RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663		L7N2F9	121 aa		13.87	□□□□□ -0.19
C4A-256	ENST00000490663	TSPAN4	O14817	238 aa		13.87	□□□□□ -0.19
C4A-256	ENST00000490663	RD3L	P0DJH9	198 aa		13.87	□□□□□ -0.19
C4A-256	ENST00000490663	NPPC	P23582	126 aa		13.87	□□□□□ -0.19
C4A-256	ENST00000490663	VAMP2	P63027	116 aa		13.87	□□□□□ -0.19
C4A-256	ENST00000490663	ARL16	Q0P5N6	197 aa		13.87	□□□□□ -0.19
C4A-256	ENST00000490663	RAB32	Q13637	225 aa		13.87	□□□□□ -0.19
C4A-256	ENST00000490663	LAMTOR1	Q6IAA8	161 aa		13.87	□□□□□ -0.19
C4A-256	ENST00000490663	TMEM14EP	Q6UXP3	125 aa		13.87	□□□□□ -0.19
C4A-256	ENST00000490663	WFDC3	Q8IUB2	231 aa		13.87	□□□□□ -0.19
C4A-256	ENST00000490663	RAB40C	Q96S21	281 aa		13.87	□□□□□ -0.19
C4A-256	ENST00000490663	PRAF2	O60831	178 aa		13.86	□□□□□ -0.19
C4A-256	ENST00000490663	GATA2	P23769	480 aa	Predicted RBP	13.86	□□□□□ -0.19
C4A-256	ENST00000490663	CRYBB3	P26998	211 aa		13.86	□□□□□ -0.19
C4A-256	ENST00000490663	P2RY1	P47900	373 aa		13.86	□□□□□ -0.19
C4A-256	ENST00000490663	LYZ	P61626	148 aa		13.86	□□□□□ -0.19
C4A-256	ENST00000490663	ZNF124	Q15973	351 aa		13.86	□□□□□ -0.19
C4A-256	ENST00000490663	FAM90A2P	Q658T7	463 aa		13.86	□□□□□ -0.19
C4A-256	ENST00000490663	THAP8	Q8NA92	274 aa		13.86	□□□□□ -0.19
C4A-256	ENST00000490663	SPAG8	Q99932	426 aa	Predicted RBP	13.86	□□□□□ -0.19
C4A-256	ENST00000490663	C11orf1	Q9H5F2	150 aa		13.86	□□□□□ -0.19
C4A-256	ENST00000490663	FAM24A	A6NFZ4	105 aa		13.85	□□□□□ -0.19
C4A-256	ENST00000490663	SNRPGP15	A8MWD9	76 aa		13.85	□□□□□ -0.19
C4A-256	ENST00000490663	TSC22D2	O75157	780 aa		13.85	□□□□□ -0.19
C4A-256	ENST00000490663	HNRNPC	P07910	306 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
C4A-256	ENST00000490663	BCAP31	P51572	246 aa		13.85	□□□□□ -0.19
C4A-256	ENST00000490663	RPL11	P62913	178 aa	Known RBP	13.85	□□□□□ -0.19
C4A-256	ENST00000490663	ODF3L2	Q3SX64	289 aa		13.85	□□□□□ -0.19
C4A-256	ENST00000490663	TMEM182	Q6ZP80	229 aa	Predicted RBP	13.85	□□□□□ -0.19
C4A-256	ENST00000490663	RNF125	Q96EQ8	232 aa		13.85	□□□□□ -0.19
C4A-256	ENST00000490663	CITED4	Q96RK1	184 aa		13.85	□□□□□ -0.19
C4A-256	ENST00000490663	HUWE1	Q7Z6Z7	4374 aa	Known RBP	13.85	□□□□□ -0.19
C4A-256	ENST00000490663	RBMY1B	A6NDE4	496 aa	Known RBP	13.84	□□□□□ -0.19
C4A-256	ENST00000490663	RBMY1E	A6NEQ0	496 aa	Known RBP	13.84	□□□□□ -0.19
C4A-256	ENST00000490663	SSNA1	O43805	119 aa		13.84	□□□□□ -0.19
C4A-256	ENST00000490663	RBMY1D	P0C7P1	496 aa	Known RBP	13.84	□□□□□ -0.19
C4A-256	ENST00000490663	IL15RA	Q13261	267 aa		13.84	□□□□□ -0.19
C4A-256	ENST00000490663	FAM24B	Q8N5W8	94 aa		13.84	□□□□□ -0.19
C4A-256	ENST00000490663	TRGV9	Q99603	122 aa		13.84	□□□□□ -0.19
C4A-256	ENST00000490663	RETN	Q9HD89	108 aa		13.84	□□□□□ -0.19
C4A-256	ENST00000490663	CST7	O76096	145 aa		13.83	□□□□□ -0.2
C4A-256	ENST00000490663	CAV2	P51636	162 aa		13.83	□□□□□ -0.2
C4A-256	ENST00000490663	LRRC37A5P	Q49AS3	106 aa		13.83	□□□□□ -0.2
C4A-256	ENST00000490663	STXBP6	Q8NFX7	210 aa		13.83	□□□□□ -0.2
C4A-256	ENST00000490663	MS4A6A	Q9H2W1	248 aa		13.83	□□□□□ -0.2
C4A-256	ENST00000490663	RABAC1	Q9UI14	185 aa		13.83	□□□□□ -0.2
C4A-256	ENST00000490663	ALG5	Q9Y673	324 aa		13.83	□□□□□ -0.2
C4A-256	ENST00000490663		U3KQE9	123 aa		13.83	□□□□□ -0.2
C4A-256	ENST00000490663	STAB2	Q8WWQ8	2551 aa		13.82	□□□□□ -0.2
C4A-256	ENST00000490663	IGSF23	A1L1A6	192 aa		13.82	□□□□□ -0.2
C4A-256	ENST00000490663	OR4C46	A6NHA9	309 aa		13.82	□□□□□ -0.2
C4A-256	ENST00000490663		A8MZ25	164 aa		13.82	□□□□□ -0.2
C4A-256	ENST00000490663	TAS2R30	P59541	319 aa		13.82	□□□□□ -0.2
C4A-256	ENST00000490663	DLK1	P80370	383 aa		13.82	□□□□□ -0.2
C4A-256	ENST00000490663	HAGH	Q16775	308 aa		13.82	□□□□□ -0.2
C4A-256	ENST00000490663	APRG1	Q8IVJ8	170 aa		13.82	□□□□□ -0.2
C4A-256	ENST00000490663	STPG3	Q8N7X2	389 aa		13.82	□□□□□ -0.2
C4A-256	ENST00000490663	TMEM231	Q9H6L2	316 aa		13.82	□□□□□ -0.2
C4A-256	ENST00000490663	MGAT4C	Q9UBM8	478 aa		13.82	□□□□□ -0.2
C4A-256	ENST00000490663	PTTG1	O95997	202 aa		13.81	□□□□□ -0.2
C4A-256	ENST00000490663	BMI1	P35226	326 aa		13.81	□□□□□ -0.2
C4A-256	ENST00000490663	H2BFS	P57053	126 aa		13.81	□□□□□ -0.2
C4A-256	ENST00000490663	C16orf54	Q6UWD8	224 aa		13.81	□□□□□ -0.2
C4A-256	ENST00000490663	TMEM217	Q8N7C4	229 aa		13.81	□□□□□ -0.2
C4A-256	ENST00000490663	OR10P1	Q8NGE3	313 aa		13.81	□□□□□ -0.2
C4A-256	ENST00000490663	GLMP	Q8WWB7	406 aa		13.81	□□□□□ -0.2
C4A-256	ENST00000490663	NARS2	Q96I59	477 aa	Known RBP	13.81	□□□□□ -0.2
C4A-256	ENST00000490663	MAP6D1	Q9H9H5	199 aa		13.81	□□□□□ -0.2
C4A-256	ENST00000490663	OR5AC2	Q9NZP5	309 aa		13.81	□□□□□ -0.2
C4A-256	ENST00000490663	DOK5	Q9P104	306 aa		13.81	□□□□□ -0.2
C4A-256	ENST00000490663		A0A1W2PS18	150 aa		13.8	□□□□□ -0.2
C4A-256	ENST00000490663	DNASE2	O00115	360 aa	Predicted RBP	13.8	□□□□□ -0.2
C4A-256	ENST00000490663	SLC38A11	Q08AI6	406 aa		13.8	□□□□□ -0.2
C4A-256	ENST00000490663	TMEM144	Q7Z5S9	345 aa		13.8	□□□□□ -0.2
C4A-256	ENST00000490663	PVALB	P20472	110 aa	Predicted RBP	13.79	□□□□□ -0.2
C4A-256	ENST00000490663	EIF2B2	P49770	351 aa	Known RBP	13.79	□□□□□ -0.2
C4A-256	ENST00000490663	LINC00322	Q6ZN03	302 aa	Predicted RBP	13.79	□□□□□ -0.2
C4A-256	ENST00000490663	CYP2G1P	Q6ZSU1	146 aa		13.79	□□□□□ -0.2
C4A-256	ENST00000490663	GRAMD2B	Q96HH9	432 aa		13.79	□□□□□ -0.2
C4A-256	ENST00000490663	FAM110A	Q9BQ89	295 aa		13.79	□□□□□ -0.2
C4A-256	ENST00000490663		U3KQK5	164 aa		13.79	□□□□□ -0.2
C4A-256	ENST00000490663		H0YIZ8	118 aa		13.78	□□□□□ -0.2
C4A-256	ENST00000490663	BUB3	O43684	328 aa		13.78	□□□□□ -0.2
C4A-256	ENST00000490663	FABP1	P07148	127 aa		13.78	□□□□□ -0.2
C4A-256	ENST00000490663	NHLRC4	P0CG21	123 aa	Predicted RBP	13.78	□□□□□ -0.2
C4A-256	ENST00000490663	RPL35A	P18077	110 aa	Known RBP	13.78	□□□□□ -0.2
C4A-256	ENST00000490663	PPP1R14B	Q96C90	147 aa		13.78	□□□□□ -0.2
C4A-256	ENST00000490663	RCHY1	Q96PM5	261 aa		13.78	□□□□□ -0.2
C4A-256	ENST00000490663	LYRM2	Q9NU23	88 aa	Predicted RBP	13.78	□□□□□ -0.2
C4A-256	ENST00000490663	DEDD	O75618	318 aa		13.77	□□□□□ -0.21
C4A-256	ENST00000490663	ZNF688	P0C7X2	276 aa		13.77	□□□□□ -0.21
C4A-256	ENST00000490663	ORM2	P19652	201 aa		13.77	□□□□□ -0.21
C4A-256	ENST00000490663	PAFAH1B2	P68402	229 aa		13.77	□□□□□ -0.21
C4A-256	ENST00000490663	LEMD1	Q68G75	181 aa		13.77	□□□□□ -0.21
C4A-256	ENST00000490663	SIGLEC15	Q6ZMC9	328 aa		13.77	□□□□□ -0.21
C4A-256	ENST00000490663	TMEM252	Q8N6L7	170 aa		13.77	□□□□□ -0.21
C4A-256	ENST00000490663	BPIFC	Q8NFQ6	507 aa		13.77	□□□□□ -0.21
C4A-256	ENST00000490663	OR1B1	Q8NGR6	318 aa		13.77	□□□□□ -0.21
C4A-256	ENST00000490663	TM2D3	Q9BRN9	247 aa		13.77	□□□□□ -0.21
C4A-256	ENST00000490663	NMES1	Q9C002	83 aa		13.77	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms