RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 C1RLQ9NZP8 487 aa9.49□□□□□ -0.89
SRGAP3-210ENST00000491467 COX7A2P2O60397 106 aa9.48□□□□□ -0.89
SRGAP3-210ENST00000491467 TOX4O94842 621 aa9.48□□□□□ -0.89
SRGAP3-210ENST00000491467 CNIH1O95406 144 aa9.48□□□□□ -0.89
SRGAP3-210ENST00000491467 PAX1P15863 534 aa9.48□□□□□ -0.89
SRGAP3-210ENST00000491467 BRS3P32247 399 aa9.48□□□□□ -0.89
SRGAP3-210ENST00000491467 MMDQ15546 238 aa9.48□□□□□ -0.89
SRGAP3-210ENST00000491467 ADIRFQ15847 76 aa9.48□□□□□ -0.89
SRGAP3-210ENST00000491467 C5orf64Q2M2E5 130 aa9.48□□□□□ -0.89
SRGAP3-210ENST00000491467 ZNF562Q6V9R5 426 aa9.48□□□□□ -0.89
SRGAP3-210ENST00000491467 MIR17HGQ75NE6 70 aa9.48□□□□□ -0.89
SRGAP3-210ENST00000491467 MISP3Q96FF7 219 aa9.48□□□□□ -0.89
SRGAP3-210ENST00000491467 OR5B12Q96R08 314 aa9.48□□□□□ -0.89
SRGAP3-210ENST00000491467 TNFRSF19Q9NS68 423 aa9.48□□□□□ -0.89
SRGAP3-210ENST00000491467 CMYA5Q8N3K9 4069 aa9.47□□□□□ -0.89
SRGAP3-210ENST00000491467 IGKV1D-37A0A075B6S9 117 aa9.47□□□□□ -0.89
SRGAP3-210ENST00000491467 TRAV30A0A087WSZ9 112 aa9.47□□□□□ -0.89
SRGAP3-210ENST00000491467 C9JCJ5 164 aa9.47□□□□□ -0.89
SRGAP3-210ENST00000491467 NDUFB4O95168 129 aa9.47□□□□□ -0.89
SRGAP3-210ENST00000491467 S100A6P06703 90 aa9.47□□□□□ -0.89
SRGAP3-210ENST00000491467 DEFA4P12838 97 aa9.47□□□□□ -0.89
SRGAP3-210ENST00000491467 ZFP36P26651 326 aaKnown RBP9.47□□□□□ -0.89
SRGAP3-210ENST00000491467 SRP14P37108 136 aaKnown RBP9.47□□□□□ -0.89
SRGAP3-210ENST00000491467 ATP5G3P48201 142 aa9.47□□□□□ -0.89
SRGAP3-210ENST00000491467 UBE2G2P60604 165 aa9.47□□□□□ -0.89
SRGAP3-210ENST00000491467 LDLRAD2Q5SZI1 272 aa9.47□□□□□ -0.89
SRGAP3-210ENST00000491467 S100A7AQ86SG5 101 aa9.47□□□□□ -0.89
SRGAP3-210ENST00000491467 OR4X1Q8NH49 305 aa9.47□□□□□ -0.89
SRGAP3-210ENST00000491467 TMEM37Q8WXS4 190 aa9.47□□□□□ -0.89
SRGAP3-210ENST00000491467 PYGO2Q9BRQ0 406 aa9.47□□□□□ -0.89
SRGAP3-210ENST00000491467 HILPDAQ9Y5L2 63 aa9.47□□□□□ -0.89
SRGAP3-210ENST00000491467 NPIPB5A8MRT5 1133 aa9.46□□□□□ -0.9
SRGAP3-210ENST00000491467 H7BYZ3 331 aa9.46□□□□□ -0.9
SRGAP3-210ENST00000491467 NDUFS7O75251 213 aa9.46□□□□□ -0.9
SRGAP3-210ENST00000491467 EIF3GO75821 320 aaKnown RBP eCLIP9.46□□□□□ -0.9
SRGAP3-210ENST00000491467 PFN1P07737 140 aaKnown RBP9.46□□□□□ -0.9
SRGAP3-210ENST00000491467 FAM106CPP0CH98 169 aa9.46□□□□□ -0.9
SRGAP3-210ENST00000491467 NPPCP23582 126 aa9.46□□□□□ -0.9
SRGAP3-210ENST00000491467 DLX1P56177 255 aa9.46□□□□□ -0.9
SRGAP3-210ENST00000491467 KLRD1Q13241 179 aa9.46□□□□□ -0.9
SRGAP3-210ENST00000491467 FXYD3Q14802 87 aa9.46□□□□□ -0.9
SRGAP3-210ENST00000491467 SPATA31B1PQ5VZV4 182 aa9.46□□□□□ -0.9
SRGAP3-210ENST00000491467 KCNIP4Q6PIL6 250 aa9.46□□□□□ -0.9
SRGAP3-210ENST00000491467 Q8N6K4 173 aa9.46□□□□□ -0.9
SRGAP3-210ENST00000491467 OR51G1Q8NGK1 321 aa9.46□□□□□ -0.9
SRGAP3-210ENST00000491467 Q8WTZ3 238 aa9.46□□□□□ -0.9
SRGAP3-210ENST00000491467 PIMREGQ9BSJ6 248 aa9.46□□□□□ -0.9
SRGAP3-210ENST00000491467 WNT10AQ9GZT5 417 aa9.46□□□□□ -0.9
SRGAP3-210ENST00000491467 I3L2K1 104 aa9.45□□□□□ -0.9
SRGAP3-210ENST00000491467 FCN1O00602 326 aa9.45□□□□□ -0.9
SRGAP3-210ENST00000491467 OR7C2O60412 319 aa9.45□□□□□ -0.9
SRGAP3-210ENST00000491467 REG1AP05451 166 aa9.45□□□□□ -0.9
SRGAP3-210ENST00000491467 HNF1AP20823 631 aa9.45□□□□□ -0.9
SRGAP3-210ENST00000491467 RPS10P46783 165 aaKnown RBP9.45□□□□□ -0.9
SRGAP3-210ENST00000491467 MFAP2P55001 183 aa9.45□□□□□ -0.9
SRGAP3-210ENST00000491467 DSCR9P59020 149 aa9.45□□□□□ -0.9
SRGAP3-210ENST00000491467 LCN2P80188 198 aa9.45□□□□□ -0.9
SRGAP3-210ENST00000491467 SSBP2P81877 361 aaPredicted RBP9.45□□□□□ -0.9
SRGAP3-210ENST00000491467 HES1Q14469 280 aa9.45□□□□□ -0.9
SRGAP3-210ENST00000491467 C16orf82Q7Z2V1 217 aa9.45□□□□□ -0.9
SRGAP3-210ENST00000491467 LHFPL4Q7Z7J7 247 aa9.45□□□□□ -0.9
SRGAP3-210ENST00000491467 LINC01551Q86U37 167 aa9.45□□□□□ -0.9
SRGAP3-210ENST00000491467 FAM210BQ96KR6 192 aa9.45□□□□□ -0.9
SRGAP3-210ENST00000491467 FAM167A-AS1Q96KT0 104 aa9.45□□□□□ -0.9
SRGAP3-210ENST00000491467 ZNF48Q96MX3 618 aaPredicted RBP9.45□□□□□ -0.9
SRGAP3-210ENST00000491467 BPESC1Q9GZL8 116 aa9.45□□□□□ -0.9
SRGAP3-210ENST00000491467 OR51M1Q9H341 326 aa9.45□□□□□ -0.9
SRGAP3-210ENST00000491467 RNF24Q9Y225 148 aa9.45□□□□□ -0.9
SRGAP3-210ENST00000491467 YTHDF2Q9Y5A9 579 aaKnown RBP9.45□□□□□ -0.9
SRGAP3-210ENST00000491467 TRAV9-1A0A075B6T8 112 aa9.44□□□□□ -0.9
SRGAP3-210ENST00000491467 HELTA6NFD8 242 aa9.44□□□□□ -0.9
SRGAP3-210ENST00000491467 HYPMO75409 117 aa9.44□□□□□ -0.9
SRGAP3-210ENST00000491467 SCGB2A1O75556 95 aa9.44□□□□□ -0.9
SRGAP3-210ENST00000491467 IGHV4-39P01824 125 aa9.44□□□□□ -0.9
SRGAP3-210ENST00000491467 GATA2P23769 480 aaPredicted RBP9.44□□□□□ -0.9
SRGAP3-210ENST00000491467 GALR1P47211 349 aa9.44□□□□□ -0.9
SRGAP3-210ENST00000491467 FOXL1Q12952 345 aa9.44□□□□□ -0.9
SRGAP3-210ENST00000491467 FAM120AOSQ5T036 256 aa9.44□□□□□ -0.9
SRGAP3-210ENST00000491467 TTC9CQ8N5M4 171 aa9.44□□□□□ -0.9
SRGAP3-210ENST00000491467 FAM168AQ92567 244 aa9.44□□□□□ -0.9
SRGAP3-210ENST00000491467 ZNF503Q96F45 646 aa9.44□□□□□ -0.9
SRGAP3-210ENST00000491467 TMEM68Q96MH6 324 aa9.44□□□□□ -0.9
SRGAP3-210ENST00000491467 PAXXQ9BUH6 204 aa9.44□□□□□ -0.9
SRGAP3-210ENST00000491467 SLC25A2Q9BXI2 301 aa9.44□□□□□ -0.9
SRGAP3-210ENST00000491467 THYN1Q9P016 225 aa9.44□□□□□ -0.9
SRGAP3-210ENST00000491467 MDFIC2A0A1B0GVS7 189 aa9.43□□□□□ -0.9
SRGAP3-210ENST00000491467 C5orf52A6NGY3 159 aa9.43□□□□□ -0.9
SRGAP3-210ENST00000491467 VWC2LB2RUY7 222 aa9.43□□□□□ -0.9
SRGAP3-210ENST00000491467 S100A9P06702 114 aaKnown RBP9.43□□□□□ -0.9
SRGAP3-210ENST00000491467 HIST1H1BP16401 226 aaKnown RBP9.43□□□□□ -0.9
SRGAP3-210ENST00000491467 TMEM11P17152 192 aa9.43□□□□□ -0.9
SRGAP3-210ENST00000491467 S100A7P31151 101 aa9.43□□□□□ -0.9
SRGAP3-210ENST00000491467 TAS2R60P59551 318 aa9.43□□□□□ -0.9
SRGAP3-210ENST00000491467 ZNF90Q03938 601 aa9.43□□□□□ -0.9
SRGAP3-210ENST00000491467 PAX8Q06710 450 aa9.43□□□□□ -0.9
SRGAP3-210ENST00000491467 KLK9Q2XQG4 91 aa9.43□□□□□ -0.9
SRGAP3-210ENST00000491467 CYB5R2Q6BCY4 276 aa9.43□□□□□ -0.9
SRGAP3-210ENST00000491467 PATE2Q6UY27 113 aa9.43□□□□□ -0.9
SRGAP3-210ENST00000491467 OR5AU1Q8NGC0 362 aa9.43□□□□□ -0.9
SRGAP3-210ENST00000491467 C10orf105Q8TEF2 133 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms