RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 PRR20DP86480 221 aa9.88□□□□□ -0.83
COL6A3-211ENST00000491233 PRR20BP86481 221 aa9.88□□□□□ -0.83
COL6A3-211ENST00000491233 PRR20AP86496 221 aa9.88□□□□□ -0.83
COL6A3-211ENST00000491233 SMCO1Q147U7 214 aa9.88□□□□□ -0.83
COL6A3-211ENST00000491233 SIGLEC15Q6ZMC9 328 aa9.88□□□□□ -0.83
COL6A3-211ENST00000491233 LYZL2Q7Z4W2 148 aa9.88□□□□□ -0.83
COL6A3-211ENST00000491233 LGI3Q8N145 548 aa9.88□□□□□ -0.83
COL6A3-211ENST00000491233 OR51G1Q8NGK1 321 aa9.88□□□□□ -0.83
COL6A3-211ENST00000491233 BCL7BQ9BQE9 202 aa9.88□□□□□ -0.83
COL6A3-211ENST00000491233 RBKSQ9H477 322 aa9.88□□□□□ -0.83
COL6A3-211ENST00000491233 NRN1Q9NPD7 142 aa9.88□□□□□ -0.83
COL6A3-211ENST00000491233 TBC1D24Q9ULP9 559 aa9.88□□□□□ -0.83
COL6A3-211ENST00000491233 VPS13DQ5THJ4 4388 aa9.88□□□□□ -0.83
COL6A3-211ENST00000491233 FRAS1Q86XX4 4008 aa9.87□□□□□ -0.83
COL6A3-211ENST00000491233 DNAH6Q9C0G6 4158 aa9.87□□□□□ -0.83
COL6A3-211ENST00000491233 ELOA3CA0A087WX78 387 aaPredicted RBP9.87□□□□□ -0.83
COL6A3-211ENST00000491233 NOL3O60936 208 aaKnown RBP9.87□□□□□ -0.83
COL6A3-211ENST00000491233 SNRPD3P62318 126 aaKnown RBP9.87□□□□□ -0.83
COL6A3-211ENST00000491233 SRPXP78539 464 aa9.87□□□□□ -0.83
COL6A3-211ENST00000491233 Q6ZTC4 211 aa9.87□□□□□ -0.83
COL6A3-211ENST00000491233 CSNK1G2-AS1Q8NCQ2 148 aa9.87□□□□□ -0.83
COL6A3-211ENST00000491233 RNF125Q96EQ8 232 aa9.87□□□□□ -0.83
COL6A3-211ENST00000491233 PBDC1Q9BVG4 233 aa9.87□□□□□ -0.83
COL6A3-211ENST00000491233 SLIRPQ9GZT3 109 aaKnown RBP9.87□□□□□ -0.83
COL6A3-211ENST00000491233 APLNQ9ULZ1 77 aa9.87□□□□□ -0.83
COL6A3-211ENST00000491233 U3KQ87 197 aa9.87□□□□□ -0.83
COL6A3-211ENST00000491233 H3BMQ9 156 aa9.86□□□□□ -0.83
COL6A3-211ENST00000491233 ANXA3P12429 323 aa9.86□□□□□ -0.83
COL6A3-211ENST00000491233 TNFSF8P32971 234 aa9.86□□□□□ -0.83
COL6A3-211ENST00000491233 OR1S1Q8NH92 325 aa9.86□□□□□ -0.83
COL6A3-211ENST00000491233 SLC35E1Q96K37 410 aa9.86□□□□□ -0.83
COL6A3-211ENST00000491233 SEPSECSQ9HD40 501 aaKnown RBP9.86□□□□□ -0.83
COL6A3-211ENST00000491233 CELA1Q9UNI1 258 aa9.86□□□□□ -0.83
COL6A3-211ENST00000491233 TRAV10A0A0B4J240 114 aa9.85□□□□□ -0.83
COL6A3-211ENST00000491233 FABP12A6NFH5 140 aa9.85□□□□□ -0.83
COL6A3-211ENST00000491233 ZFP92A6NM28 416 aa9.85□□□□□ -0.83
COL6A3-211ENST00000491233 H3BMM0 161 aa9.85□□□□□ -0.83
COL6A3-211ENST00000491233 NUP62P37198 522 aaPredicted RBP9.85□□□□□ -0.83
COL6A3-211ENST00000491233 KLF9Q13886 244 aaPredicted RBP9.85□□□□□ -0.83
COL6A3-211ENST00000491233 OR8G2PQ6IF36 304 aa9.85□□□□□ -0.83
COL6A3-211ENST00000491233 TMED4Q7Z7H5 227 aa9.85□□□□□ -0.83
COL6A3-211ENST00000491233 MCFD2Q8NI22 146 aa9.85□□□□□ -0.83
COL6A3-211ENST00000491233 SOSTQ9BQB4 213 aa9.85□□□□□ -0.83
COL6A3-211ENST00000491233 C1QTNF4Q9BXJ3 329 aa9.85□□□□□ -0.83
COL6A3-211ENST00000491233 XCL2Q9UBD3 114 aa9.85□□□□□ -0.83
COL6A3-211ENST00000491233 IGKV1D-37A0A075B6S9 117 aa9.84□□□□□ -0.83
COL6A3-211ENST00000491233 IAPPP10997 89 aa9.84□□□□□ -0.83
COL6A3-211ENST00000491233 HLA-DRB4P13762 266 aa9.84□□□□□ -0.83
COL6A3-211ENST00000491233 FAUP35544 74 aaKnown RBP9.84□□□□□ -0.83
COL6A3-211ENST00000491233 DEFB1P60022 68 aa9.84□□□□□ -0.83
COL6A3-211ENST00000491233 LYZP61626 148 aa9.84□□□□□ -0.83
COL6A3-211ENST00000491233 NUTF2P61970 127 aaKnown RBP9.84□□□□□ -0.83
COL6A3-211ENST00000491233 ZNF90Q03938 601 aa9.84□□□□□ -0.83
COL6A3-211ENST00000491233 GAMTQ14353 236 aa9.84□□□□□ -0.83
COL6A3-211ENST00000491233 ZNF767PQ75MW2 155 aa9.84□□□□□ -0.83
COL6A3-211ENST00000491233 CENPSQ8N2Z9 138 aa9.84□□□□□ -0.83
COL6A3-211ENST00000491233 TRIM63Q969Q1 353 aa9.84□□□□□ -0.83
COL6A3-211ENST00000491233 HLA-DRB4X5D2U9 266 aa9.84□□□□□ -0.83
COL6A3-211ENST00000491233 IGHV4-4A0A075B6R2 117 aa9.83□□□□□ -0.84
COL6A3-211ENST00000491233 DUXBA0A1W2PPF3 345 aa9.83□□□□□ -0.84
COL6A3-211ENST00000491233 GPX4P36969 197 aaPredicted RBP9.83□□□□□ -0.84
COL6A3-211ENST00000491233 NKX2-1P43699 371 aaPredicted RBP9.83□□□□□ -0.84
COL6A3-211ENST00000491233 ATP5IP56385 69 aaPredicted RBP9.83□□□□□ -0.84
COL6A3-211ENST00000491233 OR2F1Q13607 317 aa9.83□□□□□ -0.84
COL6A3-211ENST00000491233 GDF5OSQ5U4N7 250 aa9.83□□□□□ -0.84
COL6A3-211ENST00000491233 WDR12Q9GZL7 423 aaKnown RBP9.83□□□□□ -0.84
COL6A3-211ENST00000491233 PFDN2Q9UHV9 154 aa9.83□□□□□ -0.84
COL6A3-211ENST00000491233 PIGBOS1A0A0B4J2F0 54 aa9.82□□□□□ -0.84
COL6A3-211ENST00000491233 PITX3O75364 302 aa9.82□□□□□ -0.84
COL6A3-211ENST00000491233 IGKV3-20P01619 116 aa9.82□□□□□ -0.84
COL6A3-211ENST00000491233 FABP1P07148 127 aa9.82□□□□□ -0.84
COL6A3-211ENST00000491233 VAMP1P23763 118 aa9.82□□□□□ -0.84
COL6A3-211ENST00000491233 C12orf74Q32Q52 190 aa9.82□□□□□ -0.84
COL6A3-211ENST00000491233 LINC00052Q96N35 136 aa9.82□□□□□ -0.84
COL6A3-211ENST00000491233 PAIP2BQ9ULR5 123 aaKnown RBP9.82□□□□□ -0.84
COL6A3-211ENST00000491233 SOCS3O14543 225 aa9.81□□□□□ -0.84
COL6A3-211ENST00000491233 AMBPP02760 352 aa9.81□□□□□ -0.84
COL6A3-211ENST00000491233 PSMB3P49720 205 aa9.81□□□□□ -0.84
COL6A3-211ENST00000491233 FXYD7P58549 80 aa9.81□□□□□ -0.84
COL6A3-211ENST00000491233 AP3S2P59780 193 aa9.81□□□□□ -0.84
COL6A3-211ENST00000491233 RAB11AP62491 216 aa9.81□□□□□ -0.84
COL6A3-211ENST00000491233 PYDC2Q56P42 97 aa9.81□□□□□ -0.84
COL6A3-211ENST00000491233 TMEM128Q5BJH2 165 aa9.81□□□□□ -0.84
COL6A3-211ENST00000491233 GSG1LQ6UXU4 331 aa9.81□□□□□ -0.84
COL6A3-211ENST00000491233 TOMM5Q8N4H5 51 aa9.81□□□□□ -0.84
COL6A3-211ENST00000491233 COQ8AQ8NI60 647 aa9.81□□□□□ -0.84
COL6A3-211ENST00000491233 PPP1R14BQ96C90 147 aa9.81□□□□□ -0.84
COL6A3-211ENST00000491233 TRGV9Q99603 122 aa9.81□□□□□ -0.84
COL6A3-211ENST00000491233 RNF126Q9BV68 326 aa9.81□□□□□ -0.84
COL6A3-211ENST00000491233 V9GYH0 126 aa9.81□□□□□ -0.84
COL6A3-211ENST00000491233 DEFB131BA0A096LNP1 70 aa9.8□□□□□ -0.84
COL6A3-211ENST00000491233 ID1P41134 155 aa9.8□□□□□ -0.84
COL6A3-211ENST00000491233 ZNF79Q15937 498 aa9.8□□□□□ -0.84
COL6A3-211ENST00000491233 C1orf194Q5T5A4 169 aa9.8□□□□□ -0.84
COL6A3-211ENST00000491233 ZNF705AQ6ZN79 300 aaPredicted RBP9.8□□□□□ -0.84
COL6A3-211ENST00000491233 FOXI2Q6ZQN5 318 aa9.8□□□□□ -0.84
COL6A3-211ENST00000491233 LRTM2Q8N967 370 aa9.8□□□□□ -0.84
COL6A3-211ENST00000491233 SAV1Q9H4B6 383 aaPredicted RBP9.8□□□□□ -0.84
COL6A3-211ENST00000491233 IGHV3OR16-12A0A075B7B8 117 aa9.79□□□□□ -0.84
COL6A3-211ENST00000491233 IGKV1OR2-108A0A075B7D4 117 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms