RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 OR5AL1P0C617 328 aa11.68□□□□□ -0.54
ARHGEF39-205ENST00000490638 RELBQ01201 579 aa11.68□□□□□ -0.54
ARHGEF39-205ENST00000490638 NMSQ5H8A3 153 aa11.68□□□□□ -0.54
ARHGEF39-205ENST00000490638 FAM74A4Q5TZK3 123 aa11.68□□□□□ -0.54
ARHGEF39-205ENST00000490638 OR4D5Q8NGN0 318 aa11.68□□□□□ -0.54
ARHGEF39-205ENST00000490638 IGLV3-1P01715 115 aa11.68□□□□□ -0.54
ARHGEF39-205ENST00000490638 C2orf83Q53S99 150 aa11.68□□□□□ -0.54
ARHGEF39-205ENST00000490638 RARRES2Q99969 163 aa11.68□□□□□ -0.54
ARHGEF39-205ENST00000490638 A0A1B0GWJ7 208 aa11.67□□□□□ -0.54
ARHGEF39-205ENST00000490638 EMP1P54849 157 aa11.67□□□□□ -0.54
ARHGEF39-205ENST00000490638 STHQ8IWL8 128 aa11.67□□□□□ -0.54
ARHGEF39-205ENST00000490638 TMEM116Q8NCL8 245 aa11.67□□□□□ -0.54
ARHGEF39-205ENST00000490638 GLMPQ8WWB7 406 aa11.67□□□□□ -0.54
ARHGEF39-205ENST00000490638 CTSZQ9UBR2 303 aa11.67□□□□□ -0.54
ARHGEF39-205ENST00000490638 YTHDF2Q9Y5A9 579 aaKnown RBP11.67□□□□□ -0.54
ARHGEF39-205ENST00000490638 RPL29P47914 159 aaKnown RBP11.67□□□□□ -0.54
ARHGEF39-205ENST00000490638 C17orf58Q2M2W7 97 aa11.67□□□□□ -0.54
ARHGEF39-205ENST00000490638 ZNF705AQ6ZN79 300 aaPredicted RBP11.67□□□□□ -0.54
ARHGEF39-205ENST00000490638 F11RQ9Y624 299 aaKnown RBP11.67□□□□□ -0.54
ARHGEF39-205ENST00000490638 SPEGQ15772 3267 aa11.67□□□□□ -0.54
ARHGEF39-205ENST00000490638 PRRC2CQ9Y520 2896 aaKnown RBP11.67□□□□□ -0.54
ARHGEF39-205ENST00000490638 IGHV2-70P01814 119 aa11.67□□□□□ -0.54
ARHGEF39-205ENST00000490638 SPSB3Q6PJ21 355 aa11.67□□□□□ -0.54
ARHGEF39-205ENST00000490638 PARLQ9H300 379 aa11.67□□□□□ -0.54
ARHGEF39-205ENST00000490638 USMG5Q96IX5 58 aa11.66□□□□□ -0.54
ARHGEF39-205ENST00000490638 TRIOO75962 3097 aa11.66□□□□□ -0.54
ARHGEF39-205ENST00000490638 PSG1P11464 419 aa11.66□□□□□ -0.54
ARHGEF39-205ENST00000490638 CBLN2Q8IUK8 224 aa11.66□□□□□ -0.54
ARHGEF39-205ENST00000490638 CD33P20138 364 aa11.66□□□□□ -0.54
ARHGEF39-205ENST00000490638 RPS20P60866 119 aaKnown RBP11.66□□□□□ -0.54
ARHGEF39-205ENST00000490638 RNF212Q495C1 297 aa11.66□□□□□ -0.54
ARHGEF39-205ENST00000490638 EYSQ5T1H1 3165 aa11.65□□□□□ -0.54
ARHGEF39-205ENST00000490638 TMEM250H0YL14 139 aa11.65□□□□□ -0.54
ARHGEF39-205ENST00000490638 HTN3P15516 51 aa11.65□□□□□ -0.54
ARHGEF39-205ENST00000490638 GTSCR1Q86UQ5 136 aa11.65□□□□□ -0.54
ARHGEF39-205ENST00000490638 C11orf53Q8IXP5 236 aa11.65□□□□□ -0.54
ARHGEF39-205ENST00000490638 DUX3Q96PT4 197 aa11.65□□□□□ -0.54
ARHGEF39-205ENST00000490638 LINC01587Q99440 93 aa11.65□□□□□ -0.54
ARHGEF39-205ENST00000490638 SLC50A1Q9BRV3 221 aa11.65□□□□□ -0.54
ARHGEF39-205ENST00000490638 FOSL1P15407 271 aa11.65□□□□□ -0.54
ARHGEF39-205ENST00000490638 CENPWQ5EE01 88 aa11.65□□□□□ -0.54
ARHGEF39-205ENST00000490638 TCF24Q7RTU0 167 aa11.65□□□□□ -0.54
ARHGEF39-205ENST00000490638 ZNF843Q8N446 348 aa11.65□□□□□ -0.54
ARHGEF39-205ENST00000490638 CD99P14209 185 aa11.65□□□□□ -0.54
ARHGEF39-205ENST00000490638 SNRPEP62304 92 aaKnown RBP11.65□□□□□ -0.54
ARHGEF39-205ENST00000490638 GPR82Q96P67 336 aa11.65□□□□□ -0.54
ARHGEF39-205ENST00000490638 GSX1Q9H4S2 264 aaPredicted RBP11.65□□□□□ -0.54
ARHGEF39-205ENST00000490638 ATP6V0E1O15342 81 aa11.64□□□□□ -0.55
ARHGEF39-205ENST00000490638 Q9H3A6 140 aa11.64□□□□□ -0.55
ARHGEF39-205ENST00000490638 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.64□□□□□ -0.55
ARHGEF39-205ENST00000490638 E9PQ18 207 aa11.64□□□□□ -0.55
ARHGEF39-205ENST00000490638 G3V318 75 aa11.64□□□□□ -0.55
ARHGEF39-205ENST00000490638 PYYP10082 97 aa11.64□□□□□ -0.55
ARHGEF39-205ENST00000490638 FAM3BP58499 235 aaPredicted RBP11.64□□□□□ -0.55
ARHGEF39-205ENST00000490638 SPRNQ5BIV9 151 aa11.64□□□□□ -0.55
ARHGEF39-205ENST00000490638 DEFB121Q5J5C9 76 aa11.64□□□□□ -0.55
ARHGEF39-205ENST00000490638 TREML4Q6UXN2 200 aa11.64□□□□□ -0.55
ARHGEF39-205ENST00000490638 PGLYRP4Q96LB8 373 aa11.64□□□□□ -0.55
ARHGEF39-205ENST00000490638 CDC42EP3Q9UKI2 254 aa11.64□□□□□ -0.55
ARHGEF39-205ENST00000490638 KIAA1549LQ6ZVL6 1849 aa11.64□□□□□ -0.55
ARHGEF39-205ENST00000490638 USP34Q70CQ2 3546 aa11.64□□□□□ -0.55
ARHGEF39-205ENST00000490638 CKS2P33552 79 aa11.64□□□□□ -0.55
ARHGEF39-205ENST00000490638 EML6Q6ZMW3 1958 aa11.64□□□□□ -0.55
ARHGEF39-205ENST00000490638 PEX7O00628 323 aa11.64□□□□□ -0.55
ARHGEF39-205ENST00000490638 GCGP01275 180 aa11.64□□□□□ -0.55
ARHGEF39-205ENST00000490638 CFPP27918 469 aa11.64□□□□□ -0.55
ARHGEF39-205ENST00000490638 Q6ZRM9 215 aa11.64□□□□□ -0.55
ARHGEF39-205ENST00000490638 C10orf105Q8TEF2 133 aa11.64□□□□□ -0.55
ARHGEF39-205ENST00000490638 LINC00518Q8N0U6 118 aa11.63□□□□□ -0.55
ARHGEF39-205ENST00000490638 OR5AN1Q8NGI8 311 aa11.63□□□□□ -0.55
ARHGEF39-205ENST00000490638 NPIPB6E9PJ23 425 aa11.63□□□□□ -0.55
ARHGEF39-205ENST00000490638 CNTFRP26992 372 aa11.63□□□□□ -0.55
ARHGEF39-205ENST00000490638 TRBV7-1A0A0A6YYK4 115 aa11.63□□□□□ -0.55
ARHGEF39-205ENST00000490638 A0A0G2JRQ6 117 aa11.63□□□□□ -0.55
ARHGEF39-205ENST00000490638 A0A1W2PPI3 338 aa11.63□□□□□ -0.55
ARHGEF39-205ENST00000490638 M0R381 172 aa11.63□□□□□ -0.55
ARHGEF39-205ENST00000490638 ZNF688P0C7X2 276 aa11.63□□□□□ -0.55
ARHGEF39-205ENST00000490638 RPL15P61313 204 aaKnown RBP11.63□□□□□ -0.55
ARHGEF39-205ENST00000490638 GCSAMLQ5JQS6 135 aa11.63□□□□□ -0.55
ARHGEF39-205ENST00000490638 LINC00311Q8N616 119 aa11.63□□□□□ -0.55
ARHGEF39-205ENST00000490638 PSMG4Q5JS54 123 aa11.62□□□□□ -0.55
ARHGEF39-205ENST00000490638 AMMECR1LQ6DCA0 310 aa11.62□□□□□ -0.55
ARHGEF39-205ENST00000490638 CBY3A6NI87 242 aa11.62□□□□□ -0.55
ARHGEF39-205ENST00000490638 OVOL3O00110 214 aa11.62□□□□□ -0.55
ARHGEF39-205ENST00000490638 TCAPO15273 167 aa11.62□□□□□ -0.55
ARHGEF39-205ENST00000490638 TCF21O43680 179 aa11.62□□□□□ -0.55
ARHGEF39-205ENST00000490638 DUSP14O95147 198 aaKnown RBP11.62□□□□□ -0.55
ARHGEF39-205ENST00000490638 APCSP02743 223 aa11.62□□□□□ -0.55
ARHGEF39-205ENST00000490638 TRGC1P0CF51 173 aa11.62□□□□□ -0.55
ARHGEF39-205ENST00000490638 MDKP21741 143 aaPredicted RBP11.62□□□□□ -0.55
ARHGEF39-205ENST00000490638 SYNJ2BPP57105 145 aa11.62□□□□□ -0.55
ARHGEF39-205ENST00000490638 PEF1Q9UBV8 284 aaKnown RBP11.62□□□□□ -0.55
ARHGEF39-205ENST00000490638 C1orf122Q6ZSJ8 110 aa11.62□□□□□ -0.55
ARHGEF39-205ENST00000490638 DTX2Q86UW9 622 aa11.62□□□□□ -0.55
ARHGEF39-205ENST00000490638 LOC389332A0A1B0GUA5 103 aa11.62□□□□□ -0.55
ARHGEF39-205ENST00000490638 C15orf65H3BRN8 121 aa11.62□□□□□ -0.55
ARHGEF39-205ENST00000490638 ATP5G3P48201 142 aa11.62□□□□□ -0.55
ARHGEF39-205ENST00000490638 ZNF56Q15929 161 aa11.62□□□□□ -0.55
ARHGEF39-205ENST00000490638 MLANAQ16655 118 aa11.62□□□□□ -0.55
ARHGEF39-205ENST00000490638 DEFB112Q30KQ8 113 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms