa11.14□□□□□ -0.63
USP39-217ENST00000491659 LYG2Q86SG7 212 aa11.14□□□□□ -0.63
USP39-217ENST00000491659 OR51G1Q8NGK1 321 aa11.14□□□□□ -0.63
USP39-217ENST00000491659 MAGT1Q9H0U3 335 aa11.14□□□□□ -0.63
USP39-217ENST00000491659 U3KQE9 123 aa11.14□□□□□ -0.63
USP39-217ENST00000491659 A0A1B0GVG6 124 aa11.13□□□□□ -0.63
USP39-217ENST00000491659 MPTX1A8MV57 137 aa11.13□□□□□ -0.63
USP39-217ENST00000491659 K7EQG2 157 aa11.13□□□□□ -0.63
USP39-217ENST00000491659 WRBO00258 174 aa11.13□□□□□ -0.63
USP39-217ENST00000491659 IFNA21P01568 189 aa11.13□□□□□ -0.63
USP39-217ENST00000491659 PSG1P11464 419 aa11.13□□□□□ -0.63
USP39-217ENST00000491659 NUP62P37198 522 aaPredicted RBP11.13□□□□□ -0.63
USP39-217ENST00000491659 AP2S1P53680 142 aaPredicted RBP11.13□□□□□ -0.63
USP39-217ENST00000491659 GAMTQ14353 236 aa11.13□□□□□ -0.63
USP39-217ENST00000491659 LEMD1Q68G75 181 aa11.13□□□□□ -0.63
USP39-217ENST00000491659 C16orf54Q6UWD8 224 aa11.13□□□□□ -0.63
USP39-217ENST00000491659 FAM24BQ8N5W8 94 aa11.13□□□□□ -0.63
USP39-217ENST00000491659 GLMPQ8WWB7 406 aa11.13□□□□□ -0.63
USP39-217ENST00000491659 RNF183Q96D59 192 aa11.13□□□□□ -0.63
USP39-217ENST00000491659 RNF125Q96EQ8 232 aa11.13□□□□□ -0.63
USP39-217ENST00000491659 CSTL1Q9H114 145 aa11.13□□□□□ -0.63
USP39-217ENST00000491659 PFDN2Q9UHV9 154 aa11.13□□□□□ -0.63
USP39-217ENST00000491659 PFDN1O60925 122 aa11.12□□□□□ -0.63
USP39-217ENST00000491659 ADAP1O75689 374 aa11.12□□□□□ -0.63
USP39-217ENST00000491659 ANXA7P20073 488 aaKnown RBP11.12□□□□□ -0.63
USP39-217ENST00000491659 STHQ8IWL8 128 aa11.12□□□□□ -0.63
USP39-217ENST00000491659 PBDC1Q9BVG4 233 aa11.12□□□□□ -0.63
USP39-217ENST00000491659 A0A0J9YWU9 116 aa11.11□□□□□ -0.63
USP39-217ENST00000491659 NKX2-1P43699 371 aaPredicted RBP11.11□□□□□ -0.63
USP39-217ENST00000491659 OXA1LQ15070 435 aa11.11□□□□□ -0.63
USP39-217ENST00000491659 SPANXN5Q5MJ07 72 aa11.11□□□□□ -0.63
USP39-217ENST00000491659 OR8G2PQ6IF36 304 aa11.11□□□□□ -0.63
USP39-217ENST00000491659 SIGLEC15Q6ZMC9 328 aa11.11□□□□□ -0.63
USP39-217ENST00000491659 DCANP1Q8TF63 244 aa11.11□□□□□ -0.63
USP39-217ENST00000491659 C20orf85Q9H1P6 137 aa11.11□□□□□ -0.63
USP39-217ENST00000491659 STRAPQ9Y3F4 350 aaKnown RBP11.11□□□□□ -0.63
USP39-217ENST00000491659 hCG_2014768A0A024R1R8 64 aa11.1□□□□□ -0.63
USP39-217ENST00000491659 IGKV1D-37A0A075B6S9 117 aa11.1□□□□□ -0.63
USP39-217ENST00000491659 H3BP45 60 aa11.1□□□□□ -0.63
USP39-217ENST00000491659 LYRM1O43325 122 aa11.1□□□□□ -0.63
USP39-217ENST00000491659 BUB3O43684 328 aa11.1□□□□□ -0.63
USP39-217ENST00000491659 PTTG1O95997 202 aa11.1□□□□□ -0.63
USP39-217ENST00000491659 CA1P00915 261 aaPredicted RBP11.1□□□□□ -0.63
USP39-217ENST00000491659 ZNF688P0C7X2 276 aa11.1□□□□□ -0.63
USP39-217ENST00000491659 LYZP61626 148 aa11.1□□□□□ -0.63
USP39-217ENST00000491659 IFITM3Q01628 133 aa11.1□□□□□ -0.63
USP39-217ENST00000491659 ZNF90Q03938 601 aa11.1□□□□□ -0.63
USP39-217ENST00000491659 GATAD1Q8WUU5 269 aa11.1□□□□□ -0.63
USP39-217ENST00000491659 PPP1R14BQ96C90 147 aa11.1□□□□□ -0.63
USP39-217ENST00000491659 TRGV9Q99603 122 aa11.1□□□□□ -0.63
USP39-217ENST00000491659 DYNC2H1Q8NCM8 4307 aaKnown RBP11.09□□□□□ -0.63
USP39-217ENST00000491659 LCE6AA0A183 80 aa11.09□□□□□ -0.63
USP39-217ENST00000491659 SNRPGP15A8MWD9 76 aa11.09□□□□□ -0.63
USP39-217ENST00000491659 SSSCA1O60232 199 aa11.09□□□□□ -0.63
USP39-217ENST00000491659 AKR1C1Q04828 323 aa11.09□□□□□ -0.63
USP39-217ENST00000491659 TMEM217Q8N7C4 229 aa11.09□□□□□ -0.63
USP39-217ENST00000491659 THAP8Q8NA92 274 aa11.09□□□□□ -0.63
USP39-217ENST00000491659 OR4D5Q8NGN0 318 aa11.09□□□□□ -0.63
USP39-217ENST00000491659 NRN1Q9NPD7 142 aa11.09□□□□□ -0.63
USP39-217ENST00000491659 CSMD3Q7Z407 3707 aa11.08□□□□□ -0.64
USP39-217ENST00000491659 PRSS46E5RG02 174 aa11.08□□□□□ -0.64
USP39-217ENST00000491659 PLA2G10O15496 165 aa11.08□□□□□ -0.64
USP39-217ENST00000491659 SCGB1D2O95969 90 aa11.08□□□□□ -0.64
USP39-217ENST00000491659 SNRPD3P62318 126 aaKnown RBP11.08□□□□□ -0.64
USP39-217ENST00000491659 POLR2GP62487 172 aaKnown RBP eCLIP11.08□□□□□ -0.64
USP39-217ENST00000491659 ID3Q02535 119 aa11.08□□□□□ -0.64
USP39-217ENST00000491659 OR2F1Q13607 317 aa11.08□□□□□ -0.64
USP39-217ENST00000491659 PSMG4Q5JS54 123 aa11.08□□□□□ -0.64
USP39-217ENST00000491659 ACOT7LQ6ZUV0 252 aa11.08□□□□□ -0.64
USP39-217ENST00000491659 PSENENQ9NZ42 101 aa11.08□□□□□ -0.64
USP39-217ENST00000491659 FBXL17Q9UF56 701 aa11.08□□□□□ -0.64
USP39-217ENST00000491659 CXorf65A6NEN9 183 aa11.07□□□□□ -0.64
USP39-217ENST00000491659 CFDP00746 253 aaPredicted RBP11.07□□□□□ -0.64
USP39-217ENST00000491659 SPP1P10451 314 aa11.07□□□□□ -0.64
USP39-217ENST00000491659 IAH1Q2TAA2 248 aaPredicted RBP11.07□□□□□ -0.64
USP39-217ENST00000491659 MZT2BQ6NZ67 158 aa11.07□□□□□ -0.64
USP39-217ENST00000491659 MORN3Q6PF18 240 aaPredicted RBP11.07□□□□□ -0.64
USP39-217ENST00000491659 TRPT1Q86TN4 253 aaKnown RBP11.07□□□□□ -0.64
USP39-217ENST00000491659 MITD1Q8WV92 249 aa11.07□□□□□ -0.64
USP39-217ENST00000491659 RARRES2Q99969 163 aa11.07□□□□□ -0.64
USP39-217ENST00000491659 TRAV6A0A075B6T7 132 aa11.06□□□□□ -0.64
USP39-217ENST00000491659 IGKV1OR2-108A0A075B7D4 117 aa11.06□□□□□ -0.64
USP39-217ENST00000491659 SMCO3A2RU48 225 aa11.06□□□□□ -0.64
USP39-217ENST00000491659 KNCNA6PVL3 124 aa11.06□□□□□ -0.64
USP39-217ENST00000491659 JTBO76095 146 aa11.06□□□□□ -0.64
USP39-217ENST00000491659 TCRBP04435 133 aa11.06□□□□□ -0.64
USP39-217ENST00000491659 ATF4P18848 351 aaPredicted RBP11.06□□□□□ -0.64
USP39-217ENST00000491659 PMS2P11Q13670 270 aa11.06□□□□□ -0.64
USP39-217ENST00000491659 TMEM41BQ5BJD5 291 aa11.06□□□□□ -0.64
USP39-217ENST00000491659 ACTL10Q5JWF8 245 aa11.06□□□□□ -0.64
USP39-217ENST00000491659 ZBTB8BQ8NAP8 495 aaPredicted RBP11.06□□□□□ -0.64
USP39-217ENST00000491659 BPIFCQ8NFQ6 507 aa11.06□□□□□ -0.64
USP39-217ENST00000491659 OR11H2Q8NH07 326 aa11.06□□□□□ -0.64
USP39-217ENST00000491659 SMIM8Q96KF7 97 aa11.06□□□□□ -0.64
USP39-217ENST00000491659 SEPSECSQ9HD40 501 aaKnown RBP11.06□□□□□ -0.64
USP39-217ENST00000491659 S100A7P31151 101 aa11.05□□□□□ -0.64
USP39-217ENST00000491659 BCAP31P51572 246 aa11.05□□□□□ -0.64
USP39-217ENST00000491659 ASAH1Q13510 395 aa11.05□□□□□ -0.64
USP39-217ENST00000491659 C1orf194Q5T5A4 169 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms