RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	SIGLECL1	Q8N7X8	197 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833	OR10W1	Q8NGF6	305 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833	OR2T6	Q8NHC8	308 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833	VN1R17P	Q8TDU5	208 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833	TSKU	Q8WUA8	353 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833	BORCS7	Q96B45	105 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833	FAM167A-AS1	Q96KT0	104 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833	MS4A10	Q96PG2	267 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833	SLC25A2	Q9BXI2	301 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833	SERTAD4	Q9NUC0	356 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833	ONECUT1	Q9UBC0	465 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833		V9GYV3	84 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833	CFAP54	Q96N23	3096 aa		5.08	□□□□□ -1.6
FN1-223	ENST00000490833	DSCAM	O60469	2012 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	C20orf202	A1L168	122 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	PGP	A6NDG6	321 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	FAM90A27P	A6NNH2	459 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	NDUFS8	O00217	210 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	APCS	P02743	223 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	SLC25A5	P05141	298 aa	Known RBP	5.07	□□□□□ -1.6
FN1-223	ENST00000490833	OR5AL1	P0C617	328 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	MGST1	P10620	155 aa	Known RBP	5.07	□□□□□ -1.6
FN1-223	ENST00000490833	RPL7	P18124	248 aa	Known RBP	5.07	□□□□□ -1.6
FN1-223	ENST00000490833	ORM2	P19652	201 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	COL8A2	P25067	703 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	REG1B	P48304	166 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	UBE2E1	P51965	193 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	RPS20	P60866	119 aa	Known RBP	5.07	□□□□□ -1.6
FN1-223	ENST00000490833	FXYD3	Q14802	87 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	MMD	Q15546	238 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	KLK9	Q2XQG4	91 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	PYY3	Q5JQD4	70 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	PSMG4	Q5JS54	123 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	DUX4L9	Q6RFH8	374 aa	Predicted RBP	5.07	□□□□□ -1.6
FN1-223	ENST00000490833	ZNF329	Q86UD4	541 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	KLHDC1	Q8N7A1	406 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	OR1B1	Q8NGR6	318 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	LINC01560	Q8TB33	94 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	FXYD5	Q96DB9	178 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	SAMD10	Q9BYL1	202 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	WNT10A	Q9GZT5	417 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	ZNF586	Q9NXT0	402 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	KLK9	Q9UKQ9	250 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	5.07	□□□□□ -1.6
FN1-223	ENST00000490833	DOCK11	Q5JSL3	2073 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	SVIL	O95425	2214 aa		5.07	□□□□□ -1.6
FN1-223	ENST00000490833	WDFY3	Q8IZQ1	3526 aa		5.06	□□□□□ -1.6
FN1-223	ENST00000490833	TRBV20OR9-2	A0A075B6H5	130 aa		5.06	□□□□□ -1.6
FN1-223	ENST00000490833	IGKV1D-37	A0A075B6S9	117 aa		5.06	□□□□□ -1.6
FN1-223	ENST00000490833	ODF3B	A8MYP8	253 aa		5.06	□□□□□ -1.6
FN1-223	ENST00000490833	SNURFL	B1AK76	121 aa		5.06	□□□□□ -1.6
FN1-223	ENST00000490833	GGTLC3	B5MD39	225 aa		5.06	□□□□□ -1.6
FN1-223	ENST00000490833		I3L2K1	104 aa		5.06	□□□□□ -1.6
FN1-223	ENST00000490833	GNG7	O60262	68 aa		5.06	□□□□□ -1.6
FN1-223	ENST00000490833		P01737	135 aa		5.06	□□□□□ -1.6
FN1-223	ENST00000490833	AMBP	P02760	352 aa		5.06	□□□□□ -1.6
FN1-223	ENST00000490833	IGLC1	P0CG04	106 aa		5.06	□□□□□ -1.6
FN1-223	ENST00000490833	CT45A10	P0DMU9	189 aa		5.06	□□□□□ -1.6
FN1-223	ENST00000490833	GZMB	P10144	247 aa		5.06	□□□□□ -1.6
FN1-223	ENST00000490833	MYCNOS	P40205	109 aa		5.06	□□□□□ -1.6
FN1-223	ENST00000490833	FOXA3	P55318	350 aa	Predicted RBP	5.06	□□□□□ -1.6
FN1-223	ENST00000490833	DSCR9	P59020	149 aa		5.06	□□□□□ -1.6
FN1-223	ENST00000490833	HOXA4	Q00056	320 aa	Predicted RBP	5.06	□□□□□ -1.6
FN1-223	ENST00000490833	PMCHL1	Q16048	86 aa		5.06	□□□□□ -1.6
FN1-223	ENST00000490833	C5orf64	Q2M2E5	130 aa		5.06	□□□□□ -1.6
FN1-223	ENST00000490833	C11orf71	Q6IPW1	123 aa		5.06	□□□□□ -1.6
FN1-223	ENST00000490833	TMEM75	Q8N9X5	138 aa		5.06	□□□□□ -1.6
FN1-223	ENST00000490833	IGF2BP2-AS1	Q96M15	143 aa		5.06	□□□□□ -1.6
FN1-223	ENST00000490833	SHANK2-AS3	Q9BTD1	123 aa		5.06	□□□□□ -1.6
FN1-223	ENST00000490833	DERL1	Q9BUN8	251 aa		5.06	□□□□□ -1.6
FN1-223	ENST00000490833	ELOVL1	Q9BW60	279 aa		5.06	□□□□□ -1.6
FN1-223	ENST00000490833	FNDC4	Q9H6D8	234 aa	Predicted RBP	5.06	□□□□□ -1.6
FN1-223	ENST00000490833	CAD	P27708	2225 aa		5.06	□□□□□ -1.6
FN1-223	ENST00000490833	CGB1	A6NKQ9	187 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	TEX22	C9J3V5	150 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833		K7EN84	100 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	BMPR1B	O00238	502 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	TIMM23	O14925	209 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	OR2J3	O76001	311 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	SCGB1D1	O95968	90 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	LTA	P01374	205 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	TCRA	P04437	139 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	PSG1	P11464	419 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	DDT	P30046	118 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	BMI1	P35226	326 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	IER3	P46695	156 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	ARF6	P62330	175 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	HBB	P68871	147 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	RIG	Q13278	110 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	KLF5	Q13887	457 aa	Predicted RBP	5.05	□□□□□ -1.6
FN1-223	ENST00000490833	HES1	Q14469	280 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	C1orf194	Q5T5A4	169 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	SAMD13	Q5VXD3	122 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	SPATA31B1P	Q5VZV4	182 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	HCP5	Q6MZN7	132 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	RBPMS2	Q6ZRY4	209 aa	Known RBP	5.05	□□□□□ -1.6
FN1-223	ENST00000490833	OR8I2	Q8N0Y5	310 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	CIART	Q8N365	385 aa	Predicted RBP	5.05	□□□□□ -1.6
FN1-223	ENST00000490833	ARPC1A	Q92747	370 aa		5.05	□□□□□ -1.6
FN1-223	ENST00000490833	ZNF503	Q96F45	646 aa		5.05	□□□□□ -1.6

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