RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 WRBO00258 174 aa11.21□□□□□ -0.61
COL27A1-206ENST00000490831 BUB3O43684 328 aa11.21□□□□□ -0.61
COL27A1-206ENST00000490831 IFNA21P01568 189 aa11.21□□□□□ -0.61
COL27A1-206ENST00000490831 RPL11P62913 178 aaKnown RBP11.21□□□□□ -0.61
COL27A1-206ENST00000490831 ZNF124Q15973 351 aa11.21□□□□□ -0.61
COL27A1-206ENST00000490831 C4orf46Q504U0 113 aa11.21□□□□□ -0.61
COL27A1-206ENST00000490831 OR8G2PQ6IF36 304 aa11.21□□□□□ -0.61
COL27A1-206ENST00000490831 FAM24BQ8N5W8 94 aa11.21□□□□□ -0.61
COL27A1-206ENST00000490831 STPG3Q8N7X2 389 aa11.21□□□□□ -0.61
COL27A1-206ENST00000490831 THAP8Q8NA92 274 aa11.21□□□□□ -0.61
COL27A1-206ENST00000490831 RNF183Q96D59 192 aa11.21□□□□□ -0.61
COL27A1-206ENST00000490831 TRGV9Q99603 122 aa11.21□□□□□ -0.61
COL27A1-206ENST00000490831 C20orf85Q9H1P6 137 aa11.21□□□□□ -0.61
COL27A1-206ENST00000490831 IGKV1OR2-108A0A075B7D4 117 aa11.2□□□□□ -0.62
COL27A1-206ENST00000490831 ZFP92A6NM28 416 aa11.2□□□□□ -0.62
COL27A1-206ENST00000490831 SPRY2O43597 315 aa11.2□□□□□ -0.62
COL27A1-206ENST00000490831 TCRBP04435 133 aa11.2□□□□□ -0.62
COL27A1-206ENST00000490831 RPL35AP18077 110 aaKnown RBP11.2□□□□□ -0.62
COL27A1-206ENST00000490831 EIF2B2P49770 351 aaKnown RBP11.2□□□□□ -0.62
COL27A1-206ENST00000490831 AP2S1P53680 142 aaPredicted RBP11.2□□□□□ -0.62
COL27A1-206ENST00000490831 DEFB131AP59861 70 aa11.2□□□□□ -0.62
COL27A1-206ENST00000490831 ZNF90Q03938 601 aa11.2□□□□□ -0.62
COL27A1-206ENST00000490831 IL17DQ8TAD2 202 aa11.2□□□□□ -0.62
COL27A1-206ENST00000490831 RNF125Q96EQ8 232 aa11.2□□□□□ -0.62
COL27A1-206ENST00000490831 RABAC1Q9UI14 185 aa11.2□□□□□ -0.62
COL27A1-206ENST00000490831 SACSQ9NZJ4 4579 aa11.19□□□□□ -0.62
COL27A1-206ENST00000490831 FABP1P07148 127 aa11.19□□□□□ -0.62
COL27A1-206ENST00000490831 NUP62P37198 522 aaPredicted RBP11.19□□□□□ -0.62
COL27A1-206ENST00000490831 NKX2-1P43699 371 aaPredicted RBP11.19□□□□□ -0.62
COL27A1-206ENST00000490831 DEFB135Q30KP9 77 aa11.19□□□□□ -0.62
COL27A1-206ENST00000490831 STXBP6Q8NFX7 210 aa11.19□□□□□ -0.62
COL27A1-206ENST00000490831 S100ZQ8WXG8 99 aa11.19□□□□□ -0.62
COL27A1-206ENST00000490831 CSTL1Q9H114 145 aa11.19□□□□□ -0.62
COL27A1-206ENST00000490831 STRAPQ9Y3F4 350 aaKnown RBP11.19□□□□□ -0.62
COL27A1-206ENST00000490831 POLR2GP62487 172 aaKnown RBP eCLIP11.18□□□□□ -0.62
COL27A1-206ENST00000490831 SPANXN5Q5MJ07 72 aa11.18□□□□□ -0.62
COL27A1-206ENST00000490831 ZFAND6Q6FIF0 208 aa11.18□□□□□ -0.62
COL27A1-206ENST00000490831 SMIM8Q96KF7 97 aa11.18□□□□□ -0.62
COL27A1-206ENST00000490831 SEPSECSQ9HD40 501 aaKnown RBP11.18□□□□□ -0.62
COL27A1-206ENST00000490831 PMS2P5A8MQ11 134 aa11.17□□□□□ -0.62
COL27A1-206ENST00000490831 SNRPGP15A8MWD9 76 aa11.17□□□□□ -0.62
COL27A1-206ENST00000490831 PAX9P55771 341 aa11.17□□□□□ -0.62
COL27A1-206ENST00000490831 IAH1Q2TAA2 248 aaPredicted RBP11.17□□□□□ -0.62
COL27A1-206ENST00000490831 LEMD1Q68G75 181 aa11.17□□□□□ -0.62
COL27A1-206ENST00000490831 ZBTB8BQ8NAP8 495 aaPredicted RBP11.17□□□□□ -0.62
COL27A1-206ENST00000490831 GATAD1Q8WUU5 269 aa11.17□□□□□ -0.62
COL27A1-206ENST00000490831 NUDT15Q9NV35 164 aa11.17□□□□□ -0.62
COL27A1-206ENST00000490831 PFDN2Q9UHV9 154 aa11.17□□□□□ -0.62
COL27A1-206ENST00000490831 PAIP2BQ9ULR5 123 aaKnown RBP11.17□□□□□ -0.62
COL27A1-206ENST00000490831 RYR2Q92736 4967 aa11.17□□□□□ -0.62
COL27A1-206ENST00000490831 H3BP45 60 aa11.16□□□□□ -0.62
COL27A1-206ENST00000490831 CFDP00746 253 aaPredicted RBP11.16□□□□□ -0.62
COL27A1-206ENST00000490831 ATF4P18848 351 aaPredicted RBP11.16□□□□□ -0.62
COL27A1-206ENST00000490831 TAS2R30P59541 319 aa11.16□□□□□ -0.62
COL27A1-206ENST00000490831 C1orf194Q5T5A4 169 aa11.16□□□□□ -0.62
COL27A1-206ENST00000490831 SIGLEC15Q6ZMC9 328 aa11.16□□□□□ -0.62
COL27A1-206ENST00000490831 PBDC1Q9BVG4 233 aa11.16□□□□□ -0.62
COL27A1-206ENST00000490831 NRN1Q9NPD7 142 aa11.16□□□□□ -0.62
COL27A1-206ENST00000490831 PSENENQ9NZ42 101 aa11.16□□□□□ -0.62
COL27A1-206ENST00000490831 TBC1D24Q9ULP9 559 aa11.16□□□□□ -0.62
COL27A1-206ENST00000490831 SSSCA1O60232 199 aa11.15□□□□□ -0.62
COL27A1-206ENST00000490831 ZNF688P0C7X2 276 aa11.15□□□□□ -0.62
COL27A1-206ENST00000490831 ASAH1Q13510 395 aa11.15□□□□□ -0.62
COL27A1-206ENST00000490831 TMEM14EPQ6UXP3 125 aa11.15□□□□□ -0.62
COL27A1-206ENST00000490831 ACOT7LQ6ZUV0 252 aa11.15□□□□□ -0.62
COL27A1-206ENST00000490831 TMEM144Q7Z5S9 345 aa11.15□□□□□ -0.62
COL27A1-206ENST00000490831 TRPT1Q86TN4 253 aaKnown RBP11.15□□□□□ -0.62
COL27A1-206ENST00000490831 ZNF431Q8TF32 576 aaPredicted RBP11.15□□□□□ -0.62
COL27A1-206ENST00000490831 RAB40CQ96S21 281 aa11.15□□□□□ -0.62
COL27A1-206ENST00000490831 PTTG2Q9NZH5 202 aa11.15□□□□□ -0.62
COL27A1-206ENST00000490831 SLC45A2Q9UMX9 530 aa11.15□□□□□ -0.62
COL27A1-206ENST00000490831 RCL1Q9Y2P8 373 aaKnown RBP11.15□□□□□ -0.62
COL27A1-206ENST00000490831 TENM2Q9NT68 2774 aa11.15□□□□□ -0.63
COL27A1-206ENST00000490831 TRAV6A0A075B6T7 132 aa11.14□□□□□ -0.63
COL27A1-206ENST00000490831 FNDC10F2Z333 226 aa11.14□□□□□ -0.63
COL27A1-206ENST00000490831 TSC22D2O75157 780 aa11.14□□□□□ -0.63
COL27A1-206ENST00000490831 LYZP61626 148 aa11.14□□□□□ -0.63
COL27A1-206ENST00000490831 OR2F1Q13607 317 aa11.14□□□□□ -0.63
COL27A1-206ENST00000490831 STHQ8IWL8 128 aa11.14□□□□□ -0.63
COL27A1-206ENST00000490831 FBXL17Q9UF56 701 aa11.14□□□□□ -0.63
COL27A1-206ENST00000490831 LYSTQ99698 3801 aa11.14□□□□□ -0.63
COL27A1-206ENST00000490831 AGRNO00468 2067 aa11.13□□□□□ -0.63
COL27A1-206ENST00000490831 A0A0J9YWU9 116 aa11.13□□□□□ -0.63
COL27A1-206ENST00000490831 FAM240BA0A1B0GVZ2 78 aa11.13□□□□□ -0.63
COL27A1-206ENST00000490831 MBPP02686 304 aaPredicted RBP11.13□□□□□ -0.63
COL27A1-206ENST00000490831 GIG44P09565 113 aaPredicted RBP11.13□□□□□ -0.63
COL27A1-206ENST00000490831 H2AFB2P0C5Z0 115 aa11.13□□□□□ -0.63
COL27A1-206ENST00000490831 SNRPD3P62318 126 aaKnown RBP11.13□□□□□ -0.63
COL27A1-206ENST00000490831 DLK1P80370 383 aa11.13□□□□□ -0.63
COL27A1-206ENST00000490831 MZT2BQ6NZ67 158 aa11.13□□□□□ -0.63
COL27A1-206ENST00000490831 SEC22CQ9BRL7 303 aa11.13□□□□□ -0.63
COL27A1-206ENST00000490831 WDR12Q9GZL7 423 aaKnown RBP11.13□□□□□ -0.63
COL27A1-206ENST00000490831 LCE6AA0A183 80 aa11.12□□□□□ -0.63
COL27A1-206ENST00000490831 UPK1BO75841 260 aa11.12□□□□□ -0.63
COL27A1-206ENST00000490831 CA1P00915 261 aaPredicted RBP11.12□□□□□ -0.63
COL27A1-206ENST00000490831 SPP1P10451 314 aa11.12□□□□□ -0.63
COL27A1-206ENST00000490831 EWSR1Q01844 656 aaKnown RBP eCLIP11.12□□□□□ -0.63
COL27A1-206ENST00000490831 AKR1C1Q04828 323 aa11.12□□□□□ -0.63
COL27A1-206ENST00000490831 TMEM41BQ5BJD5 291 aa11.12□□□□□ -0.63
COL27A1-206ENST00000490831 PSMG4Q5JS54 123 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms