RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 FAM90A26D6RGX4 464 aa13.34□□□□□ -0.27
SMIM4-205ENST00000491607 BUB3O43684 328 aa13.34□□□□□ -0.27
SMIM4-205ENST00000491607 TNFSF8P32971 234 aa13.34□□□□□ -0.27
SMIM4-205ENST00000491607 SUPT4H1P63272 117 aaKnown RBP13.34□□□□□ -0.27
SMIM4-205ENST00000491607 SRPXP78539 464 aa13.34□□□□□ -0.27
SMIM4-205ENST00000491607 OR51G1Q8NGK1 321 aa13.34□□□□□ -0.27
SMIM4-205ENST00000491607 OR1S1Q8NH92 325 aa13.34□□□□□ -0.27
SMIM4-205ENST00000491607 MCFD2Q8NI22 146 aa13.34□□□□□ -0.27
SMIM4-205ENST00000491607 HRH4Q9H3N8 390 aa13.34□□□□□ -0.27
SMIM4-205ENST00000491607 TBC1D24Q9ULP9 559 aa13.34□□□□□ -0.27
SMIM4-205ENST00000491607 ZFP92A6NM28 416 aa13.33□□□□□ -0.28
SMIM4-205ENST00000491607 ZNF705EA8MWA4 302 aaPredicted RBP13.33□□□□□ -0.28
SMIM4-205ENST00000491607 C11orf94C9JXX5 98 aa13.33□□□□□ -0.28
SMIM4-205ENST00000491607 H3BMQ9 156 aa13.33□□□□□ -0.28
SMIM4-205ENST00000491607 HLA-DMBP28068 263 aa13.33□□□□□ -0.28
SMIM4-205ENST00000491607 TCTAP57738 103 aa13.33□□□□□ -0.28
SMIM4-205ENST00000491607 KLF9Q13886 244 aaPredicted RBP13.33□□□□□ -0.28
SMIM4-205ENST00000491607 TMED4Q7Z7H5 227 aa13.33□□□□□ -0.28
SMIM4-205ENST00000491607 RNF125Q96EQ8 232 aa13.33□□□□□ -0.28
SMIM4-205ENST00000491607 X6R8D5 127 aa13.33□□□□□ -0.28
SMIM4-205ENST00000491607 FAUP35544 74 aaKnown RBP13.32□□□□□ -0.28
SMIM4-205ENST00000491607 NUTF2P61970 127 aaKnown RBP13.32□□□□□ -0.28
SMIM4-205ENST00000491607 CSNK1G2-AS1Q8NCQ2 148 aa13.32□□□□□ -0.28
SMIM4-205ENST00000491607 SLC35E1Q96K37 410 aa13.32□□□□□ -0.28
SMIM4-205ENST00000491607 FRAS1Q86XX4 4008 aa13.31□□□□□ -0.28
SMIM4-205ENST00000491607 Q6ZTC4 211 aa13.31□□□□□ -0.28
SMIM4-205ENST00000491607 SOSTQ9BQB4 213 aa13.31□□□□□ -0.28
SMIM4-205ENST00000491607 C1QTNF4Q9BXJ3 329 aa13.31□□□□□ -0.28
SMIM4-205ENST00000491607 PFDN2Q9UHV9 154 aa13.31□□□□□ -0.28
SMIM4-205ENST00000491607 ELOA3CA0A087WX78 387 aaPredicted RBP13.3□□□□□ -0.28
SMIM4-205ENST00000491607 PIGBOS1A0A0B4J2F0 54 aa13.3□□□□□ -0.28
SMIM4-205ENST00000491607 NUP62P37198 522 aaPredicted RBP13.3□□□□□ -0.28
SMIM4-205ENST00000491607 PRR20EP86478 221 aa13.3□□□□□ -0.28
SMIM4-205ENST00000491607 PRR20CP86479 221 aa13.3□□□□□ -0.28
SMIM4-205ENST00000491607 PRR20DP86480 221 aa13.3□□□□□ -0.28
SMIM4-205ENST00000491607 PRR20BP86481 221 aa13.3□□□□□ -0.28
SMIM4-205ENST00000491607 PRR20AP86496 221 aa13.3□□□□□ -0.28
SMIM4-205ENST00000491607 ZNF90Q03938 601 aa13.3□□□□□ -0.28
SMIM4-205ENST00000491607 GAMTQ14353 236 aa13.3□□□□□ -0.28
SMIM4-205ENST00000491607 PYDC2Q56P42 97 aa13.3□□□□□ -0.28
SMIM4-205ENST00000491607 SEPSECSQ9HD40 501 aaKnown RBP13.3□□□□□ -0.28
SMIM4-205ENST00000491607 XCL2Q9UBD3 114 aa13.3□□□□□ -0.28
SMIM4-205ENST00000491607 PAIP2BQ9ULR5 123 aaKnown RBP13.3□□□□□ -0.28
SMIM4-205ENST00000491607 APLNQ9ULZ1 77 aa13.3□□□□□ -0.28
SMIM4-205ENST00000491607 TRAV10A0A0B4J240 114 aa13.29□□□□□ -0.28
SMIM4-205ENST00000491607 IAPPP10997 89 aa13.29□□□□□ -0.28
SMIM4-205ENST00000491607 VAMP1P23763 118 aa13.29□□□□□ -0.28
SMIM4-205ENST00000491607 GPX4P36969 197 aaPredicted RBP13.29□□□□□ -0.28
SMIM4-205ENST00000491607 ATP5IP56385 69 aaPredicted RBP13.29□□□□□ -0.28
SMIM4-205ENST00000491607 AP3S2P59780 193 aa13.29□□□□□ -0.28
SMIM4-205ENST00000491607 LYZP61626 148 aa13.29□□□□□ -0.28
SMIM4-205ENST00000491607 TOMM5Q8N4H5 51 aa13.29□□□□□ -0.28
SMIM4-205ENST00000491607 H3BMM0 161 aa13.28□□□□□ -0.28
SMIM4-205ENST00000491607 FABP1P07148 127 aa13.28□□□□□ -0.28
SMIM4-205ENST00000491607 RAB11AP62491 216 aa13.28□□□□□ -0.28
SMIM4-205ENST00000491607 TMEM128Q5BJH2 165 aa13.28□□□□□ -0.28
SMIM4-205ENST00000491607 OR8G2PQ6IF36 304 aa13.28□□□□□ -0.28
SMIM4-205ENST00000491607 PPP1R14BQ96C90 147 aa13.28□□□□□ -0.28
SMIM4-205ENST00000491607 LINC00052Q96N35 136 aa13.28□□□□□ -0.28
SMIM4-205ENST00000491607 AGRNO00468 2067 aa13.27□□□□□ -0.28
SMIM4-205ENST00000491607 IGKV1D-37A0A075B6S9 117 aa13.27□□□□□ -0.29
SMIM4-205ENST00000491607 DUXBA0A1W2PPF3 345 aa13.27□□□□□ -0.29
SMIM4-205ENST00000491607 IGKV3-20P01619 116 aa13.27□□□□□ -0.29
SMIM4-205ENST00000491607 HLA-DRB4P13762 266 aa13.27□□□□□ -0.29
SMIM4-205ENST00000491607 NKX2-1P43699 371 aaPredicted RBP13.27□□□□□ -0.29
SMIM4-205ENST00000491607 OR2F1Q13607 317 aa13.27□□□□□ -0.29
SMIM4-205ENST00000491607 ZNF767PQ75MW2 155 aa13.27□□□□□ -0.29
SMIM4-205ENST00000491607 TRIM63Q969Q1 353 aa13.27□□□□□ -0.29
SMIM4-205ENST00000491607 CELA1Q9UNI1 258 aa13.27□□□□□ -0.29
SMIM4-205ENST00000491607 HLA-DRB4X5D2U9 266 aa13.27□□□□□ -0.29
SMIM4-205ENST00000491607 SNRPGP15A8MWD9 76 aa13.26□□□□□ -0.29
SMIM4-205ENST00000491607 PITX3O75364 302 aa13.26□□□□□ -0.29
SMIM4-205ENST00000491607 ID1P41134 155 aa13.26□□□□□ -0.29
SMIM4-205ENST00000491607 DEFB1P60022 68 aa13.26□□□□□ -0.29
SMIM4-205ENST00000491607 GDF5OSQ5U4N7 250 aa13.26□□□□□ -0.29
SMIM4-205ENST00000491607 COQ8AQ8NI60 647 aa13.26□□□□□ -0.29
SMIM4-205ENST00000491607 WDR12Q9GZL7 423 aaKnown RBP13.26□□□□□ -0.29
SMIM4-205ENST00000491607 IGHV4-4A0A075B6R2 117 aa13.25□□□□□ -0.29
SMIM4-205ENST00000491607 CCDC160A6NGH7 325 aa13.25□□□□□ -0.29
SMIM4-205ENST00000491607 FXYD7P58549 80 aa13.25□□□□□ -0.29
SMIM4-205ENST00000491607 V9GYH0 126 aa13.25□□□□□ -0.29
SMIM4-205ENST00000491607 IGHV3OR16-12A0A075B7B8 117 aa13.24□□□□□ -0.29
SMIM4-205ENST00000491607 MED6O75586 246 aa13.24□□□□□ -0.29
SMIM4-205ENST00000491607 S100A5P33763 92 aa13.24□□□□□ -0.29
SMIM4-205ENST00000491607 PSMB3P49720 205 aa13.24□□□□□ -0.29
SMIM4-205ENST00000491607 C12orf74Q32Q52 190 aa13.24□□□□□ -0.29
SMIM4-205ENST00000491607 C1orf194Q5T5A4 169 aa13.24□□□□□ -0.29
SMIM4-205ENST00000491607 GSG1LQ6UXU4 331 aa13.24□□□□□ -0.29
SMIM4-205ENST00000491607 LRTM2Q8N967 370 aa13.24□□□□□ -0.29
SMIM4-205ENST00000491607 OR4B1Q8NGF8 309 aa13.24□□□□□ -0.29
SMIM4-205ENST00000491607 TRGV9Q99603 122 aa13.24□□□□□ -0.29
SMIM4-205ENST00000491607 SLC25A21Q9BQT8 299 aaPredicted RBP13.24□□□□□ -0.29
SMIM4-205ENST00000491607 MAGT1Q9H0U3 335 aa13.24□□□□□ -0.29
SMIM4-205ENST00000491607 SAV1Q9H4B6 383 aaPredicted RBP13.24□□□□□ -0.29
SMIM4-205ENST00000491607 DEFB131BA0A096LNP1 70 aa13.23□□□□□ -0.29
SMIM4-205ENST00000491607 SLC25A6P12236 298 aa13.23□□□□□ -0.29
SMIM4-205ENST00000491607 RPP30P78346 268 aaKnown RBP13.23□□□□□ -0.29
SMIM4-205ENST00000491607 PPP1R1AQ13522 171 aa13.23□□□□□ -0.29
SMIM4-205ENST00000491607 FOXI2Q6ZQN5 318 aa13.23□□□□□ -0.29
SMIM4-205ENST00000491607 OR8I2Q8N0Y5 310 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms