RNA–Protein interactions for RNA: ENST00000490924.1

VPS41-214, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-214ENST00000490924 SPATA12Q7Z6I5 190 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 ZNF329Q86UD4 541 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 MOGAT3Q86VF5 341 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 NIT1Q86X76 327 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 VKORC1L1Q8N0U8 176 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 LYG1Q8N1E2 194 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 LYPD1Q8N2G4 141 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 TPRX1Q8N7U7 411 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 TEX45Q8NA69 505 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 C5orf17Q8NAS9 161 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 ZNRF1Q8ND25 227 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 OR5T1Q8NG75 326 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 OR8B3Q8NGG8 313 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 C18orf32Q8TCD1 76 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 DPF1Q92782 380 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 ST6GALNAC6Q969X2 333 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 FLYWCH2Q96CP2 140 aaKnown RBP4.69□□□□□ -1.66
VPS41-214ENST00000490924 PERPQ96FX8 193 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 OR8B2Q96RD0 313 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 ATG101Q9BSB4 218 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 NDFIP1Q9BT67 221 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 PAXXQ9BUH6 204 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 SLC25A2Q9BXI2 301 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 NPFFR1Q9GZQ6 430 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 LPAR2Q9HBW0 351 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 LAMTOR2Q9Y2Q5 125 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 ZZEF1O43149 2961 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 ESPL1Q14674 2120 aa4.69□□□□□ -1.66
VPS41-214ENST00000490924 CACNA1DQ01668 2161 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 RIF1Q5UIP0 2472 aaKnown RBP4.68□□□□□ -1.66
VPS41-214ENST00000490924 IGHV1-69-2A0A0G2JMI3 117 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 SERTM2A0A1B0GWG4 89 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 VSTM5A8MXK1 200 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 TNFRSF13BO14836 293 aaPredicted RBP4.68□□□□□ -1.66
VPS41-214ENST00000490924 HYPMO75409 117 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 FOXH1O75593 365 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 AGFG2O95081 481 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 LTAP01374 205 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 IGHV1-46P01743 117 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 C3orf79P0CE67 100 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 ZNF25P17030 456 aaPredicted RBP4.68□□□□□ -1.66
VPS41-214ENST00000490924 HBBP68871 147 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 CLEC12BQ2HXU8 276 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 KRTAP15-1Q3LI76 137 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 SPATA45Q537H7 98 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 FAM53AQ6NSI3 398 aaPredicted RBP4.68□□□□□ -1.66
VPS41-214ENST00000490924 C16orf54Q6UWD8 224 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 TMEM108Q6UXF1 575 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 VASH2Q86V25 355 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 ZADH2Q8N4Q0 377 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 FDCSPQ8NFU4 85 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 VN1R17PQ8TDU5 208 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 ITLN1Q8WWA0 313 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 FXYD5Q96DB9 178 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 HARBI1Q96MB7 349 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 ALKBH7Q9BT30 221 aaPredicted RBP4.68□□□□□ -1.66
VPS41-214ENST00000490924 DCTN5Q9BTE1 182 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 MS4A6AQ9H2W1 248 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 ASCL3Q9NQ33 180 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 EPDR1Q9UM22 224 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 WASHC3Q9Y3C0 194 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 KNTC1P50748 2209 aa4.68□□□□□ -1.66
VPS41-214ENST00000490924 TPRP12270 2363 aaKnown RBP4.67□□□□□ -1.66
VPS41-214ENST00000490924 FRYQ5TBA9 3013 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 C19orf71A6NCJ1 209 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 K7EP13 123 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 HSBP1O75506 76 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 IGKV1-16P04430 117 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 TSPOP30536 169 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 CDKN1AP38936 164 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 HNRNPA3P51991 378 aaKnown RBP4.67□□□□□ -1.66
VPS41-214ENST00000490924 MFAP2P55001 183 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 LINC00205P59089 165 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 KRTDAPP60985 99 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 UBE2G1P62253 170 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 PDE6HQ13956 83 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 SAPCD1Q5SSQ6 148 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 C1orf185Q5T7R7 199 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 ZNF474Q6S9Z5 364 aaPredicted RBP4.67□□□□□ -1.66
VPS41-214ENST00000490924 DHRS13Q6UX07 377 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 RBPMS2Q6ZRY4 209 aaKnown RBP4.67□□□□□ -1.66
VPS41-214ENST00000490924 Q6ZS92 163 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 SEM1Q6ZVN7 128 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 COX8CQ7Z4L0 72 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 DOLPP1Q86YN1 238 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 MUC15Q8N387 334 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 NUP35Q8NFH5 326 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 OR9G1Q8NH87 305 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 C8orf46Q8TAG6 207 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 SNRNP40Q96DI7 357 aaKnown RBP4.67□□□□□ -1.66
VPS41-214ENST00000490924 ZNF48Q96MX3 618 aaPredicted RBP4.67□□□□□ -1.66
VPS41-214ENST00000490924 PMCHL2Q9BQD1 86 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 TMEM70Q9BUB7 260 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 RNASE7Q9H1E1 156 aaKnown RBP4.67□□□□□ -1.66
VPS41-214ENST00000490924 RPP21Q9H633 154 aaKnown RBP4.67□□□□□ -1.66
VPS41-214ENST00000490924 OTORQ9NRC9 128 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 ZNF355PQ9NSJ1 428 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 PAM16Q9Y3D7 125 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 R4GN57 208 aa4.67□□□□□ -1.66
VPS41-214ENST00000490924 DOCK11Q5JSL3 2073 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms